RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 PDCD2LQ9BRP1 358 aa11.78□□□□□ -0.52
PRPF4B-209ENST00000494674 PXMP2Q9NR77 195 aa11.78□□□□□ -0.52
PRPF4B-209ENST00000494674 SPDYE16A6NNV3 312 aaPredicted RBP11.77□□□□□ -0.52
PRPF4B-209ENST00000494674 KIF2AO00139 706 aaPredicted RBP11.77□□□□□ -0.52
PRPF4B-209ENST00000494674 CCP110O43303 1012 aa11.77□□□□□ -0.52
PRPF4B-209ENST00000494674 KRT18P05783 430 aaKnown RBP11.77□□□□□ -0.52
PRPF4B-209ENST00000494674 EIF2AK2P19525 551 aaKnown RBP11.77□□□□□ -0.52
PRPF4B-209ENST00000494674 KLK7P49862 253 aa11.77□□□□□ -0.52
PRPF4B-209ENST00000494674 COG2Q14746 738 aa11.77□□□□□ -0.52
PRPF4B-209ENST00000494674 SYCP1Q15431 976 aa11.77□□□□□ -0.52
PRPF4B-209ENST00000494674 MAN2A1Q16706 1144 aa11.77□□□□□ -0.52
PRPF4B-209ENST00000494674 BMT2Q1RMZ1 405 aa11.77□□□□□ -0.52
PRPF4B-209ENST00000494674 TPH2Q8IWU9 490 aa11.77□□□□□ -0.52
PRPF4B-209ENST00000494674 DNAJC7Q99615 494 aa11.77□□□□□ -0.52
PRPF4B-209ENST00000494674 DESI2Q9BSY9 194 aa11.77□□□□□ -0.52
PRPF4B-209ENST00000494674 NOC4LQ9BVI4 516 aaKnown RBP11.77□□□□□ -0.52
PRPF4B-209ENST00000494674 CAPN11Q9UMQ6 739 aa11.77□□□□□ -0.52
PRPF4B-209ENST00000494674 SIK3Q9Y2K2 1263 aa11.77□□□□□ -0.52
PRPF4B-209ENST00000494674 MYPNQ86TC9 1320 aa11.77□□□□□ -0.53
PRPF4B-209ENST00000494674 KRT9P35527 623 aa11.77□□□□□ -0.53
PRPF4B-209ENST00000494674 MARSP56192 900 aaKnown RBP11.77□□□□□ -0.53
PRPF4B-209ENST00000494674 FKBP3Q00688 224 aaKnown RBP11.77□□□□□ -0.53
PRPF4B-209ENST00000494674 TBC1D8BQ0IIM8 1120 aa11.77□□□□□ -0.53
PRPF4B-209ENST00000494674 PRKG1Q13976 671 aa11.77□□□□□ -0.53
PRPF4B-209ENST00000494674 BAATQ14032 418 aaPredicted RBP11.77□□□□□ -0.53
PRPF4B-209ENST00000494674 VWA3BQ502W6 1294 aa11.77□□□□□ -0.53
PRPF4B-209ENST00000494674 SNRNP48Q6IEG0 339 aaKnown RBP11.77□□□□□ -0.53
PRPF4B-209ENST00000494674 NSMFQ6X4W1 530 aa11.77□□□□□ -0.53
PRPF4B-209ENST00000494674 NELFCDQ8IXH7 590 aa11.77□□□□□ -0.53
PRPF4B-209ENST00000494674 NEK9Q8TD19 979 aa11.77□□□□□ -0.53
PRPF4B-209ENST00000494674 CNKSR2Q8WXI2 1034 aa11.77□□□□□ -0.53
PRPF4B-209ENST00000494674 CEP63Q96MT8 703 aa11.77□□□□□ -0.53
PRPF4B-209ENST00000494674 RMDN3Q96TC7 470 aa11.77□□□□□ -0.53
PRPF4B-209ENST00000494674 TSG101Q99816 390 aa11.77□□□□□ -0.53
PRPF4B-209ENST00000494674 LXNQ9BS40 222 aa11.77□□□□□ -0.53
PRPF4B-209ENST00000494674 MRPL44Q9H9J2 332 aaKnown RBP11.77□□□□□ -0.53
PRPF4B-209ENST00000494674 OLFML3Q9NRN5 406 aa11.77□□□□□ -0.53
PRPF4B-209ENST00000494674 PKD2L1Q9P0L9 805 aa11.77□□□□□ -0.53
PRPF4B-209ENST00000494674 PAXBP1Q9Y5B6 917 aa11.77□□□□□ -0.53
PRPF4B-209ENST00000494674 ADGRG1Q9Y653 693 aa11.77□□□□□ -0.53
PRPF4B-209ENST00000494674 ZMYM2Q9UBW7 1377 aa11.76□□□□□ -0.53
PRPF4B-209ENST00000494674 DDX39AO00148 427 aaKnown RBP11.76□□□□□ -0.53
PRPF4B-209ENST00000494674 ZSCAN12O43309 604 aa11.76□□□□□ -0.53
PRPF4B-209ENST00000494674 FGFR1OPO95684 399 aaKnown RBP11.76□□□□□ -0.53
PRPF4B-209ENST00000494674 TPM1P09493 284 aa11.76□□□□□ -0.53
PRPF4B-209ENST00000494674 MYBP10242 640 aa11.76□□□□□ -0.53
PRPF4B-209ENST00000494674 ZNF131P52739 623 aa11.76□□□□□ -0.53
PRPF4B-209ENST00000494674 ETF1P62495 437 aaKnown RBP11.76□□□□□ -0.53
PRPF4B-209ENST00000494674 MAP3K9P80192 1104 aa11.76□□□□□ -0.53
PRPF4B-209ENST00000494674 MTMR1Q13613 665 aa11.76□□□□□ -0.53
PRPF4B-209ENST00000494674 EDRF1Q3B7T1 1238 aa11.76□□□□□ -0.53
PRPF4B-209ENST00000494674 FIGNQ5HY92 759 aa11.76□□□□□ -0.53
PRPF4B-209ENST00000494674 C9orf131Q5VYM1 1079 aa11.76□□□□□ -0.53
PRPF4B-209ENST00000494674 WDR59Q6PJI9 974 aa11.76□□□□□ -0.53
PRPF4B-209ENST00000494674 BANK1Q8NDB2 785 aa11.76□□□□□ -0.53
PRPF4B-209ENST00000494674 NACC1Q96RE7 527 aa11.76□□□□□ -0.53
PRPF4B-209ENST00000494674 FIZ1Q96SL8 496 aa11.76□□□□□ -0.53
PRPF4B-209ENST00000494674 NDST4Q9H3R1 872 aa11.76□□□□□ -0.53
PRPF4B-209ENST00000494674 CTDP1Q9Y5B0 961 aaPredicted RBP11.76□□□□□ -0.53
PRPF4B-209ENST00000494674 SCN4AP35499 1836 aa11.76□□□□□ -0.53
PRPF4B-209ENST00000494674 TRAF5O00463 557 aa11.75□□□□□ -0.53
PRPF4B-209ENST00000494674 PES1O00541 588 aaKnown RBP11.75□□□□□ -0.53
PRPF4B-209ENST00000494674 CTIFO43310 598 aaKnown RBP11.75□□□□□ -0.53
PRPF4B-209ENST00000494674 ATP9AO75110 1047 aa11.75□□□□□ -0.53
PRPF4B-209ENST00000494674 GAP43P17677 238 aa11.75□□□□□ -0.53
PRPF4B-209ENST00000494674 MAPK7Q13164 816 aa11.75□□□□□ -0.53
PRPF4B-209ENST00000494674 TREML2Q5T2D2 321 aa11.75□□□□□ -0.53
PRPF4B-209ENST00000494674 VSIG10LQ86VR7 867 aa11.75□□□□□ -0.53
PRPF4B-209ENST00000494674 TMTC1Q8IUR5 882 aa11.75□□□□□ -0.53
PRPF4B-209ENST00000494674 TRIM59Q8IWR1 403 aa11.75□□□□□ -0.53
PRPF4B-209ENST00000494674 RETREG2Q8NC44 543 aa11.75□□□□□ -0.53
PRPF4B-209ENST00000494674 L3MBTL3Q96JM7 780 aaPredicted RBP11.75□□□□□ -0.53
PRPF4B-209ENST00000494674 TEX13BQ9BXU2 312 aa11.75□□□□□ -0.53
PRPF4B-209ENST00000494674 ZHX3Q9H4I2 956 aa11.75□□□□□ -0.53
PRPF4B-209ENST00000494674 POLD4Q9HCU8 107 aa11.75□□□□□ -0.53
PRPF4B-209ENST00000494674 TMOD4Q9NZQ9 345 aa11.75□□□□□ -0.53
PRPF4B-209ENST00000494674 TRAF3IP3Q9Y228 551 aa11.75□□□□□ -0.53
PRPF4B-209ENST00000494674 COL4A3BPQ9Y5P4 624 aa11.75□□□□□ -0.53
PRPF4B-209ENST00000494674 A0A0U1RQJ8 604 aa11.74□□□□□ -0.53
PRPF4B-209ENST00000494674 A0A1W2PQJ5 194 aa11.74□□□□□ -0.53
PRPF4B-209ENST00000494674 DYNC1I1O14576 645 aa11.74□□□□□ -0.53
PRPF4B-209ENST00000494674 EPHB6O15197 1021 aa11.74□□□□□ -0.53
PRPF4B-209ENST00000494674 TBCAO75347 108 aaKnown RBP11.74□□□□□ -0.53
PRPF4B-209ENST00000494674 RGS20O76081 388 aa11.74□□□□□ -0.53
PRPF4B-209ENST00000494674 KIF20AO95235 890 aa11.74□□□□□ -0.53
PRPF4B-209ENST00000494674 LYPLA2O95372 231 aa11.74□□□□□ -0.53
PRPF4B-209ENST00000494674 CCNE2O96020 404 aa11.74□□□□□ -0.53
PRPF4B-209ENST00000494674 TUBB4AP04350 444 aa11.74□□□□□ -0.53
PRPF4B-209ENST00000494674 MYCLP12524 364 aaPredicted RBP11.74□□□□□ -0.53
PRPF4B-209ENST00000494674 GUCY2CP25092 1073 aa11.74□□□□□ -0.53
PRPF4B-209ENST00000494674 MEA1Q16626 185 aa11.74□□□□□ -0.53
PRPF4B-209ENST00000494674 XRRA1Q6P2D8 792 aa11.74□□□□□ -0.53
PRPF4B-209ENST00000494674 SYT10Q6XYQ8 523 aa11.74□□□□□ -0.53
PRPF4B-209ENST00000494674 MIER3Q7Z3K6 550 aa11.74□□□□□ -0.53
PRPF4B-209ENST00000494674 DAW1Q8N136 415 aa11.74□□□□□ -0.53
PRPF4B-209ENST00000494674 OR8K1Q8NGG5 319 aa11.74□□□□□ -0.53
PRPF4B-209ENST00000494674 RBM46Q8TBY0 533 aaKnown RBP11.74□□□□□ -0.53
PRPF4B-209ENST00000494674 ATRIPQ8WXE1 791 aa11.74□□□□□ -0.53
PRPF4B-209ENST00000494674 ZNF592Q92610 1267 aa11.74□□□□□ -0.53
PRPF4B-209ENST00000494674 DCPSQ96C86 337 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 184.8 ms