RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-222ENST00000495522 CASP5P51878 434 aa16.9■□□□□ 0.3
CALD1-222ENST00000495522 POLR2FP61218 127 aaKnown RBP16.9■□□□□ 0.3
CALD1-222ENST00000495522 KNOP1Q1ED39 458 aaKnown RBP16.9■□□□□ 0.3
CALD1-222ENST00000495522 GPIHBP1Q8IV16 184 aa16.9■□□□□ 0.3
CALD1-222ENST00000495522 CYP2W1Q8TAV3 490 aa16.9■□□□□ 0.3
CALD1-222ENST00000495522 CRACR2AQ9BSW2 395 aa16.9■□□□□ 0.3
CALD1-222ENST00000495522 SPDYE2BA6NHP3 402 aa16.89■□□□□ 0.3
CALD1-222ENST00000495522 EIF3JO75822 258 aaKnown RBP16.89■□□□□ 0.3
CALD1-222ENST00000495522 EYA4O95677 639 aa16.89■□□□□ 0.3
CALD1-222ENST00000495522 SPDYE6P0CI01 402 aa16.89■□□□□ 0.3
CALD1-222ENST00000495522 PRLRP16471 622 aa16.89■□□□□ 0.3
CALD1-222ENST00000495522 CYP4A11Q02928 519 aa16.89■□□□□ 0.3
CALD1-222ENST00000495522 GFPT1Q06210 699 aaPredicted RBP16.89■□□□□ 0.3
CALD1-222ENST00000495522 FRMD5Q7Z6J6 570 aa16.89■□□□□ 0.3
CALD1-222ENST00000495522 EIF2AK1Q9BQI3 630 aaKnown RBP16.89■□□□□ 0.3
CALD1-222ENST00000495522 TMX2Q9Y320 296 aa16.89■□□□□ 0.3
CALD1-222ENST00000495522 PSME4Q14997 1843 aa16.89■□□□□ 0.29
CALD1-222ENST00000495522 IGLV3-22A0A075B6J6 115 aa16.89■□□□□ 0.29
CALD1-222ENST00000495522 PDXKO00764 312 aa16.89■□□□□ 0.29
CALD1-222ENST00000495522 ZNF185O15231 689 aa16.89■□□□□ 0.29
CALD1-222ENST00000495522 CALUO43852 315 aaPredicted RBP16.89■□□□□ 0.29
CALD1-222ENST00000495522 TLR2O60603 784 aa16.89■□□□□ 0.29
CALD1-222ENST00000495522 KCNH2Q12809 1159 aa16.89■□□□□ 0.29
CALD1-222ENST00000495522 SLC15A2Q16348 729 aa16.89■□□□□ 0.29
CALD1-222ENST00000495522 BHMT2Q9H2M3 363 aa16.89■□□□□ 0.29
CALD1-222ENST00000495522 LUC7LQ9NQ29 371 aaKnown RBP16.89■□□□□ 0.29
CALD1-222ENST00000495522 RABGAP1Q9Y3P9 1069 aa16.89■□□□□ 0.29
CALD1-222ENST00000495522 PDE2AO00408 941 aaPredicted RBP16.88■□□□□ 0.29
CALD1-222ENST00000495522 TBCAO75347 108 aaKnown RBP16.88■□□□□ 0.29
CALD1-222ENST00000495522 BMT2Q1RMZ1 405 aa16.88■□□□□ 0.29
CALD1-222ENST00000495522 RSBN1LQ6PCB5 846 aaPredicted RBP16.88■□□□□ 0.29
CALD1-222ENST00000495522 RNF10Q8N5U6 811 aaKnown RBP16.88■□□□□ 0.29
CALD1-222ENST00000495522 ACER1Q8TDN7 264 aa16.88■□□□□ 0.29
CALD1-222ENST00000495522 FAM151AQ8WW52 585 aa16.88■□□□□ 0.29
CALD1-222ENST00000495522 SUGCTQ9HAC7 445 aa16.88■□□□□ 0.29
CALD1-222ENST00000495522 RNF216Q9NWF9 866 aaPredicted RBP16.88■□□□□ 0.29
CALD1-222ENST00000495522 STK32BQ9NY57 414 aa16.88■□□□□ 0.29
CALD1-222ENST00000495522 ARMCX3Q9UH62 379 aaPredicted RBP16.88■□□□□ 0.29
CALD1-222ENST00000495522 HDAC9Q9UKV0 1011 aa16.88■□□□□ 0.29
CALD1-222ENST00000495522 CLRN2A0PK11 232 aa16.88■□□□□ 0.29
CALD1-222ENST00000495522 EML1O00423 815 aa16.88■□□□□ 0.29
CALD1-222ENST00000495522 C21orf2O43822 256 aa16.88■□□□□ 0.29
CALD1-222ENST00000495522 CFBP00751 764 aa16.88■□□□□ 0.29
CALD1-222ENST00000495522 RASSF7Q02833 373 aa16.88■□□□□ 0.29
CALD1-222ENST00000495522 CASP8Q14790 479 aa16.88■□□□□ 0.29
CALD1-222ENST00000495522 MAP9Q49MG5 647 aa16.88■□□□□ 0.29
CALD1-222ENST00000495522 KIAA1755Q5JYT7 1200 aa16.88■□□□□ 0.29
CALD1-222ENST00000495522 RUSC1Q9BVN2 902 aa16.88■□□□□ 0.29
CALD1-222ENST00000495522 GANQ9H2C0 597 aa16.88■□□□□ 0.29
CALD1-222ENST00000495522 ZCCHC17Q9NP64 241 aaKnown RBP16.88■□□□□ 0.29
CALD1-222ENST00000495522 ZNF70Q9UC06 446 aaPredicted RBP16.88■□□□□ 0.29
CALD1-222ENST00000495522 H3BQF6 201 aa16.87■□□□□ 0.29
CALD1-222ENST00000495522 GCOM1H8Y6P7 765 aaPredicted RBP16.87■□□□□ 0.29
CALD1-222ENST00000495522 POLR2MP0CAP2 368 aa16.87■□□□□ 0.29
CALD1-222ENST00000495522 MYBP10242 640 aa16.87■□□□□ 0.29
CALD1-222ENST00000495522 TCP1P17987 556 aaKnown RBP16.87■□□□□ 0.29
CALD1-222ENST00000495522 HOXD13P35453 343 aa16.87■□□□□ 0.29
CALD1-222ENST00000495522 RAPGEF1Q13905 1077 aa16.87■□□□□ 0.29
CALD1-222ENST00000495522 DLGAP5Q15398 846 aa16.87■□□□□ 0.29
CALD1-222ENST00000495522 ZNF572Q7Z3I7 529 aaPredicted RBP16.87■□□□□ 0.29
CALD1-222ENST00000495522 CREG2Q8IUH2 290 aa16.87■□□□□ 0.29
CALD1-222ENST00000495522 CHURC1Q8WUH1 139 aa16.87■□□□□ 0.29
CALD1-222ENST00000495522 DRC1Q96MC2 740 aa16.87■□□□□ 0.29
CALD1-222ENST00000495522 NOX5Q96PH1 765 aa16.87■□□□□ 0.29
CALD1-222ENST00000495522 WDR18Q9BV38 432 aa16.87■□□□□ 0.29
CALD1-222ENST00000495522 PDE11AQ9HCR9 933 aa16.87■□□□□ 0.29
CALD1-222ENST00000495522 TUFT1Q9NNX1 390 aa16.87■□□□□ 0.29
CALD1-222ENST00000495522 TYW1Q9NV66 732 aaKnown RBP16.87■□□□□ 0.29
CALD1-222ENST00000495522 RGL1Q9NZL6 768 aa16.87■□□□□ 0.29
CALD1-222ENST00000495522 AIPL1Q9NZN9 384 aa16.87■□□□□ 0.29
CALD1-222ENST00000495522 ZBTB21Q9ULJ3 1066 aa16.87■□□□□ 0.29
CALD1-222ENST00000495522 HYOU1Q9Y4L1 999 aa16.87■□□□□ 0.29
CALD1-222ENST00000495522 PRPF6O94906 941 aaKnown RBP16.87■□□□□ 0.29
CALD1-222ENST00000495522 GAP43P17677 238 aa16.87■□□□□ 0.29
CALD1-222ENST00000495522 ITIH3Q06033 890 aa16.87■□□□□ 0.29
CALD1-222ENST00000495522 GRIPAP1Q4V328 841 aa16.87■□□□□ 0.29
CALD1-222ENST00000495522 RANBP17Q9H2T7 1088 aaKnown RBP16.87■□□□□ 0.29
CALD1-222ENST00000495522 EHMT1Q9H9B1 1298 aa16.87■□□□□ 0.29
CALD1-222ENST00000495522 RSPH10B2B2RC85 870 aa16.86■□□□□ 0.29
CALD1-222ENST00000495522 AFPP02771 609 aaKnown RBP16.86■□□□□ 0.29
CALD1-222ENST00000495522 RSPH10BP0C881 870 aa16.86■□□□□ 0.29
CALD1-222ENST00000495522 RPL13P26373 211 aaKnown RBP16.86■□□□□ 0.29
CALD1-222ENST00000495522 CYP2C19P33261 490 aa16.86■□□□□ 0.29
CALD1-222ENST00000495522 APBA1Q02410 837 aa16.86■□□□□ 0.29
CALD1-222ENST00000495522 ASIC2Q16515 512 aa16.86■□□□□ 0.29
CALD1-222ENST00000495522 LRCH2Q5VUJ6 765 aa16.86■□□□□ 0.29
CALD1-222ENST00000495522 CCDC70Q6NSX1 233 aa16.86■□□□□ 0.29
CALD1-222ENST00000495522 CCDC174Q6PII3 467 aa16.86■□□□□ 0.29
CALD1-222ENST00000495522 OTOP1Q7RTM1 612 aa16.86■□□□□ 0.29
CALD1-222ENST00000495522 CCDC125Q86Z20 511 aa16.86■□□□□ 0.29
CALD1-222ENST00000495522 OSBPL9Q96SU4 736 aa16.86■□□□□ 0.29
CALD1-222ENST00000495522 HSD17B14Q9BPX1 270 aa16.86■□□□□ 0.29
CALD1-222ENST00000495522 ACBD3Q9H3P7 528 aa16.86■□□□□ 0.29
CALD1-222ENST00000495522 PLCB1Q9NQ66 1216 aa16.86■□□□□ 0.29
CALD1-222ENST00000495522 OLFML3Q9NRN5 406 aa16.86■□□□□ 0.29
CALD1-222ENST00000495522 SALL4Q9UJQ4 1053 aa16.86■□□□□ 0.29
CALD1-222ENST00000495522 SLC16A3O15427 465 aaKnown RBP16.85■□□□□ 0.29
CALD1-222ENST00000495522 PSMD10O75832 226 aa16.85■□□□□ 0.29
CALD1-222ENST00000495522 GCNT3O95395 438 aa16.85■□□□□ 0.29
CALD1-222ENST00000495522 XRCC5P13010 732 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms