RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 PABPC5Q96DU9 382 aaKnown RBP19.93■□□□□ 0.78
COL9A1-210ENST00000493682 NSUN3Q9H649 340 aaKnown RBP19.93■□□□□ 0.78
COL9A1-210ENST00000493682 JADE2Q9NQC1 790 aa19.93■□□□□ 0.78
COL9A1-210ENST00000493682 PCDHA6Q9UN73 950 aa19.93■□□□□ 0.78
COL9A1-210ENST00000493682 ARIH1Q9Y4X5 557 aaPredicted RBP19.93■□□□□ 0.78
COL9A1-210ENST00000493682 PCDHA8Q9Y5H6 950 aa19.93■□□□□ 0.78
COL9A1-210ENST00000493682 SLC12A7Q9Y666 1083 aa19.93■□□□□ 0.78
COL9A1-210ENST00000493682 NLRC5Q86WI3 1866 aa19.92■□□□□ 0.78
COL9A1-210ENST00000493682 C5orf67F2Z3F1 127 aa19.92■□□□□ 0.78
COL9A1-210ENST00000493682 ENPP3O14638 875 aa19.92■□□□□ 0.78
COL9A1-210ENST00000493682 SSTR3P32745 418 aaPredicted RBP19.92■□□□□ 0.78
COL9A1-210ENST00000493682 IRX6P78412 446 aaPredicted RBP19.92■□□□□ 0.78
COL9A1-210ENST00000493682 FBXO47Q5MNV8 452 aa19.92■□□□□ 0.78
COL9A1-210ENST00000493682 TMTC3Q6ZXV5 915 aa19.92■□□□□ 0.78
COL9A1-210ENST00000493682 FANCBQ8NB91 859 aa19.92■□□□□ 0.78
COL9A1-210ENST00000493682 ZBTB10Q96DT7 871 aa19.92■□□□□ 0.78
COL9A1-210ENST00000493682 LRRC2Q9BYS8 371 aa19.92■□□□□ 0.78
COL9A1-210ENST00000493682 RC3H2Q9HBD1 1191 aaKnown RBP19.92■□□□□ 0.78
COL9A1-210ENST00000493682 CDY2AQ9Y6F7 541 aa19.92■□□□□ 0.78
COL9A1-210ENST00000493682 RALGAPA2Q2PPJ7 1873 aa19.92■□□□□ 0.78
COL9A1-210ENST00000493682 KAT6AQ92794 2004 aa19.92■□□□□ 0.78
COL9A1-210ENST00000493682 MAFGO15525 162 aa19.91■□□□□ 0.78
COL9A1-210ENST00000493682 RB1P06400 928 aa19.91■□□□□ 0.78
COL9A1-210ENST00000493682 BMPR1AP36894 532 aa19.91■□□□□ 0.78
COL9A1-210ENST00000493682 IGBP1P78318 339 aa19.91■□□□□ 0.78
COL9A1-210ENST00000493682 CREB3L3Q68CJ9 461 aa19.91■□□□□ 0.78
COL9A1-210ENST00000493682 TSHZ1Q6ZSZ6 1077 aa19.91■□□□□ 0.78
COL9A1-210ENST00000493682 EP400NLQ6ZTU2 488 aa19.91■□□□□ 0.78
COL9A1-210ENST00000493682 HEATR3Q7Z4Q2 680 aa19.91■□□□□ 0.78
COL9A1-210ENST00000493682 PCYT2Q99447 389 aa19.91■□□□□ 0.78
COL9A1-210ENST00000493682 ADGRA3Q8IWK6 1321 aa19.91■□□□□ 0.78
COL9A1-210ENST00000493682 GRM6O15303 877 aa19.9■□□□□ 0.78
COL9A1-210ENST00000493682 INSRRP14616 1297 aa19.9■□□□□ 0.78
COL9A1-210ENST00000493682 MRPS6P82932 125 aaKnown RBP19.9■□□□□ 0.78
COL9A1-210ENST00000493682 NECTIN1Q15223 517 aa19.9■□□□□ 0.78
COL9A1-210ENST00000493682 CLP1Q92989 425 aaKnown RBP19.9■□□□□ 0.78
COL9A1-210ENST00000493682 ESYT1Q9BSJ8 1104 aa19.9■□□□□ 0.78
COL9A1-210ENST00000493682 C11orf84Q9BUA3 381 aaPredicted RBP19.9■□□□□ 0.78
COL9A1-210ENST00000493682 AGO3Q9H9G7 860 aaKnown RBP19.9■□□□□ 0.78
COL9A1-210ENST00000493682 JPH1Q9HDC5 661 aaPredicted RBP19.9■□□□□ 0.78
COL9A1-210ENST00000493682 RWDD3Q9Y3V2 267 aa19.9■□□□□ 0.78
COL9A1-210ENST00000493682 RRN3P2A6NIE6 340 aa19.89■□□□□ 0.77
COL9A1-210ENST00000493682 SGMS1Q86VZ5 419 aa19.89■□□□□ 0.77
COL9A1-210ENST00000493682 MICU3Q86XE3 530 aa19.89■□□□□ 0.77
COL9A1-210ENST00000493682 ZNF689Q96CS4 500 aaPredicted RBP19.89■□□□□ 0.77
COL9A1-210ENST00000493682 FAM49AQ9H0Q0 323 aaPredicted RBP19.89■□□□□ 0.77
COL9A1-210ENST00000493682 LMAN2LQ9H0V9 348 aa19.89■□□□□ 0.77
COL9A1-210ENST00000493682 KCNH7Q9NS40 1196 aa19.89■□□□□ 0.77
COL9A1-210ENST00000493682 CLDND1Q9NY35 253 aa19.89■□□□□ 0.77
COL9A1-210ENST00000493682 SLC9A2Q9UBY0 812 aa19.89■□□□□ 0.77
COL9A1-210ENST00000493682 DGKIO75912 1065 aa19.88■□□□□ 0.77
COL9A1-210ENST00000493682 RPLP2P05387 115 aaKnown RBP19.88■□□□□ 0.77
COL9A1-210ENST00000493682 CD52P31358 61 aa19.88■□□□□ 0.77
COL9A1-210ENST00000493682 BTG3Q14201 252 aaPredicted RBP19.88■□□□□ 0.77
COL9A1-210ENST00000493682 IER5Q5VY09 327 aa19.88■□□□□ 0.77
COL9A1-210ENST00000493682 WWC2Q6AWC2 1192 aa19.88■□□□□ 0.77
COL9A1-210ENST00000493682 CYP2W1Q8TAV3 490 aa19.88■□□□□ 0.77
COL9A1-210ENST00000493682 LINC01599Q8WXQ3 324 aa19.88■□□□□ 0.77
COL9A1-210ENST00000493682 MXRA8Q9BRK3 442 aa19.88■□□□□ 0.77
COL9A1-210ENST00000493682 AZI2Q9H6S1 392 aa19.88■□□□□ 0.77
COL9A1-210ENST00000493682 FAM50BQ9Y247 325 aa19.88■□□□□ 0.77
COL9A1-210ENST00000493682 NCK2O43639 380 aa19.87■□□□□ 0.77
COL9A1-210ENST00000493682 LTBRP36941 435 aa19.87■□□□□ 0.77
COL9A1-210ENST00000493682 CTC1Q2NKJ3 1217 aa19.87■□□□□ 0.77
COL9A1-210ENST00000493682 RTN4RL1Q86UN2 441 aaPredicted RBP19.87■□□□□ 0.77
COL9A1-210ENST00000493682 ANO2Q9NQ90 1003 aa19.87■□□□□ 0.77
COL9A1-210ENST00000493682 TRPC6Q9Y210 931 aa19.87■□□□□ 0.77
COL9A1-210ENST00000493682 NFASCO94856 1347 aa19.86■□□□□ 0.77
COL9A1-210ENST00000493682 CNTNAP5Q8WYK1 1306 aa19.86■□□□□ 0.77
COL9A1-210ENST00000493682 POTEB3A0JP26 581 aa19.86■□□□□ 0.77
COL9A1-210ENST00000493682 ARP10275 920 aa19.86■□□□□ 0.77
COL9A1-210ENST00000493682 ALADP13716 330 aa19.86■□□□□ 0.77
COL9A1-210ENST00000493682 ACTR2P61160 394 aa19.86■□□□□ 0.77
COL9A1-210ENST00000493682 ZP2Q05996 745 aa19.86■□□□□ 0.77
COL9A1-210ENST00000493682 TMEM62Q0P6H9 643 aa19.86■□□□□ 0.77
COL9A1-210ENST00000493682 HYAL1Q12794 435 aa19.86■□□□□ 0.77
COL9A1-210ENST00000493682 PLCB4Q15147 1175 aa19.86■□□□□ 0.77
COL9A1-210ENST00000493682 TYW1BQ6NUM6 668 aa19.86■□□□□ 0.77
COL9A1-210ENST00000493682 POTEBQ6S5H4 581 aa19.86■□□□□ 0.77
COL9A1-210ENST00000493682 SYNE3Q6ZMZ3 975 aa19.86■□□□□ 0.77
COL9A1-210ENST00000493682 PLPPR4Q7Z2D5 763 aa19.86■□□□□ 0.77
COL9A1-210ENST00000493682 CRIPAKQ8N1N5 446 aa19.86■□□□□ 0.77
COL9A1-210ENST00000493682 TRAPPC12Q8WVT3 735 aa19.86■□□□□ 0.77
COL9A1-210ENST00000493682 PGBD1Q96JS3 809 aa19.86■□□□□ 0.77
COL9A1-210ENST00000493682 SDF4Q9BRK5 362 aa19.86■□□□□ 0.77
COL9A1-210ENST00000493682 RIC8AQ9NPQ8 531 aa19.86■□□□□ 0.77
COL9A1-210ENST00000493682 PRKAG3Q9UGI9 489 aa19.86■□□□□ 0.77
COL9A1-210ENST00000493682 PCDHA2Q9Y5H9 948 aa19.86■□□□□ 0.77
COL9A1-210ENST00000493682 TRPV2Q9Y5S1 764 aa19.86■□□□□ 0.77
COL9A1-210ENST00000493682 SQORQ9Y6N5 450 aa19.86■□□□□ 0.77
COL9A1-210ENST00000493682 TTC3P53804 2025 aa19.86■□□□□ 0.77
COL9A1-210ENST00000493682 ATG2AQ2TAZ0 1938 aa19.85■□□□□ 0.77
COL9A1-210ENST00000493682 PRR33A8MZF0 331 aa19.85■□□□□ 0.77
COL9A1-210ENST00000493682 STAT5BP51692 787 aa19.85■□□□□ 0.77
COL9A1-210ENST00000493682 NAPAP54920 295 aa19.85■□□□□ 0.77
COL9A1-210ENST00000493682 ITGB3BPQ13352 177 aaPredicted RBP19.85■□□□□ 0.77
COL9A1-210ENST00000493682 APOA5Q6Q788 366 aa19.85■□□□□ 0.77
COL9A1-210ENST00000493682 TNPO1Q92973 898 aaKnown RBP19.85■□□□□ 0.77
COL9A1-210ENST00000493682 PLVAPQ9BX97 442 aa19.85■□□□□ 0.77
COL9A1-210ENST00000493682 FTHL17Q9BXU8 183 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms