RNA–Protein interactions for RNA: ENST00000494943.5

PHC3-214, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best) BASIC

Gene PHC3, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-214ENST00000494943 RAPGEF1Q13905 1077 aa6.6□□□□□ -1.35
PHC3-214ENST00000494943 FIGNQ5HY92 759 aa6.6□□□□□ -1.35
PHC3-214ENST00000494943 CCDC25Q86WR0 208 aa6.6□□□□□ -1.35
PHC3-214ENST00000494943 ERMNQ8TAM6 284 aa6.6□□□□□ -1.35
PHC3-214ENST00000494943 CNOT6LQ96LI5 555 aaKnown RBP6.6□□□□□ -1.35
PHC3-214ENST00000494943 IRX2Q9BZI1 471 aaPredicted RBP6.6□□□□□ -1.35
PHC3-214ENST00000494943 RANBP17Q9H2T7 1088 aaKnown RBP6.6□□□□□ -1.35
PHC3-214ENST00000494943 TMOD4Q9NZQ9 345 aa6.6□□□□□ -1.35
PHC3-214ENST00000494943 PACSIN2Q9UNF0 486 aaPredicted RBP6.6□□□□□ -1.35
PHC3-214ENST00000494943 R3HDM2Q9Y2K5 976 aaKnown RBP6.6□□□□□ -1.35
PHC3-214ENST00000494943 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.6□□□□□ -1.35
PHC3-214ENST00000494943 ATP6V1G1O75348 118 aa6.6□□□□□ -1.35
PHC3-214ENST00000494943 ATP5BP06576 529 aaKnown RBP6.6□□□□□ -1.35
PHC3-214ENST00000494943 STMN1P16949 149 aa6.6□□□□□ -1.35
PHC3-214ENST00000494943 EIF4A3P38919 411 aaKnown RBP6.6□□□□□ -1.35
PHC3-214ENST00000494943 ARPC4P59998 168 aa6.6□□□□□ -1.35
PHC3-214ENST00000494943 SLC34A1Q06495 639 aa6.6□□□□□ -1.35
PHC3-214ENST00000494943 PDE4DQ08499 809 aa6.6□□□□□ -1.35
PHC3-214ENST00000494943 ZC3H12AQ5D1E8 599 aaKnown RBP6.6□□□□□ -1.35
PHC3-214ENST00000494943 TCERG1LQ5VWI1 586 aa6.6□□□□□ -1.35
PHC3-214ENST00000494943 C16orf87Q6PH81 154 aa6.6□□□□□ -1.35
PHC3-214ENST00000494943 CCDC105Q8IYK2 499 aa6.6□□□□□ -1.35
PHC3-214ENST00000494943 KIRREL3Q8IZU9 778 aa6.6□□□□□ -1.35
PHC3-214ENST00000494943 MAGEB18Q96M61 343 aa6.6□□□□□ -1.35
PHC3-214ENST00000494943 NAP1L4Q99733 375 aaKnown RBP6.6□□□□□ -1.35
PHC3-214ENST00000494943 PDS5AQ29RF7 1337 aaKnown RBP6.6□□□□□ -1.35
PHC3-214ENST00000494943 LMTK3Q96Q04 1460 aa6.6□□□□□ -1.35
PHC3-214ENST00000494943 A0A087WWV3 80 aa6.6□□□□□ -1.35
PHC3-214ENST00000494943 SPDYE3A6NKU9 549 aa6.6□□□□□ -1.35
PHC3-214ENST00000494943 UQCRFS1P1P0C7P4 283 aa6.6□□□□□ -1.35
PHC3-214ENST00000494943 FECHP22830 423 aa6.6□□□□□ -1.35
PHC3-214ENST00000494943 SP100P23497 879 aaPredicted RBP6.6□□□□□ -1.35
PHC3-214ENST00000494943 RASSF7Q02833 373 aa6.6□□□□□ -1.35
PHC3-214ENST00000494943 C6orf89Q6UWU4 347 aa6.6□□□□□ -1.35
PHC3-214ENST00000494943 LRRC34Q8IZ02 419 aa6.6□□□□□ -1.35
PHC3-214ENST00000494943 SCYL3Q8IZE3 742 aa6.6□□□□□ -1.35
PHC3-214ENST00000494943 CCDC89Q8N998 374 aa6.6□□□□□ -1.35
PHC3-214ENST00000494943 PPP1R14CQ8TAE6 165 aa6.6□□□□□ -1.35
PHC3-214ENST00000494943 P2RX5Q93086 422 aa6.6□□□□□ -1.35
PHC3-214ENST00000494943 PGM2Q96G03 612 aa6.6□□□□□ -1.35
PHC3-214ENST00000494943 EPAS1Q99814 870 aa6.6□□□□□ -1.35
PHC3-214ENST00000494943 TIPINQ9BVW5 301 aa6.6□□□□□ -1.35
PHC3-214ENST00000494943 NT5C3AQ9H0P0 336 aa6.6□□□□□ -1.35
PHC3-214ENST00000494943 DPH5Q9H2P9 285 aa6.6□□□□□ -1.35
PHC3-214ENST00000494943 NDST4Q9H3R1 872 aa6.6□□□□□ -1.35
PHC3-214ENST00000494943 CABP5Q9NP86 173 aa6.6□□□□□ -1.35
PHC3-214ENST00000494943 GPR108Q9NPR9 543 aa6.6□□□□□ -1.35
PHC3-214ENST00000494943 GID8Q9NWU2 228 aa6.6□□□□□ -1.35
PHC3-214ENST00000494943 GALNT8Q9NY28 637 aa6.6□□□□□ -1.35
PHC3-214ENST00000494943 SMG5Q9UPR3 1016 aaKnown RBP6.6□□□□□ -1.35
PHC3-214ENST00000494943 STK24Q9Y6E0 443 aa6.6□□□□□ -1.35
PHC3-214ENST00000494943 PTPRMP28827 1452 aa6.6□□□□□ -1.35
PHC3-214ENST00000494943 TMEM110-MUSTN1A8MSY1 372 aa6.6□□□□□ -1.35
PHC3-214ENST00000494943 DKC1O60832 514 aaKnown RBP eCLIP6.6□□□□□ -1.35
PHC3-214ENST00000494943 GNAQP50148 359 aa6.6□□□□□ -1.35
PHC3-214ENST00000494943 NUP107P57740 925 aa6.6□□□□□ -1.35
PHC3-214ENST00000494943 NFRKBQ6P4R8 1299 aa6.6□□□□□ -1.35
PHC3-214ENST00000494943 SYDE1Q6ZW31 735 aaPredicted RBP6.6□□□□□ -1.35
PHC3-214ENST00000494943 SV2BQ7L1I2 683 aa6.6□□□□□ -1.35
PHC3-214ENST00000494943 TMEM110Q86TL2 294 aa6.6□□□□□ -1.35
PHC3-214ENST00000494943 SYN2Q92777 582 aaPredicted RBP6.6□□□□□ -1.35
PHC3-214ENST00000494943 SAR1AQ9NR31 198 aa6.6□□□□□ -1.35
PHC3-214ENST00000494943 CEP72Q9P209 647 aa6.6□□□□□ -1.35
PHC3-214ENST00000494943 FLT4P35916 1363 aa6.59□□□□□ -1.35
PHC3-214ENST00000494943 GOLGA8QA0A0J9YX86 632 aa6.59□□□□□ -1.35
PHC3-214ENST00000494943 GOLGA8OA6NCC3 632 aa6.59□□□□□ -1.35
PHC3-214ENST00000494943 GOLGA8NF8WBI6 632 aa6.59□□□□□ -1.35
PHC3-214ENST00000494943 TEX33O43247 280 aa6.59□□□□□ -1.35
PHC3-214ENST00000494943 BUB1O43683 1085 aa6.59□□□□□ -1.35
PHC3-214ENST00000494943 FKBP6O75344 327 aa6.59□□□□□ -1.35
PHC3-214ENST00000494943 MMP1P03956 469 aa6.59□□□□□ -1.35
PHC3-214ENST00000494943 OATP04181 439 aa6.59□□□□□ -1.35
PHC3-214ENST00000494943 POLR2EP19388 210 aaKnown RBP6.59□□□□□ -1.35
PHC3-214ENST00000494943 RFC5P40937 340 aa6.59□□□□□ -1.35
PHC3-214ENST00000494943 EHHADHQ08426 723 aa6.59□□□□□ -1.35
PHC3-214ENST00000494943 ACCSLQ4AC99 568 aa6.59□□□□□ -1.35
PHC3-214ENST00000494943 ERMARDQ5T6L9 678 aa6.59□□□□□ -1.35
PHC3-214ENST00000494943 CDKAL1Q5VV42 579 aa6.59□□□□□ -1.35
PHC3-214ENST00000494943 SHC4Q6S5L8 630 aa6.59□□□□□ -1.35
PHC3-214ENST00000494943 NLRP9Q7RTR0 991 aa6.59□□□□□ -1.35
PHC3-214ENST00000494943 MORC4Q8TE76 937 aa6.59□□□□□ -1.35
PHC3-214ENST00000494943 CASKIN2Q8WXE0 1202 aa6.59□□□□□ -1.35
PHC3-214ENST00000494943 TMEM237Q96Q45 408 aa6.59□□□□□ -1.35
PHC3-214ENST00000494943 PSMB7Q99436 277 aa6.59□□□□□ -1.35
PHC3-214ENST00000494943 MAK16Q9BXY0 300 aaKnown RBP6.59□□□□□ -1.35
PHC3-214ENST00000494943 CRNKL1Q9BZJ0 848 aaKnown RBP6.59□□□□□ -1.35
PHC3-214ENST00000494943 HOMER2Q9NSB8 354 aa6.59□□□□□ -1.35
PHC3-214ENST00000494943 CCDC61Q9Y6R9 512 aa6.59□□□□□ -1.35
PHC3-214ENST00000494943 SYNGAP1Q96PV0 1343 aa6.59□□□□□ -1.35
PHC3-214ENST00000494943 THAP12O43422 761 aa6.59□□□□□ -1.35
PHC3-214ENST00000494943 CYTH3O43739 400 aa6.59□□□□□ -1.35
PHC3-214ENST00000494943 KRT75O95678 551 aa6.59□□□□□ -1.35
PHC3-214ENST00000494943 SRGNP10124 158 aa6.59□□□□□ -1.35
PHC3-214ENST00000494943 PTPN4P29074 926 aa6.59□□□□□ -1.35
PHC3-214ENST00000494943 CHRNA3P32297 505 aa6.59□□□□□ -1.35
PHC3-214ENST00000494943 ERVK-24P63145 666 aa6.59□□□□□ -1.35
PHC3-214ENST00000494943 GRIN1Q05586 938 aa6.59□□□□□ -1.35
PHC3-214ENST00000494943 EIF4A2Q14240 407 aaKnown RBP6.59□□□□□ -1.35
PHC3-214ENST00000494943 ZNF827Q17R98 1081 aa6.59□□□□□ -1.35
PHC3-214ENST00000494943 MARK2Q7KZI7 788 aaKnown RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms