RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 NOVA2Q9UNW9 492 aaKnown RBP5.23□□□□□ -1.57
PRKD3-210ENST00000494667 TMEM98Q9Y2Y6 226 aa5.23□□□□□ -1.57
PRKD3-210ENST00000494667 CCDC169A6NNP5 214 aa5.23□□□□□ -1.57
PRKD3-210ENST00000494667 SMAPO00193 183 aa5.23□□□□□ -1.57
PRKD3-210ENST00000494667 RHOBTB3O94955 611 aa5.23□□□□□ -1.57
PRKD3-210ENST00000494667 VIL1P09327 827 aaKnown RBP5.23□□□□□ -1.57
PRKD3-210ENST00000494667 ZFXP17010 805 aaPredicted RBP5.23□□□□□ -1.57
PRKD3-210ENST00000494667 SMARCA1P28370 1054 aa5.23□□□□□ -1.57
PRKD3-210ENST00000494667 CCT6AP40227 531 aaKnown RBP5.23□□□□□ -1.57
PRKD3-210ENST00000494667 METAP2P50579 478 aaKnown RBP eCLIP5.23□□□□□ -1.57
PRKD3-210ENST00000494667 GPSM2P81274 684 aa5.23□□□□□ -1.57
PRKD3-210ENST00000494667 TRIM29Q14134 588 aa5.23□□□□□ -1.57
PRKD3-210ENST00000494667 GRM2Q14416 872 aa5.23□□□□□ -1.57
PRKD3-210ENST00000494667 CLUL1Q15846 466 aa5.23□□□□□ -1.57
PRKD3-210ENST00000494667 CNGA2Q16280 664 aa5.23□□□□□ -1.57
PRKD3-210ENST00000494667 CNPY1Q3B7I2 92 aa5.23□□□□□ -1.57
PRKD3-210ENST00000494667 TMEM259Q4ZIN3 620 aa5.23□□□□□ -1.57
PRKD3-210ENST00000494667 C6orf118Q5T5N4 469 aa5.23□□□□□ -1.57
PRKD3-210ENST00000494667 ANKLE1Q8NAG6 615 aa5.23□□□□□ -1.57
PRKD3-210ENST00000494667 DIS3LQ8TF46 1054 aaKnown RBP5.23□□□□□ -1.57
PRKD3-210ENST00000494667 LPIN2Q92539 896 aa5.23□□□□□ -1.57
PRKD3-210ENST00000494667 TNFRSF25Q93038 417 aa5.23□□□□□ -1.57
PRKD3-210ENST00000494667 ESF1Q9H501 851 aaKnown RBP5.23□□□□□ -1.57
PRKD3-210ENST00000494667 HSFX1Q9UBD0 423 aa5.23□□□□□ -1.57
PRKD3-210ENST00000494667 NKX1-2Q9UD57 310 aaPredicted RBP5.23□□□□□ -1.57
PRKD3-210ENST00000494667 SEC63Q9UGP8 760 aaKnown RBP5.23□□□□□ -1.57
PRKD3-210ENST00000494667 DIS3Q9Y2L1 958 aaKnown RBP5.23□□□□□ -1.57
PRKD3-210ENST00000494667 DUSP10Q9Y6W6 482 aa5.23□□□□□ -1.57
PRKD3-210ENST00000494667 TOGARAM1Q9Y4F4 1720 aa5.23□□□□□ -1.57
PRKD3-210ENST00000494667 MYH10P35580 1976 aa5.22□□□□□ -1.57
PRKD3-210ENST00000494667 ATP6V1G1O75348 118 aa5.22□□□□□ -1.57
PRKD3-210ENST00000494667 TCEA3O75764 348 aa5.22□□□□□ -1.57
PRKD3-210ENST00000494667 ASLP04424 464 aa5.22□□□□□ -1.57
PRKD3-210ENST00000494667 HARSP12081 509 aaKnown RBP5.22□□□□□ -1.57
PRKD3-210ENST00000494667 GSTT1P30711 240 aa5.22□□□□□ -1.57
PRKD3-210ENST00000494667 HPDP32754 393 aaPredicted RBP5.22□□□□□ -1.57
PRKD3-210ENST00000494667 TRAPPC10P48553 1259 aa5.22□□□□□ -1.57
PRKD3-210ENST00000494667 FOSBP53539 338 aa5.22□□□□□ -1.57
PRKD3-210ENST00000494667 YARSP54577 528 aaKnown RBP5.22□□□□□ -1.57
PRKD3-210ENST00000494667 ATP2C1P98194 919 aaPredicted RBP5.22□□□□□ -1.57
PRKD3-210ENST00000494667 BCL2A1Q16548 175 aa5.22□□□□□ -1.57
PRKD3-210ENST00000494667 SLFN11Q7Z7L1 901 aa5.22□□□□□ -1.57
PRKD3-210ENST00000494667 GIMAP8Q8ND71 665 aaPredicted RBP5.22□□□□□ -1.57
PRKD3-210ENST00000494667 PHC3Q8NDX5 983 aa5.22□□□□□ -1.57
PRKD3-210ENST00000494667 IGDCC4Q8TDY8 1250 aa5.22□□□□□ -1.57
PRKD3-210ENST00000494667 VPS16Q9H269 839 aa5.22□□□□□ -1.57
PRKD3-210ENST00000494667 ZDHHC18Q9NUE0 388 aa5.22□□□□□ -1.57
PRKD3-210ENST00000494667 ZDHHC7Q9NXF8 308 aa5.22□□□□□ -1.57
PRKD3-210ENST00000494667 STOML1Q9UBI4 398 aa5.22□□□□□ -1.57
PRKD3-210ENST00000494667 FBXL5Q9UKA1 691 aa5.22□□□□□ -1.57
PRKD3-210ENST00000494667 CCDC88AQ3V6T2 1871 aa5.22□□□□□ -1.57
PRKD3-210ENST00000494667 SMIM31A0A1B0GVY4 71 aa5.22□□□□□ -1.57
PRKD3-210ENST00000494667 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.22□□□□□ -1.57
PRKD3-210ENST00000494667 MOCS3O95396 460 aa5.22□□□□□ -1.57
PRKD3-210ENST00000494667 AFPP02771 609 aaKnown RBP5.22□□□□□ -1.57
PRKD3-210ENST00000494667 SKIP12755 728 aa5.22□□□□□ -1.57
PRKD3-210ENST00000494667 RASA1P20936 1047 aa5.22□□□□□ -1.57
PRKD3-210ENST00000494667 SLC18A1P54219 525 aa5.22□□□□□ -1.57
PRKD3-210ENST00000494667 CREB5Q02930 508 aa5.22□□□□□ -1.57
PRKD3-210ENST00000494667 HNRNPDQ14103 355 aaKnown RBP5.22□□□□□ -1.57
PRKD3-210ENST00000494667 HSP90AA4PQ58FG1 418 aa5.22□□□□□ -1.57
PRKD3-210ENST00000494667 CCDC80Q76M96 950 aa5.22□□□□□ -1.57
PRKD3-210ENST00000494667 GRAMD1CQ8IYS0 662 aa5.22□□□□□ -1.57
PRKD3-210ENST00000494667 BAP1Q92560 729 aa5.22□□□□□ -1.57
PRKD3-210ENST00000494667 NECTIN2Q92692 538 aa5.22□□□□□ -1.57
PRKD3-210ENST00000494667 ZNF653Q96CK0 615 aa5.22□□□□□ -1.57
PRKD3-210ENST00000494667 CCDC42Q96M95 316 aa5.22□□□□□ -1.57
PRKD3-210ENST00000494667 POLR3CQ9BUI4 534 aaPredicted RBP5.22□□□□□ -1.57
PRKD3-210ENST00000494667 PUS3Q9BZE2 481 aaKnown RBP5.22□□□□□ -1.57
PRKD3-210ENST00000494667 BRD8Q9H0E9 1235 aa5.22□□□□□ -1.57
PRKD3-210ENST00000494667 DDX47Q9H0S4 455 aaKnown RBP5.22□□□□□ -1.57
PRKD3-210ENST00000494667 PREBQ9HCU5 417 aa5.22□□□□□ -1.57
PRKD3-210ENST00000494667 C9orf78Q9NZ63 289 aaPredicted RBP5.22□□□□□ -1.57
PRKD3-210ENST00000494667 BARX2Q9UMQ3 279 aaPredicted RBP5.22□□□□□ -1.57
PRKD3-210ENST00000494667 MAP3K2Q9Y2U5 619 aa5.22□□□□□ -1.57
PRKD3-210ENST00000494667 BZW2Q9Y6E2 419 aaKnown RBP5.22□□□□□ -1.57
PRKD3-210ENST00000494667 CIAO1O76071 339 aa5.22□□□□□ -1.57
PRKD3-210ENST00000494667 FAM200BP0CF97 657 aa5.22□□□□□ -1.57
PRKD3-210ENST00000494667 GJA8P48165 433 aa5.22□□□□□ -1.57
PRKD3-210ENST00000494667 USP11P51784 963 aa5.22□□□□□ -1.57
PRKD3-210ENST00000494667 NPEPPSP55786 919 aa5.22□□□□□ -1.57
PRKD3-210ENST00000494667 USP4Q13107 963 aa5.22□□□□□ -1.57
PRKD3-210ENST00000494667 FAM91A1Q658Y4 838 aa5.22□□□□□ -1.57
PRKD3-210ENST00000494667 HGSNATQ68CP4 663 aa5.22□□□□□ -1.57
PRKD3-210ENST00000494667 PASD1Q8IV76 773 aa5.22□□□□□ -1.57
PRKD3-210ENST00000494667 STAG2Q8N3U4 1231 aa5.22□□□□□ -1.57
PRKD3-210ENST00000494667 ERMNQ8TAM6 284 aa5.22□□□□□ -1.57
PRKD3-210ENST00000494667 PRCCQ92733 491 aaPredicted RBP5.22□□□□□ -1.57
PRKD3-210ENST00000494667 MTMR8Q96EF0 704 aa5.22□□□□□ -1.57
PRKD3-210ENST00000494667 NEUROG2Q9H2A3 272 aa5.22□□□□□ -1.57
PRKD3-210ENST00000494667 PABPC3Q9H361 631 aaKnown RBP5.22□□□□□ -1.57
PRKD3-210ENST00000494667 MLXIPQ9HAP2 919 aa5.22□□□□□ -1.57
PRKD3-210ENST00000494667 EHD2Q9NZN4 543 aa5.22□□□□□ -1.57
PRKD3-210ENST00000494667 KIF13AQ9H1H9 1805 aa5.22□□□□□ -1.57
PRKD3-210ENST00000494667 A0A0A6YYK5 440 aaPredicted RBP5.21□□□□□ -1.57
PRKD3-210ENST00000494667 RGL2O15211 777 aa5.21□□□□□ -1.57
PRKD3-210ENST00000494667 NVLO15381 856 aaKnown RBP5.21□□□□□ -1.57
PRKD3-210ENST00000494667 RPN1P04843 607 aaKnown RBP5.21□□□□□ -1.57
PRKD3-210ENST00000494667 RFC5P40937 340 aa5.21□□□□□ -1.57
PRKD3-210ENST00000494667 PTDSS1P48651 473 aaKnown RBP5.21□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms