RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 TTC13Q8NBP0 860 aa21.66■■□□□ 1.06
RNF40-203ENST00000493683 DCPSQ96C86 337 aaKnown RBP21.66■■□□□ 1.06
RNF40-203ENST00000493683 CEP72Q9P209 647 aa21.66■■□□□ 1.06
RNF40-203ENST00000493683 WDR19Q8NEZ3 1342 aa21.66■■□□□ 1.06
RNF40-203ENST00000493683 SYNJ2BP-COX16A0A087WUM0 186 aa21.65■■□□□ 1.06
RNF40-203ENST00000493683 GOLGA8SH3BPF8 625 aa21.65■■□□□ 1.06
RNF40-203ENST00000493683 BBOX1O75936 387 aa21.65■■□□□ 1.06
RNF40-203ENST00000493683 CA4P22748 312 aa21.65■■□□□ 1.06
RNF40-203ENST00000493683 RASGRP4Q8TDF6 673 aa21.65■■□□□ 1.06
RNF40-203ENST00000493683 MRPL40Q9NQ50 206 aaKnown RBP21.65■■□□□ 1.06
RNF40-203ENST00000493683 COX16Q9P0S2 106 aa21.65■■□□□ 1.06
RNF40-203ENST00000493683 YEATS2Q9ULM3 1422 aa21.65■■□□□ 1.06
RNF40-203ENST00000493683 TJP3O95049 919 aa21.65■■□□□ 1.06
RNF40-203ENST00000493683 NECTIN1Q15223 517 aa21.65■■□□□ 1.06
RNF40-203ENST00000493683 EAPPQ56P03 285 aaPredicted RBP21.65■■□□□ 1.06
RNF40-203ENST00000493683 SYDE2Q5VT97 1194 aa21.65■■□□□ 1.06
RNF40-203ENST00000493683 ARMCX2Q7L311 632 aa21.65■■□□□ 1.06
RNF40-203ENST00000493683 MRPL46Q9H2W6 279 aaKnown RBP21.65■■□□□ 1.06
RNF40-203ENST00000493683 LDHAP00338 332 aaKnown RBP21.65■■□□□ 1.06
RNF40-203ENST00000493683 PSAPP07602 524 aa21.65■■□□□ 1.06
RNF40-203ENST00000493683 AP3B2Q13367 1082 aa21.65■■□□□ 1.06
RNF40-203ENST00000493683 CC2D2BQ6DHV5 1058 aa21.65■■□□□ 1.06
RNF40-203ENST00000493683 SPOPLQ6IQ16 392 aa21.65■■□□□ 1.06
RNF40-203ENST00000493683 DEPDC1BQ8WUY9 529 aa21.65■■□□□ 1.06
RNF40-203ENST00000493683 KIFC3Q9BVG8 833 aa21.65■■□□□ 1.06
RNF40-203ENST00000493683 TMEM60Q9H2L4 133 aa21.65■■□□□ 1.06
RNF40-203ENST00000493683 DONSONQ9NYP3 566 aa21.65■■□□□ 1.06
RNF40-203ENST00000493683 CPSF3Q9UKF6 684 aaKnown RBP21.65■■□□□ 1.06
RNF40-203ENST00000493683 BCS1LQ9Y276 419 aa21.65■■□□□ 1.06
RNF40-203ENST00000493683 ERVV-1B6SEH8 477 aa21.65■■□□□ 1.06
RNF40-203ENST00000493683 INO80B-WBP1J3KQ70 363 aa21.65■■□□□ 1.06
RNF40-203ENST00000493683 PPARGP37231 505 aaPredicted RBP21.65■■□□□ 1.06
RNF40-203ENST00000493683 ARHGEF25Q86VW2 580 aa21.65■■□□□ 1.06
RNF40-203ENST00000493683 RBM41Q96IZ5 413 aaKnown RBP21.65■■□□□ 1.06
RNF40-203ENST00000493683 TRAIPQ9BWF2 469 aa21.65■■□□□ 1.06
RNF40-203ENST00000493683 INO80BQ9C086 356 aaPredicted RBP21.65■■□□□ 1.06
RNF40-203ENST00000493683 PNMA6FA0A0J9YX94 578 aa21.65■■□□□ 1.06
RNF40-203ENST00000493683 FAM170AA1A519 330 aa21.65■■□□□ 1.06
RNF40-203ENST00000493683 CLIC2O15247 247 aa21.65■■□□□ 1.06
RNF40-203ENST00000493683 XPAP23025 273 aaPredicted RBP21.65■■□□□ 1.06
RNF40-203ENST00000493683 CXCR5P32302 372 aa21.65■■□□□ 1.06
RNF40-203ENST00000493683 NR5A1Q13285 461 aa21.65■■□□□ 1.06
RNF40-203ENST00000493683 CRLF3Q8IUI8 442 aa21.65■■□□□ 1.06
RNF40-203ENST00000493683 PLS3P13797 630 aa21.64■■□□□ 1.06
RNF40-203ENST00000493683 STAT2P52630 851 aa21.64■■□□□ 1.06
RNF40-203ENST00000493683 DGKHQ86XP1 1220 aa21.64■■□□□ 1.06
RNF40-203ENST00000493683 GRAMD1CQ8IYS0 662 aa21.64■■□□□ 1.06
RNF40-203ENST00000493683 MTA3Q9BTC8 594 aa21.64■■□□□ 1.06
RNF40-203ENST00000493683 CALN1Q9BXU9 219 aa21.64■■□□□ 1.06
RNF40-203ENST00000493683 LRRC4Q9HBW1 653 aa21.64■■□□□ 1.06
RNF40-203ENST00000493683 HINFPQ9BQA5 517 aa21.64■■□□□ 1.05
RNF40-203ENST00000493683 ZNF521Q96K83 1311 aa21.64■■□□□ 1.05
RNF40-203ENST00000493683 PPEF1O14829 653 aaPredicted RBP21.64■■□□□ 1.05
RNF40-203ENST00000493683 MAGEA9P43362 315 aa21.64■■□□□ 1.05
RNF40-203ENST00000493683 C4orf50Q6ZRC1 276 aa21.64■■□□□ 1.05
RNF40-203ENST00000493683 UNC13DQ70J99 1090 aa21.64■■□□□ 1.05
RNF40-203ENST00000493683 ZBED1O96006 694 aa21.64■■□□□ 1.05
RNF40-203ENST00000493683 IL1RL1Q01638 556 aa21.64■■□□□ 1.05
RNF40-203ENST00000493683 ARL13BQ3SXY8 428 aa21.64■■□□□ 1.05
RNF40-203ENST00000493683 EEF2KMTQ96G04 330 aa21.64■■□□□ 1.05
RNF40-203ENST00000493683 WDR75Q8IWA0 830 aaKnown RBP21.63■■□□□ 1.05
RNF40-203ENST00000493683 VPS39Q96JC1 886 aa21.63■■□□□ 1.05
RNF40-203ENST00000493683 TRIM55Q9BYV6 548 aa21.63■■□□□ 1.05
RNF40-203ENST00000493683 AKT3Q9Y243 479 aa21.63■■□□□ 1.05
RNF40-203ENST00000493683 LOC102724428A0A0B4J2F2 783 aa21.63■■□□□ 1.05
RNF40-203ENST00000493683 TAC1P20366 129 aa21.63■■□□□ 1.05
RNF40-203ENST00000493683 SIK1P57059 783 aa21.63■■□□□ 1.05
RNF40-203ENST00000493683 FBXO38Q6PIJ6 1188 aa21.63■■□□□ 1.05
RNF40-203ENST00000493683 CNPY4Q8N129 248 aa21.63■■□□□ 1.05
RNF40-203ENST00000493683 SYT2Q8N9I0 419 aaPredicted RBP21.63■■□□□ 1.05
RNF40-203ENST00000493683 PCDHB6Q9Y5E3 794 aa21.63■■□□□ 1.05
RNF40-203ENST00000493683 DOK7Q18PE1 504 aa21.63■■□□□ 1.05
RNF40-203ENST00000493683 TMTC4Q5T4D3 741 aa21.63■■□□□ 1.05
RNF40-203ENST00000493683 SLCO1A2P46721 670 aa21.63■■□□□ 1.05
RNF40-203ENST00000493683 FSCBQ5H9T9 825 aa21.63■■□□□ 1.05
RNF40-203ENST00000493683 PI4K2BQ8TCG2 481 aa21.63■■□□□ 1.05
RNF40-203ENST00000493683 COBLO75128 1261 aa21.62■■□□□ 1.05
RNF40-203ENST00000493683 ARL4CP56559 192 aa21.62■■□□□ 1.05
RNF40-203ENST00000493683 BBS9Q3SYG4 887 aa21.62■■□□□ 1.05
RNF40-203ENST00000493683 OR6B2Q6IFH4 312 aa21.62■■□□□ 1.05
RNF40-203ENST00000493683 KLC2Q9H0B6 622 aa21.62■■□□□ 1.05
RNF40-203ENST00000493683 KIAA1586Q9HCI6 787 aa21.62■■□□□ 1.05
RNF40-203ENST00000493683 GRID2IPA4D2P6 1211 aa21.62■■□□□ 1.05
RNF40-203ENST00000493683 TAF1BQ53T94 588 aaPredicted RBP21.62■■□□□ 1.05
RNF40-203ENST00000493683 NBPF10Q6P3W6 841 aaKnown RBP21.62■■□□□ 1.05
RNF40-203ENST00000493683 LRRC43Q8N309 656 aa21.62■■□□□ 1.05
RNF40-203ENST00000493683 LCORLQ8N3X6 602 aa21.62■■□□□ 1.05
RNF40-203ENST00000493683 ZSWIM5Q9P217 1185 aa21.62■■□□□ 1.05
RNF40-203ENST00000493683 ARHGEF5Q12774 1597 aa21.62■■□□□ 1.05
RNF40-203ENST00000493683 LGALS16A8MUM7 142 aa21.62■■□□□ 1.05
RNF40-203ENST00000493683 NVLO15381 856 aaKnown RBP21.62■■□□□ 1.05
RNF40-203ENST00000493683 SPAG7O75391 227 aa21.62■■□□□ 1.05
RNF40-203ENST00000493683 CRKLP46109 303 aaKnown RBP21.62■■□□□ 1.05
RNF40-203ENST00000493683 IGBP1P78318 339 aa21.62■■□□□ 1.05
RNF40-203ENST00000493683 TFAMQ00059 246 aaKnown RBP21.62■■□□□ 1.05
RNF40-203ENST00000493683 TEDDM1Q5T9Z0 273 aa21.62■■□□□ 1.05
RNF40-203ENST00000493683 PITPNM3Q9BZ71 974 aa21.62■■□□□ 1.05
RNF40-203ENST00000493683 RFX7Q2KHR2 1363 aa21.62■■□□□ 1.05
RNF40-203ENST00000493683 OSBPP22059 807 aa21.62■■□□□ 1.05
RNF40-203ENST00000493683 SIX6OS1Q8N1H7 587 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms