RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 LINC01599Q8WXQ3 324 aa13.49□□□□□ -0.25
CSNK1E-212ENST00000494610 SAMD11Q96NU1 681 aa13.49□□□□□ -0.25
CSNK1E-212ENST00000494610 MAF1Q9H063 256 aa13.49□□□□□ -0.25
CSNK1E-212ENST00000494610 KIAA1671Q9BY89 1806 aa13.48□□□□□ -0.25
CSNK1E-212ENST00000494610 SPATA31C2B4DYI2 1134 aa13.48□□□□□ -0.25
CSNK1E-212ENST00000494610 ENPP3O14638 875 aa13.48□□□□□ -0.25
CSNK1E-212ENST00000494610 RPS6KB1P23443 525 aa13.48□□□□□ -0.25
CSNK1E-212ENST00000494610 MARK3P27448 753 aa13.48□□□□□ -0.25
CSNK1E-212ENST00000494610 BMPR1AP36894 532 aa13.48□□□□□ -0.25
CSNK1E-212ENST00000494610 GATMP50440 423 aa13.48□□□□□ -0.25
CSNK1E-212ENST00000494610 FGD1P98174 961 aa13.48□□□□□ -0.25
CSNK1E-212ENST00000494610 LPIN1Q14693 890 aa13.48□□□□□ -0.25
CSNK1E-212ENST00000494610 PUS10Q3MIT2 529 aaKnown RBP13.48□□□□□ -0.25
CSNK1E-212ENST00000494610 CCDC178Q5BJE1 867 aa13.48□□□□□ -0.25
CSNK1E-212ENST00000494610 KCNV1Q6PIU1 500 aa13.48□□□□□ -0.25
CSNK1E-212ENST00000494610 USP17L6PQ6QN14 398 aa13.48□□□□□ -0.25
CSNK1E-212ENST00000494610 DHX32Q7L7V1 743 aaKnown RBP13.48□□□□□ -0.25
CSNK1E-212ENST00000494610 RNF135Q8IUD6 432 aa13.48□□□□□ -0.25
CSNK1E-212ENST00000494610 RC3H2Q9HBD1 1191 aaKnown RBP13.48□□□□□ -0.25
CSNK1E-212ENST00000494610 PDRG1Q9NUG6 133 aa13.48□□□□□ -0.25
CSNK1E-212ENST00000494610 PKD2L1Q9P0L9 805 aa13.48□□□□□ -0.25
CSNK1E-212ENST00000494610 ZFHX2Q9C0A1 2572 aaPredicted RBP13.48□□□□□ -0.25
CSNK1E-212ENST00000494610 KAT6AQ92794 2004 aa13.47□□□□□ -0.25
CSNK1E-212ENST00000494610 ADGRA3Q8IWK6 1321 aa13.47□□□□□ -0.25
CSNK1E-212ENST00000494610 ERICH2A1L162 156 aa13.47□□□□□ -0.25
CSNK1E-212ENST00000494610 ATP9AO75110 1047 aa13.47□□□□□ -0.25
CSNK1E-212ENST00000494610 TGFB3P10600 412 aa13.47□□□□□ -0.25
CSNK1E-212ENST00000494610 IBSPP21815 317 aaPredicted RBP13.47□□□□□ -0.25
CSNK1E-212ENST00000494610 RBM10P98175 930 aaKnown RBP13.47□□□□□ -0.25
CSNK1E-212ENST00000494610 MGAT3Q09327 533 aa13.47□□□□□ -0.25
CSNK1E-212ENST00000494610 GRM4Q14833 912 aa13.47□□□□□ -0.25
CSNK1E-212ENST00000494610 SMAD2Q15796 467 aaKnown RBP13.47□□□□□ -0.25
CSNK1E-212ENST00000494610 ADCK5Q3MIX3 580 aa13.47□□□□□ -0.25
CSNK1E-212ENST00000494610 FAM26DQ5JW98 314 aa13.47□□□□□ -0.25
CSNK1E-212ENST00000494610 METTL7BQ6UX53 244 aa13.47□□□□□ -0.25
CSNK1E-212ENST00000494610 RTN4RL1Q86UN2 441 aaPredicted RBP13.47□□□□□ -0.25
CSNK1E-212ENST00000494610 TMEM87BQ96K49 555 aa13.47□□□□□ -0.25
CSNK1E-212ENST00000494610 INPP4AQ96PE3 977 aaPredicted RBP13.47□□□□□ -0.25
CSNK1E-212ENST00000494610 UPF3BQ9BZI7 483 aaKnown RBP13.47□□□□□ -0.25
CSNK1E-212ENST00000494610 RIOX1Q9H6W3 641 aa13.47□□□□□ -0.25
CSNK1E-212ENST00000494610 AGO3Q9H9G7 860 aaKnown RBP13.47□□□□□ -0.25
CSNK1E-212ENST00000494610 LOXHD1Q8IVV2 1947 aa13.47□□□□□ -0.25
CSNK1E-212ENST00000494610 C5orf67F2Z3F1 127 aa13.46□□□□□ -0.25
CSNK1E-212ENST00000494610 ICAM3P32942 547 aa13.46□□□□□ -0.25
CSNK1E-212ENST00000494610 TMEM62Q0P6H9 643 aa13.46□□□□□ -0.25
CSNK1E-212ENST00000494610 COL9A3Q14050 684 aaPredicted RBP13.46□□□□□ -0.25
CSNK1E-212ENST00000494610 PAN2Q504Q3 1202 aaKnown RBP13.46□□□□□ -0.25
CSNK1E-212ENST00000494610 RBM23Q86U06 439 aaKnown RBP13.46□□□□□ -0.25
CSNK1E-212ENST00000494610 MB21D2Q8IYB1 491 aaPredicted RBP13.46□□□□□ -0.25
CSNK1E-212ENST00000494610 FBXL16Q8N461 479 aa13.46□□□□□ -0.25
CSNK1E-212ENST00000494610 PRSS33Q8NF86 280 aa13.46□□□□□ -0.25
CSNK1E-212ENST00000494610 DNAJB3Q8WWF6 145 aa13.46□□□□□ -0.25
CSNK1E-212ENST00000494610 IPO9Q96P70 1041 aaKnown RBP13.46□□□□□ -0.25
CSNK1E-212ENST00000494610 EHMT1Q9H9B1 1298 aa13.46□□□□□ -0.25
CSNK1E-212ENST00000494610 SH2B1Q9NRF2 756 aaPredicted RBP13.46□□□□□ -0.25
CSNK1E-212ENST00000494610 PRKAG3Q9UGI9 489 aa13.46□□□□□ -0.25
CSNK1E-212ENST00000494610 MRPL42Q9Y6G3 142 aaKnown RBP13.46□□□□□ -0.25
CSNK1E-212ENST00000494610 ZDBF2Q9HCK1 2354 aa13.46□□□□□ -0.25
CSNK1E-212ENST00000494610 TTC3P53804 2025 aa13.46□□□□□ -0.26
CSNK1E-212ENST00000494610 FRMPD4Q14CM0 1322 aa13.45□□□□□ -0.26
CSNK1E-212ENST00000494610 PNMA6FA0A0J9YX94 578 aa13.45□□□□□ -0.26
CSNK1E-212ENST00000494610 GSTTP1A0A1W2PQM5 241 aa13.45□□□□□ -0.26
CSNK1E-212ENST00000494610 K7ELQ4 463 aaPredicted RBP13.45□□□□□ -0.26
CSNK1E-212ENST00000494610 STXBP3O00186 592 aa13.45□□□□□ -0.26
CSNK1E-212ENST00000494610 CD52P31358 61 aa13.45□□□□□ -0.26
CSNK1E-212ENST00000494610 TCF7P36402 384 aaPredicted RBP13.45□□□□□ -0.26
CSNK1E-212ENST00000494610 IGBP1P78318 339 aa13.45□□□□□ -0.26
CSNK1E-212ENST00000494610 ADAM15Q13444 863 aa13.45□□□□□ -0.26
CSNK1E-212ENST00000494610 BTG3Q14201 252 aaPredicted RBP13.45□□□□□ -0.26
CSNK1E-212ENST00000494610 MARCH8Q5T0T0 291 aa13.45□□□□□ -0.26
CSNK1E-212ENST00000494610 CMTR1Q8N1G2 835 aaKnown RBP13.45□□□□□ -0.26
CSNK1E-212ENST00000494610 ZNF689Q96CS4 500 aaPredicted RBP13.45□□□□□ -0.26
CSNK1E-212ENST00000494610 ZSCAN31Q96LW9 406 aaPredicted RBP13.45□□□□□ -0.26
CSNK1E-212ENST00000494610 MYL10Q9BUA6 226 aa13.45□□□□□ -0.26
CSNK1E-212ENST00000494610 MAP3K20Q9NYL2 800 aaKnown RBP13.45□□□□□ -0.26
CSNK1E-212ENST00000494610 CLEC1BQ9P126 229 aa13.45□□□□□ -0.26
CSNK1E-212ENST00000494610 PLAGL2Q9UPG8 496 aa13.45□□□□□ -0.26
CSNK1E-212ENST00000494610 hCG_1642624A0A1W2PR95 340 aa13.44□□□□□ -0.26
CSNK1E-212ENST00000494610 MEIS2O14770 477 aa13.44□□□□□ -0.26
CSNK1E-212ENST00000494610 IFIT3O14879 490 aaKnown RBP13.44□□□□□ -0.26
CSNK1E-212ENST00000494610 FIBPO43427 364 aa13.44□□□□□ -0.26
CSNK1E-212ENST00000494610 PRC1O43663 620 aa13.44□□□□□ -0.26
CSNK1E-212ENST00000494610 PPFIA3O75145 1194 aa13.44□□□□□ -0.26
CSNK1E-212ENST00000494610 CAND2O75155 1236 aa13.44□□□□□ -0.26
CSNK1E-212ENST00000494610 DGKIO75912 1065 aa13.44□□□□□ -0.26
CSNK1E-212ENST00000494610 ITGB1P05556 798 aa13.44□□□□□ -0.26
CSNK1E-212ENST00000494610 TROAPQ12815 778 aa13.44□□□□□ -0.26
CSNK1E-212ENST00000494610 NEDD9Q14511 834 aa13.44□□□□□ -0.26
CSNK1E-212ENST00000494610 HERC4Q5GLZ8 1057 aaPredicted RBP13.44□□□□□ -0.26
CSNK1E-212ENST00000494610 FBXO47Q5MNV8 452 aa13.44□□□□□ -0.26
CSNK1E-212ENST00000494610 TMTC2Q8N394 836 aa13.44□□□□□ -0.26
CSNK1E-212ENST00000494610 TRAPPC12Q8WVT3 735 aa13.44□□□□□ -0.26
CSNK1E-212ENST00000494610 APBB2Q92870 758 aa13.44□□□□□ -0.26
CSNK1E-212ENST00000494610 CLP1Q92989 425 aaKnown RBP13.44□□□□□ -0.26
CSNK1E-212ENST00000494610 C11orf84Q9BUA3 381 aaPredicted RBP13.44□□□□□ -0.26
CSNK1E-212ENST00000494610 FAM49AQ9H0Q0 323 aaPredicted RBP13.44□□□□□ -0.26
CSNK1E-212ENST00000494610 HCSTQ9UBK5 93 aa13.44□□□□□ -0.26
CSNK1E-212ENST00000494610 CD207Q9UJ71 328 aa13.44□□□□□ -0.26
CSNK1E-212ENST00000494610 BARX2Q9UMQ3 279 aaPredicted RBP13.44□□□□□ -0.26
CSNK1E-212ENST00000494610 LIMCH1Q9UPQ0 1083 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms