RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 STAT5BP51692 787 aa37.72■■■■□ 3.63
CBX4-203ENST00000494546 RUFY4Q6ZNE9 571 aa37.72■■■■□ 3.63
CBX4-203ENST00000494546 HERC6Q8IVU3 1022 aa37.72■■■■□ 3.63
CBX4-203ENST00000494546 SLC17A8Q8NDX2 589 aa37.72■■■■□ 3.63
CBX4-203ENST00000494546 IL17RAQ96F46 866 aa37.72■■■■□ 3.63
CBX4-203ENST00000494546 TUBE1Q9UJT0 475 aa37.72■■■■□ 3.63
CBX4-203ENST00000494546 ABHD14A-ACY1A0A1B0GW23 586 aa37.71■■■■□ 3.63
CBX4-203ENST00000494546 DHX15O43143 795 aaKnown RBP37.71■■■■□ 3.63
CBX4-203ENST00000494546 ATG7O95352 703 aa37.71■■■■□ 3.63
CBX4-203ENST00000494546 CIITAP33076 1130 aa37.71■■■■□ 3.63
CBX4-203ENST00000494546 IKBKEQ14164 716 aa37.71■■■■□ 3.63
CBX4-203ENST00000494546 PLPPR4Q7Z2D5 763 aa37.71■■■■□ 3.63
CBX4-203ENST00000494546 BACH1O14867 736 aa37.7■■■■□ 3.63
CBX4-203ENST00000494546 INSRRP14616 1297 aa37.7■■■■□ 3.63
CBX4-203ENST00000494546 PPP2R2DQ66LE6 453 aa37.7■■■■□ 3.63
CBX4-203ENST00000494546 TAF2Q6P1X5 1199 aa37.7■■■■□ 3.63
CBX4-203ENST00000494546 BLIDQ8IZY5 108 aa37.7■■■■□ 3.63
CBX4-203ENST00000494546 PRDM12Q9H4Q4 367 aa37.7■■■■□ 3.63
CBX4-203ENST00000494546 DTNBO60941 627 aa37.69■■■■□ 3.62
CBX4-203ENST00000494546 PLCB4Q15147 1175 aa37.69■■■■□ 3.62
CBX4-203ENST00000494546 DBF4BQ8NFT6 615 aa37.69■■■■□ 3.62
CBX4-203ENST00000494546 MAFAQ8NHW3 353 aaPredicted RBP37.69■■■■□ 3.62
CBX4-203ENST00000494546 TBC1D22BQ9NU19 505 aa37.69■■■■□ 3.62
CBX4-203ENST00000494546 KAT6AQ92794 2004 aa37.68■■■■□ 3.62
CBX4-203ENST00000494546 KIF28PB7ZC32 967 aa37.68■■■■□ 3.62
CBX4-203ENST00000494546 NEK4P51957 841 aa37.68■■■■□ 3.62
CBX4-203ENST00000494546 DEFB103AP81534 67 aa37.68■■■■□ 3.62
CBX4-203ENST00000494546 MARCH8Q5T0T0 291 aa37.68■■■■□ 3.62
CBX4-203ENST00000494546 MIS18BP1Q6P0N0 1132 aa37.68■■■■□ 3.62
CBX4-203ENST00000494546 ABHD15Q6UXT9 468 aa37.68■■■■□ 3.62
CBX4-203ENST00000494546 TMCO2Q7Z6W1 182 aaPredicted RBP37.68■■■■□ 3.62
CBX4-203ENST00000494546 TBCKQ8TEA7 893 aa37.68■■■■□ 3.62
CBX4-203ENST00000494546 TNPO1Q92973 898 aaKnown RBP37.68■■■■□ 3.62
CBX4-203ENST00000494546 C22orf23Q9BZE7 217 aa37.68■■■■□ 3.62
CBX4-203ENST00000494546 MBLAC1A4D2B0 266 aaPredicted RBP37.67■■■■□ 3.62
CBX4-203ENST00000494546 RRN3P2A6NIE6 340 aa37.67■■■■□ 3.62
CBX4-203ENST00000494546 EFCAB14O75071 495 aa37.67■■■■□ 3.62
CBX4-203ENST00000494546 CA3P07451 260 aa37.67■■■■□ 3.62
CBX4-203ENST00000494546 USP11P51784 963 aa37.67■■■■□ 3.62
CBX4-203ENST00000494546 FAM160B1Q5W0V3 765 aa37.67■■■■□ 3.62
CBX4-203ENST00000494546 GALNT17Q6IS24 598 aa37.67■■■■□ 3.62
CBX4-203ENST00000494546 FAM177A1Q8N128 213 aaPredicted RBP37.67■■■■□ 3.62
CBX4-203ENST00000494546 DAGLBQ8NCG7 672 aa37.67■■■■□ 3.62
CBX4-203ENST00000494546 LENG9Q96B70 501 aa37.67■■■■□ 3.62
CBX4-203ENST00000494546 OSBPL7Q9BZF2 842 aa37.67■■■■□ 3.62
CBX4-203ENST00000494546 TCEAL9Q9UHQ7 104 aa37.67■■■■□ 3.62
CBX4-203ENST00000494546 KCNJ14Q9UNX9 436 aa37.67■■■■□ 3.62
CBX4-203ENST00000494546 STK36Q9NRP7 1315 aa37.66■■■■□ 3.62
CBX4-203ENST00000494546 IGKV6D-21A0A0A0MT36 114 aa37.66■■■■□ 3.62
CBX4-203ENST00000494546 EDIL3O43854 480 aa37.66■■■■□ 3.62
CBX4-203ENST00000494546 PLEKHG4Q58EX7 1191 aa37.66■■■■□ 3.62
CBX4-203ENST00000494546 RSPH3Q86UC2 560 aa37.66■■■■□ 3.62
CBX4-203ENST00000494546 NECAB1Q8N987 351 aa37.66■■■■□ 3.62
CBX4-203ENST00000494546 ZBTB10Q96DT7 871 aa37.66■■■■□ 3.62
CBX4-203ENST00000494546 POTEB3A0JP26 581 aa37.65■■■■□ 3.62
CBX4-203ENST00000494546 NPY5RQ15761 445 aa37.65■■■■□ 3.62
CBX4-203ENST00000494546 FAM26DQ5JW98 314 aa37.65■■■■□ 3.62
CBX4-203ENST00000494546 POTEBQ6S5H4 581 aa37.65■■■■□ 3.62
CBX4-203ENST00000494546 CCDC60Q8IWA6 550 aaPredicted RBP37.65■■■■□ 3.62
CBX4-203ENST00000494546 TRAPPC12Q8WVT3 735 aa37.65■■■■□ 3.62
CBX4-203ENST00000494546 DNAJB3Q8WWF6 145 aa37.65■■■■□ 3.62
CBX4-203ENST00000494546 SEPT8Q92599 483 aa37.65■■■■□ 3.62
CBX4-203ENST00000494546 GAS2L1Q99501 681 aaPredicted RBP37.65■■■■□ 3.62
CBX4-203ENST00000494546 ZBED2Q9BTP6 218 aa37.65■■■■□ 3.62
CBX4-203ENST00000494546 ZNF302Q9NR11 478 aa37.65■■■■□ 3.62
CBX4-203ENST00000494546 TLL1O43897 1013 aa37.64■■■■□ 3.62
CBX4-203ENST00000494546 CTDNEP1O95476 244 aa37.64■■■■□ 3.62
CBX4-203ENST00000494546 SLC26A2P50443 739 aa37.64■■■■□ 3.62
CBX4-203ENST00000494546 ME3Q16798 604 aa37.64■■■■□ 3.62
CBX4-203ENST00000494546 ZNF746Q6NUN9 644 aaPredicted RBP37.64■■■■□ 3.62
CBX4-203ENST00000494546 SWSAP1Q6NVH7 229 aa37.64■■■■□ 3.62
CBX4-203ENST00000494546 RPAINQ86UA6 219 aa37.64■■■■□ 3.62
CBX4-203ENST00000494546 CDH23Q9H251 3354 aa37.63■■■■□ 3.61
CBX4-203ENST00000494546 M0R2N6 131 aa37.63■■■■□ 3.61
CBX4-203ENST00000494546 LARGE1O95461 756 aa37.63■■■■□ 3.61
CBX4-203ENST00000494546 CHRNA1P02708 482 aa37.63■■■■□ 3.61
CBX4-203ENST00000494546 KRT76Q01546 638 aa37.63■■■■□ 3.61
CBX4-203ENST00000494546 PDXDC2PQ6P474 469 aa37.63■■■■□ 3.61
CBX4-203ENST00000494546 FAM49AQ9H0Q0 323 aaPredicted RBP37.63■■■■□ 3.61
CBX4-203ENST00000494546 ORC3Q9UBD5 711 aaPredicted RBP37.63■■■■□ 3.61
CBX4-203ENST00000494546 MSH4O15457 936 aa37.62■■■■□ 3.61
CBX4-203ENST00000494546 XBP1P17861 261 aa37.62■■■■□ 3.61
CBX4-203ENST00000494546 LIN28BQ6ZN17 250 aaKnown RBP eCLIP37.62■■■■□ 3.61
CBX4-203ENST00000494546 PHF20Q9BVI0 1012 aa37.62■■■■□ 3.61
CBX4-203ENST00000494546 SMAP1Q8IYB5 467 aaPredicted RBP37.61■■■■□ 3.61
CBX4-203ENST00000494546 ATP8B4Q8TF62 1192 aa37.61■■■■□ 3.61
CBX4-203ENST00000494546 GJB4Q9NTQ9 266 aa37.61■■■■□ 3.61
CBX4-203ENST00000494546 NONOQ15233 471 aaKnown RBP eCLIP37.6■■■■□ 3.61
CBX4-203ENST00000494546 FAM117BQ6P1L5 589 aa37.6■■■■□ 3.61
CBX4-203ENST00000494546 KRT25Q7Z3Z0 450 aa37.6■■■■□ 3.61
CBX4-203ENST00000494546 GTF3C6Q969F1 213 aa37.6■■■■□ 3.61
CBX4-203ENST00000494546 SAMM50Q9Y512 469 aa37.6■■■■□ 3.61
CBX4-203ENST00000494546 PCDHA10Q9Y5I2 948 aa37.6■■■■□ 3.61
CBX4-203ENST00000494546 HBP1O60381 514 aa37.59■■■■□ 3.61
CBX4-203ENST00000494546 TDP2O95551 362 aa37.59■■■■□ 3.61
CBX4-203ENST00000494546 PSAPP07602 524 aa37.59■■■■□ 3.61
CBX4-203ENST00000494546 GHRP10912 638 aa37.59■■■■□ 3.61
CBX4-203ENST00000494546 CKAP2LQ8IYA6 745 aa37.59■■■■□ 3.61
CBX4-203ENST00000494546 CERS4Q9HA82 394 aa37.59■■■■□ 3.61
CBX4-203ENST00000494546 PTPRSQ13332 1948 aa37.59■■■■□ 3.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms