RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 LIMA1Q9UHB6 759 aaKnown RBP18.2■□□□□ 0.5
HLA-A-208ENST00000496081 SOWAHBA6NEL2 793 aa18.19■□□□□ 0.5
HLA-A-208ENST00000496081 KCNJ18B7U540 433 aa18.19■□□□□ 0.5
HLA-A-208ENST00000496081 KCNA2P16389 499 aa18.19■□□□□ 0.5
HLA-A-208ENST00000496081 COPB2P35606 906 aa18.19■□□□□ 0.5
HLA-A-208ENST00000496081 JAK3P52333 1124 aa18.19■□□□□ 0.5
HLA-A-208ENST00000496081 FSTL1Q12841 308 aa18.19■□□□□ 0.5
HLA-A-208ENST00000496081 KCNJ12Q14500 433 aa18.19■□□□□ 0.5
HLA-A-208ENST00000496081 ARID5BQ14865 1188 aa18.19■□□□□ 0.5
HLA-A-208ENST00000496081 STXBP2Q15833 593 aa18.19■□□□□ 0.5
HLA-A-208ENST00000496081 GNPTABQ3T906 1256 aa18.19■□□□□ 0.5
HLA-A-208ENST00000496081 TCP11X2Q5H9J9 407 aa18.19■□□□□ 0.5
HLA-A-208ENST00000496081 C1orf186Q6ZWK4 172 aa18.19■□□□□ 0.5
HLA-A-208ENST00000496081 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.19■□□□□ 0.5
HLA-A-208ENST00000496081 FAM133AQ8N9E0 248 aa18.19■□□□□ 0.5
HLA-A-208ENST00000496081 CACTINQ8WUQ7 758 aaKnown RBP18.19■□□□□ 0.5
HLA-A-208ENST00000496081 CTAGE1Q96RT6 745 aa18.19■□□□□ 0.5
HLA-A-208ENST00000496081 FGFBP2Q9BYJ0 223 aa18.19■□□□□ 0.5
HLA-A-208ENST00000496081 THAP9Q9H5L6 903 aa18.19■□□□□ 0.5
HLA-A-208ENST00000496081 ZSWIM4Q9H7M6 989 aa18.19■□□□□ 0.5
HLA-A-208ENST00000496081 TBC1D7Q9P0N9 293 aa18.19■□□□□ 0.5
HLA-A-208ENST00000496081 ADD3Q9UEY8 706 aaKnown RBP18.19■□□□□ 0.5
HLA-A-208ENST00000496081 PNMA3Q9UL41 463 aa18.19■□□□□ 0.5
HLA-A-208ENST00000496081 LOXHD1Q8IVV2 1947 aa18.19■□□□□ 0.5
HLA-A-208ENST00000496081 CCL15-CCL14A0A0B4J2E2 113 aa18.19■□□□□ 0.5
HLA-A-208ENST00000496081 SPATA31C2B4DYI2 1134 aa18.19■□□□□ 0.5
HLA-A-208ENST00000496081 EIF3JO75822 258 aaKnown RBP18.19■□□□□ 0.5
HLA-A-208ENST00000496081 SFNP31947 248 aa18.19■□□□□ 0.5
HLA-A-208ENST00000496081 QARSP47897 775 aaKnown RBP18.19■□□□□ 0.5
HLA-A-208ENST00000496081 LRMPQ12912 555 aa18.19■□□□□ 0.5
HLA-A-208ENST00000496081 KRT31Q15323 416 aa18.19■□□□□ 0.5
HLA-A-208ENST00000496081 CCL15Q16663 113 aa18.19■□□□□ 0.5
HLA-A-208ENST00000496081 PTPN21Q16825 1174 aa18.19■□□□□ 0.5
HLA-A-208ENST00000496081 CST9Q5W186 159 aa18.19■□□□□ 0.5
HLA-A-208ENST00000496081 MYOCDQ8IZQ8 938 aa18.19■□□□□ 0.5
HLA-A-208ENST00000496081 CSGALNACT2Q8N6G5 542 aa18.19■□□□□ 0.5
HLA-A-208ENST00000496081 CDHR1Q96JP9 859 aa18.19■□□□□ 0.5
HLA-A-208ENST00000496081 ZHX3Q9H4I2 956 aa18.19■□□□□ 0.5
HLA-A-208ENST00000496081 WDR64B1ANS9 1081 aa18.18■□□□□ 0.5
HLA-A-208ENST00000496081 RSPH10B2B2RC85 870 aa18.18■□□□□ 0.5
HLA-A-208ENST00000496081 BTBD19C9JJ37 291 aa18.18■□□□□ 0.5
HLA-A-208ENST00000496081 PDHXO00330 501 aa18.18■□□□□ 0.5
HLA-A-208ENST00000496081 RSPH10BP0C881 870 aa18.18■□□□□ 0.5
HLA-A-208ENST00000496081 ERVK-9P63128 1117 aa18.18■□□□□ 0.5
HLA-A-208ENST00000496081 ERVK-24P63145 666 aa18.18■□□□□ 0.5
HLA-A-208ENST00000496081 ZNF746Q6NUN9 644 aaPredicted RBP18.18■□□□□ 0.5
HLA-A-208ENST00000496081 LRRC8AQ8IWT6 810 aa18.18■□□□□ 0.5
HLA-A-208ENST00000496081 NOC3LQ8WTT2 800 aaKnown RBP18.18■□□□□ 0.5
HLA-A-208ENST00000496081 BRI3BPQ8WY22 251 aa18.18■□□□□ 0.5
HLA-A-208ENST00000496081 SENP7Q9BQF6 1050 aa18.18■□□□□ 0.5
HLA-A-208ENST00000496081 BCAS3Q9H6U6 928 aa18.18■□□□□ 0.5
HLA-A-208ENST00000496081 SLC45A1Q9Y2W3 748 aa18.18■□□□□ 0.5
HLA-A-208ENST00000496081 TEX33O43247 280 aa18.17■□□□□ 0.5
HLA-A-208ENST00000496081 LYPLA2O95372 231 aa18.17■□□□□ 0.5
HLA-A-208ENST00000496081 ITGBL1O95965 494 aaPredicted RBP18.17■□□□□ 0.5
HLA-A-208ENST00000496081 EDNRBP24530 442 aa18.17■□□□□ 0.5
HLA-A-208ENST00000496081 GSDMDP57764 484 aa18.17■□□□□ 0.5
HLA-A-208ENST00000496081 UGCGQ16739 394 aa18.17■□□□□ 0.5
HLA-A-208ENST00000496081 SPRYD7Q5W111 196 aa18.17■□□□□ 0.5
HLA-A-208ENST00000496081 RTN4Q9NQC3 1192 aaKnown RBP18.17■□□□□ 0.5
HLA-A-208ENST00000496081 TCEAL9Q9UHQ7 104 aa18.17■□□□□ 0.5
HLA-A-208ENST00000496081 NFASCO94856 1347 aa18.17■□□□□ 0.5
HLA-A-208ENST00000496081 DOCK5Q9H7D0 1870 aa18.17■□□□□ 0.5
HLA-A-208ENST00000496081 TOMM70O94826 608 aa18.17■□□□□ 0.5
HLA-A-208ENST00000496081 EEF1GP26641 437 aaKnown RBP18.17■□□□□ 0.5
HLA-A-208ENST00000496081 ICAM3P32942 547 aa18.17■□□□□ 0.5
HLA-A-208ENST00000496081 FILIP1LQ4L180 1135 aa18.17■□□□□ 0.5
HLA-A-208ENST00000496081 SFR1Q86XK3 245 aa18.17■□□□□ 0.5
HLA-A-208ENST00000496081 ANKRD20A12PQ8NF67 263 aa18.17■□□□□ 0.5
HLA-A-208ENST00000496081 RDM1Q8NG50 284 aa18.17■□□□□ 0.5
HLA-A-208ENST00000496081 GTF3C2Q8WUA4 911 aaPredicted RBP18.17■□□□□ 0.5
HLA-A-208ENST00000496081 EEF2KMTQ96G04 330 aa18.17■□□□□ 0.5
HLA-A-208ENST00000496081 MROH8Q9H579 483 aa18.17■□□□□ 0.5
HLA-A-208ENST00000496081 POLD4Q9HCU8 107 aa18.17■□□□□ 0.5
HLA-A-208ENST00000496081 KCND2Q9NZV8 630 aa18.17■□□□□ 0.5
HLA-A-208ENST00000496081 TBCAO75347 108 aaKnown RBP18.16■□□□□ 0.5
HLA-A-208ENST00000496081 PGK2P07205 417 aa18.16■□□□□ 0.5
HLA-A-208ENST00000496081 ZBTB48P10074 688 aaPredicted RBP18.16■□□□□ 0.5
HLA-A-208ENST00000496081 COPB1P53618 953 aaKnown RBP18.16■□□□□ 0.5
HLA-A-208ENST00000496081 SP2Q02086 613 aa18.16■□□□□ 0.5
HLA-A-208ENST00000496081 LRRC63Q05C16 580 aa18.16■□□□□ 0.5
HLA-A-208ENST00000496081 FOXR2Q6PJQ5 311 aa18.16■□□□□ 0.5
HLA-A-208ENST00000496081 ANKRD23Q86SG2 305 aa18.16■□□□□ 0.5
HLA-A-208ENST00000496081 CREBRFQ8IUR6 639 aa18.16■□□□□ 0.5
HLA-A-208ENST00000496081 C4orf19Q8IY42 314 aa18.16■□□□□ 0.5
HLA-A-208ENST00000496081 SHCBP1Q8NEM2 672 aa18.16■□□□□ 0.5
HLA-A-208ENST00000496081 SMCR8Q8TEV9 937 aaPredicted RBP18.16■□□□□ 0.5
HLA-A-208ENST00000496081 SCFD1Q8WVM8 642 aa18.16■□□□□ 0.5
HLA-A-208ENST00000496081 VPS16Q9H269 839 aa18.16■□□□□ 0.5
HLA-A-208ENST00000496081 TAB2Q9NYJ8 693 aa18.16■□□□□ 0.5
HLA-A-208ENST00000496081 DBR1Q9UK59 544 aaKnown RBP18.16■□□□□ 0.5
HLA-A-208ENST00000496081 PYCARDQ9ULZ3 195 aa18.16■□□□□ 0.5
HLA-A-208ENST00000496081 PCDHA10Q9Y5I2 948 aa18.16■□□□□ 0.5
HLA-A-208ENST00000496081 COL4A3BPQ9Y5P4 624 aa18.16■□□□□ 0.5
HLA-A-208ENST00000496081 DNAJC25-GNG10A0A024R161 153 aa18.15■□□□□ 0.5
HLA-A-208ENST00000496081 ARHGEF35A5YM69 484 aa18.15■□□□□ 0.5
HLA-A-208ENST00000496081 ZNF500O60304 480 aaPredicted RBP18.15■□□□□ 0.5
HLA-A-208ENST00000496081 CASP5P51878 434 aa18.15■□□□□ 0.5
HLA-A-208ENST00000496081 PSMC5P62195 406 aa18.15■□□□□ 0.5
HLA-A-208ENST00000496081 KCTD2Q14681 263 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms