RNA–Protein interactions for RNA: ENST00000494327.1

HPS3-207, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 556 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-207ENST00000494327 LAMA3Q16787 3333 aa24.83■■□□□ 1.56
HPS3-207ENST00000494327 RSPH10B2B2RC85 870 aa24.82■■□□□ 1.56
HPS3-207ENST00000494327 MSH4O15457 936 aa24.82■■□□□ 1.56
HPS3-207ENST00000494327 NBNO60934 754 aa24.82■■□□□ 1.56
HPS3-207ENST00000494327 PARNO95453 639 aaKnown RBP24.82■■□□□ 1.56
HPS3-207ENST00000494327 TDP2O95551 362 aa24.82■■□□□ 1.56
HPS3-207ENST00000494327 CTSHP09668 335 aa24.82■■□□□ 1.56
HPS3-207ENST00000494327 RSPH10BP0C881 870 aa24.82■■□□□ 1.56
HPS3-207ENST00000494327 ADAM17P78536 824 aa24.82■■□□□ 1.56
HPS3-207ENST00000494327 ST3GAL1Q11201 340 aa24.82■■□□□ 1.56
HPS3-207ENST00000494327 PLCB4Q15147 1175 aa24.82■■□□□ 1.56
HPS3-207ENST00000494327 SWSAP1Q6NVH7 229 aa24.82■■□□□ 1.56
HPS3-207ENST00000494327 MIS18BP1Q6P0N0 1132 aa24.82■■□□□ 1.56
HPS3-207ENST00000494327 TRAF7Q6Q0C0 670 aa24.82■■□□□ 1.56
HPS3-207ENST00000494327 PLPPR4Q7Z2D5 763 aa24.82■■□□□ 1.56
HPS3-207ENST00000494327 SAMM50Q9Y512 469 aa24.82■■□□□ 1.56
HPS3-207ENST00000494327 INSRRP14616 1297 aa24.81■■□□□ 1.56
HPS3-207ENST00000494327 PBX2P40425 430 aa24.81■■□□□ 1.56
HPS3-207ENST00000494327 FAM160B1Q5W0V3 765 aa24.81■■□□□ 1.56
HPS3-207ENST00000494327 TNPO1Q92973 898 aaKnown RBP24.81■■□□□ 1.56
HPS3-207ENST00000494327 GJA10Q969M2 543 aa24.81■■□□□ 1.56
HPS3-207ENST00000494327 ZNF302Q9NR11 478 aa24.81■■□□□ 1.56
HPS3-207ENST00000494327 MTMR10Q9NXD2 777 aa24.81■■□□□ 1.56
HPS3-207ENST00000494327 SCN5AQ14524 2016 aa24.81■■□□□ 1.56
HPS3-207ENST00000494327 POTEB3A0JP26 581 aa24.8■■□□□ 1.56
HPS3-207ENST00000494327 DNAJB2P25686 324 aa24.8■■□□□ 1.56
HPS3-207ENST00000494327 KRT76Q01546 638 aa24.8■■□□□ 1.56
HPS3-207ENST00000494327 LETM2Q2VYF4 491 aa24.8■■□□□ 1.56
HPS3-207ENST00000494327 Q4G0T1 1027 aa24.8■■□□□ 1.56
HPS3-207ENST00000494327 ZNF746Q6NUN9 644 aaPredicted RBP24.8■■□□□ 1.56
HPS3-207ENST00000494327 POTEBQ6S5H4 581 aa24.8■■□□□ 1.56
HPS3-207ENST00000494327 RUFY4Q6ZNE9 571 aa24.8■■□□□ 1.56
HPS3-207ENST00000494327 PIK3AP1Q6ZUJ8 805 aa24.8■■□□□ 1.56
HPS3-207ENST00000494327 CCDC60Q8IWA6 550 aaPredicted RBP24.8■■□□□ 1.56
HPS3-207ENST00000494327 ZBTB10Q96DT7 871 aa24.8■■□□□ 1.56
HPS3-207ENST00000494327 ZSCAN31Q96LW9 406 aaPredicted RBP24.8■■□□□ 1.56
HPS3-207ENST00000494327 BRMS1Q9HCU9 246 aa24.8■■□□□ 1.56
HPS3-207ENST00000494327 TUBE1Q9UJT0 475 aa24.8■■□□□ 1.56
HPS3-207ENST00000494327 IGKV6D-21A0A0A0MT36 114 aa24.79■■□□□ 1.56
HPS3-207ENST00000494327 RRN3P2A6NIE6 340 aa24.79■■□□□ 1.56
HPS3-207ENST00000494327 GAS7O60861 476 aa24.79■■□□□ 1.56
HPS3-207ENST00000494327 KRT2P35908 639 aa24.79■■□□□ 1.56
HPS3-207ENST00000494327 TRIM29Q14134 588 aa24.79■■□□□ 1.56
HPS3-207ENST00000494327 MBTPS1Q14703 1052 aa24.79■■□□□ 1.56
HPS3-207ENST00000494327 PDXDC2PQ6P474 469 aa24.79■■□□□ 1.56
HPS3-207ENST00000494327 TRMT1LQ7Z2T5 733 aaKnown RBP24.79■■□□□ 1.56
HPS3-207ENST00000494327 CKAP2LQ8IYA6 745 aa24.79■■□□□ 1.56
HPS3-207ENST00000494327 TRAPPC12Q8WVT3 735 aa24.79■■□□□ 1.56
HPS3-207ENST00000494327 PBX4Q9BYU1 374 aa24.79■■□□□ 1.56
HPS3-207ENST00000494327 TRIP12Q14669 1992 aaPredicted RBP24.79■■□□□ 1.56
HPS3-207ENST00000494327 CYP3A7-CYP3A51PA0A087WV96 503 aa24.78■■□□□ 1.56
HPS3-207ENST00000494327 CHMP2AO43633 222 aa24.78■■□□□ 1.56
HPS3-207ENST00000494327 CXCL10P02778 98 aa24.78■■□□□ 1.56
HPS3-207ENST00000494327 PSAPP07602 524 aa24.78■■□□□ 1.56
HPS3-207ENST00000494327 ATP2A2P16615 1042 aaKnown RBP24.78■■□□□ 1.56
HPS3-207ENST00000494327 CYP3A7P24462 503 aa24.78■■□□□ 1.56
HPS3-207ENST00000494327 SLC26A2P50443 739 aa24.78■■□□□ 1.56
HPS3-207ENST00000494327 RABGGTBP53611 331 aa24.78■■□□□ 1.56
HPS3-207ENST00000494327 NR5A1Q13285 461 aa24.78■■□□□ 1.56
HPS3-207ENST00000494327 MARCH8Q5T0T0 291 aa24.78■■□□□ 1.56
HPS3-207ENST00000494327 LRCH2Q5VUJ6 765 aa24.78■■□□□ 1.56
HPS3-207ENST00000494327 SMAP1Q8IYB5 467 aaPredicted RBP24.78■■□□□ 1.56
HPS3-207ENST00000494327 SLC5A5Q92911 643 aa24.78■■□□□ 1.56
HPS3-207ENST00000494327 TIFAQ96CG3 184 aa24.78■■□□□ 1.56
HPS3-207ENST00000494327 RIT2Q99578 217 aa24.78■■□□□ 1.56
HPS3-207ENST00000494327 TEKT3Q9BXF9 490 aa24.78■■□□□ 1.56
HPS3-207ENST00000494327 SEMA6BQ9H3T3 888 aa24.78■■□□□ 1.56
HPS3-207ENST00000494327 DDX25Q9UHL0 483 aaKnown RBP24.78■■□□□ 1.56
HPS3-207ENST00000494327 PCDHA10Q9Y5I2 948 aa24.78■■□□□ 1.56
HPS3-207ENST00000494327 SZT2Q5T011 3432 aa24.77■■□□□ 1.56
HPS3-207ENST00000494327 TANC1Q9C0D5 1861 aa24.77■■□□□ 1.56
HPS3-207ENST00000494327 CAND2O75155 1236 aa24.77■■□□□ 1.56
HPS3-207ENST00000494327 RABEP1Q15276 862 aa24.77■■□□□ 1.56
HPS3-207ENST00000494327 TAF2Q6P1X5 1199 aa24.77■■□□□ 1.56
HPS3-207ENST00000494327 CNKSR3Q6P9H4 555 aa24.77■■□□□ 1.56
HPS3-207ENST00000494327 NEK8Q86SG6 692 aa24.77■■□□□ 1.56
HPS3-207ENST00000494327 DNAJB3Q8WWF6 145 aa24.77■■□□□ 1.56
HPS3-207ENST00000494327 TTYH1Q9H313 450 aaPredicted RBP24.77■■□□□ 1.56
HPS3-207ENST00000494327 GABBR1Q9UBS5 961 aa24.77■■□□□ 1.56
HPS3-207ENST00000494327 MSRAQ9UJ68 235 aa24.77■■□□□ 1.56
HPS3-207ENST00000494327 MBLAC1A4D2B0 266 aaPredicted RBP24.76■■□□□ 1.55
HPS3-207ENST00000494327 CCNT1O60563 726 aaKnown RBP24.76■■□□□ 1.55
HPS3-207ENST00000494327 BAIAP3O94812 1187 aa24.76■■□□□ 1.55
HPS3-207ENST00000494327 KCNJ6P48051 423 aa24.76■■□□□ 1.55
HPS3-207ENST00000494327 TCTN1Q2MV58 587 aa24.76■■□□□ 1.55
HPS3-207ENST00000494327 EARS2Q5JPH6 523 aaKnown RBP24.76■■□□□ 1.55
HPS3-207ENST00000494327 MOXD1Q6UVY6 613 aa24.76■■□□□ 1.55
HPS3-207ENST00000494327 RSPH3Q86UC2 560 aa24.76■■□□□ 1.55
HPS3-207ENST00000494327 ATP8B4Q8TF62 1192 aa24.76■■□□□ 1.55
HPS3-207ENST00000494327 FAM49AQ9H0Q0 323 aaPredicted RBP24.76■■□□□ 1.55
HPS3-207ENST00000494327 SH2B1Q9NRF2 756 aaPredicted RBP24.76■■□□□ 1.55
HPS3-207ENST00000494327 DISC1Q9NRI5 854 aa24.76■■□□□ 1.55
HPS3-207ENST00000494327 FAM205CA6NFA0 338 aa24.75■■□□□ 1.55
HPS3-207ENST00000494327 WDR64B1ANS9 1081 aa24.75■■□□□ 1.55
HPS3-207ENST00000494327 SLC37A4O43826 429 aa24.75■■□□□ 1.55
HPS3-207ENST00000494327 HBP1O60381 514 aa24.75■■□□□ 1.55
HPS3-207ENST00000494327 MMP1P03956 469 aa24.75■■□□□ 1.55
HPS3-207ENST00000494327 GUCY1B3Q02153 619 aa24.75■■□□□ 1.55
HPS3-207ENST00000494327 RAB30Q15771 203 aa24.75■■□□□ 1.55
HPS3-207ENST00000494327 KRT40Q6A162 431 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms