RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 XRRA1Q6P2D8 792 aa15.55■□□□□ 0.08
COL1A1-209ENST00000495677 ADGRD2Q7Z7M1 963 aa15.55■□□□□ 0.08
COL1A1-209ENST00000495677 RTN4RL1Q86UN2 441 aaPredicted RBP15.55■□□□□ 0.08
COL1A1-209ENST00000495677 FCHSD1Q86WN1 690 aa15.55■□□□□ 0.08
COL1A1-209ENST00000495677 GIMAP8Q8ND71 665 aaPredicted RBP15.55■□□□□ 0.08
COL1A1-209ENST00000495677 POF1BQ8WVV4 589 aa15.55■□□□□ 0.08
COL1A1-209ENST00000495677 ZFP91Q96JP5 570 aaPredicted RBP15.55■□□□□ 0.08
COL1A1-209ENST00000495677 CNNM2Q9H8M5 875 aa15.55■□□□□ 0.08
COL1A1-209ENST00000495677 SPTBN4Q9H254 2564 aa15.54■□□□□ 0.08
COL1A1-209ENST00000495677 GLP2RO95838 553 aa15.54■□□□□ 0.08
COL1A1-209ENST00000495677 TRIM50Q86XT4 487 aa15.54■□□□□ 0.08
COL1A1-209ENST00000495677 NPAS4Q8IUM7 802 aa15.54■□□□□ 0.08
COL1A1-209ENST00000495677 KLHL23Q8NBE8 558 aa15.54■□□□□ 0.08
COL1A1-209ENST00000495677 ATP8B4Q8TF62 1192 aa15.54■□□□□ 0.08
COL1A1-209ENST00000495677 SUSD6Q92537 303 aa15.54■□□□□ 0.08
COL1A1-209ENST00000495677 DSCC1Q9BVC3 393 aa15.54■□□□□ 0.08
COL1A1-209ENST00000495677 USP15Q9Y4E8 981 aaPredicted RBP15.54■□□□□ 0.08
COL1A1-209ENST00000495677 MRPL42Q9Y6G3 142 aaKnown RBP15.54■□□□□ 0.08
COL1A1-209ENST00000495677 FAM186AA6NE01 2351 aa15.54■□□□□ 0.08
COL1A1-209ENST00000495677 PNMA6FA0A0J9YX94 578 aa15.53■□□□□ 0.08
COL1A1-209ENST00000495677 STAG3L1P0CL83 205 aa15.53■□□□□ 0.08
COL1A1-209ENST00000495677 UBE3AQ05086 875 aa15.53■□□□□ 0.08
COL1A1-209ENST00000495677 IMMTQ16891 758 aaKnown RBP15.53■□□□□ 0.08
COL1A1-209ENST00000495677 SLC35G1Q2M3R5 365 aa15.53■□□□□ 0.08
COL1A1-209ENST00000495677 UTP14CQ5TAP6 766 aaKnown RBP15.53■□□□□ 0.08
COL1A1-209ENST00000495677 RUFY4Q6ZNE9 571 aa15.53■□□□□ 0.08
COL1A1-209ENST00000495677 UBAC1Q9BSL1 405 aa15.53■□□□□ 0.08
COL1A1-209ENST00000495677 CDY2AQ9Y6F7 541 aa15.53■□□□□ 0.08
COL1A1-209ENST00000495677 ZFHX2Q9C0A1 2572 aaPredicted RBP15.52■□□□□ 0.08
COL1A1-209ENST00000495677 CYTH3O43739 400 aa15.52■□□□□ 0.08
COL1A1-209ENST00000495677 NRIP1P48552 1158 aa15.52■□□□□ 0.08
COL1A1-209ENST00000495677 MARCH8Q5T0T0 291 aa15.52■□□□□ 0.08
COL1A1-209ENST00000495677 PCNX4Q63HM2 1172 aa15.52■□□□□ 0.08
COL1A1-209ENST00000495677 TMEM184AQ6ZMB5 413 aa15.52■□□□□ 0.08
COL1A1-209ENST00000495677 DNAJB3Q8WWF6 145 aa15.52■□□□□ 0.08
COL1A1-209ENST00000495677 LINC01599Q8WXQ3 324 aa15.52■□□□□ 0.08
COL1A1-209ENST00000495677 RILPL2Q969X0 211 aa15.52■□□□□ 0.08
COL1A1-209ENST00000495677 PIGSQ96S52 555 aa15.52■□□□□ 0.08
COL1A1-209ENST00000495677 CDCA3Q99618 268 aaPredicted RBP15.52■□□□□ 0.08
COL1A1-209ENST00000495677 AGO3Q9H9G7 860 aaKnown RBP15.52■□□□□ 0.08
COL1A1-209ENST00000495677 ERAP1Q9NZ08 941 aa15.52■□□□□ 0.08
COL1A1-209ENST00000495677 RTEL1Q9NZ71 1219 aa15.52■□□□□ 0.08
COL1A1-209ENST00000495677 TUBE1Q9UJT0 475 aa15.52■□□□□ 0.08
COL1A1-209ENST00000495677 SUPT16HQ9Y5B9 1047 aaKnown RBP15.52■□□□□ 0.08
COL1A1-209ENST00000495677 RIF1Q5UIP0 2472 aaKnown RBP15.52■□□□□ 0.07
COL1A1-209ENST00000495677 MYO15AQ9UKN7 3530 aa15.51■□□□□ 0.07
COL1A1-209ENST00000495677 TCF7P36402 384 aaPredicted RBP15.51■□□□□ 0.07
COL1A1-209ENST00000495677 VCPP55072 806 aaKnown RBP15.51■□□□□ 0.07
COL1A1-209ENST00000495677 MRPS6P82932 125 aaKnown RBP15.51■□□□□ 0.07
COL1A1-209ENST00000495677 PPFIA1Q13136 1202 aa15.51■□□□□ 0.07
COL1A1-209ENST00000495677 KCNC3Q14003 757 aa15.51■□□□□ 0.07
COL1A1-209ENST00000495677 GRIK4Q16099 956 aa15.51■□□□□ 0.07
COL1A1-209ENST00000495677 IER5Q5VY09 327 aa15.51■□□□□ 0.07
COL1A1-209ENST00000495677 PDE12Q6L8Q7 609 aaKnown RBP15.51■□□□□ 0.07
COL1A1-209ENST00000495677 SEPT1Q8WYJ6 367 aa15.51■□□□□ 0.07
COL1A1-209ENST00000495677 BARX2Q9UMQ3 279 aaPredicted RBP15.51■□□□□ 0.07
COL1A1-209ENST00000495677 TELO2Q9Y4R8 837 aa15.51■□□□□ 0.07
COL1A1-209ENST00000495677 MYH9P35579 1960 aaKnown RBP15.5■□□□□ 0.07
COL1A1-209ENST00000495677 GSTTP1A0A1W2PQM5 241 aa15.5■□□□□ 0.07
COL1A1-209ENST00000495677 RRN3P2A6NIE6 340 aa15.5■□□□□ 0.07
COL1A1-209ENST00000495677 PIK3CDO00329 1044 aa15.5■□□□□ 0.07
COL1A1-209ENST00000495677 HDAC1Q13547 482 aaPredicted RBP15.5■□□□□ 0.07
COL1A1-209ENST00000495677 GRM4Q14833 912 aa15.5■□□□□ 0.07
COL1A1-209ENST00000495677 PTPN21Q16825 1174 aa15.5■□□□□ 0.07
COL1A1-209ENST00000495677 RBM23Q86U06 439 aaKnown RBP15.5■□□□□ 0.07
COL1A1-209ENST00000495677 NLRX1Q86UT6 975 aa15.5■□□□□ 0.07
COL1A1-209ENST00000495677 HOMER1Q86YM7 354 aa15.5■□□□□ 0.07
COL1A1-209ENST00000495677 RASGRP4Q8TDF6 673 aa15.5■□□□□ 0.07
COL1A1-209ENST00000495677 ATOH1Q92858 354 aaPredicted RBP15.5■□□□□ 0.07
COL1A1-209ENST00000495677 CDHR1Q96JP9 859 aa15.5■□□□□ 0.07
COL1A1-209ENST00000495677 RPGRIP1Q96KN7 1286 aa15.5■□□□□ 0.07
COL1A1-209ENST00000495677 RIPOR3Q96MK2 946 aa15.5■□□□□ 0.07
COL1A1-209ENST00000495677 OSBPL3Q9H4L5 887 aa15.5■□□□□ 0.07
COL1A1-209ENST00000495677 SMARCAD1Q9H4L7 1026 aa15.5■□□□□ 0.07
COL1A1-209ENST00000495677 TLE6Q9H808 572 aa15.5■□□□□ 0.07
COL1A1-209ENST00000495677 IGSF9BQ9UPX0 1349 aa15.49■□□□□ 0.07
COL1A1-209ENST00000495677 KDM3AQ9Y4C1 1321 aa15.49■□□□□ 0.07
COL1A1-209ENST00000495677 WDR81Q562E7 1941 aa15.49■□□□□ 0.07
COL1A1-209ENST00000495677 CD52P31358 61 aa15.49■□□□□ 0.07
COL1A1-209ENST00000495677 DUSP6Q16828 381 aa15.49■□□□□ 0.07
COL1A1-209ENST00000495677 TNPO1Q92973 898 aaKnown RBP15.49■□□□□ 0.07
COL1A1-209ENST00000495677 GPRASP2Q96D09 838 aa15.49■□□□□ 0.07
COL1A1-209ENST00000495677 NEK1Q96PY6 1258 aa15.49■□□□□ 0.07
COL1A1-209ENST00000495677 S1PR5Q9H228 398 aa15.49■□□□□ 0.07
COL1A1-209ENST00000495677 FAM86C1Q9NVL1 165 aa15.49■□□□□ 0.07
COL1A1-209ENST00000495677 RNF216Q9NWF9 866 aaPredicted RBP15.49■□□□□ 0.07
COL1A1-209ENST00000495677 PADI3Q9ULW8 664 aa15.49■□□□□ 0.07
COL1A1-209ENST00000495677 HIP1O00291 1037 aa15.48■□□□□ 0.07
COL1A1-209ENST00000495677 MEIS2O14770 477 aa15.48■□□□□ 0.07
COL1A1-209ENST00000495677 MAFGO15525 162 aa15.48■□□□□ 0.07
COL1A1-209ENST00000495677 ATP9AO75110 1047 aa15.48■□□□□ 0.07
COL1A1-209ENST00000495677 SCG2P13521 617 aa15.48■□□□□ 0.07
COL1A1-209ENST00000495677 KCNA2P16389 499 aa15.48■□□□□ 0.07
COL1A1-209ENST00000495677 TROAPQ12815 778 aa15.48■□□□□ 0.07
COL1A1-209ENST00000495677 CWC27Q6UX04 472 aaKnown RBP15.48■□□□□ 0.07
COL1A1-209ENST00000495677 NME8Q8N427 588 aa15.48■□□□□ 0.07
COL1A1-209ENST00000495677 TLR9Q9NR96 1032 aa15.48■□□□□ 0.07
COL1A1-209ENST00000495677 AAASQ9NRG9 546 aa15.48■□□□□ 0.07
COL1A1-209ENST00000495677 PCDHB12Q9Y5F1 795 aa15.48■□□□□ 0.07
COL1A1-209ENST00000495677 PCDHA2Q9Y5H9 948 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms