RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 TFF2Q03403 129 aa16.72■□□□□ 0.27
ATG4B-223ENST00000493618 ITGB3BPQ13352 177 aaPredicted RBP16.72■□□□□ 0.27
ATG4B-223ENST00000493618 PFKFB3Q16875 520 aaPredicted RBP16.72■□□□□ 0.27
ATG4B-223ENST00000493618 FAM26DQ5JW98 314 aa16.72■□□□□ 0.27
ATG4B-223ENST00000493618 ZNF713Q8N859 430 aaPredicted RBP16.72■□□□□ 0.27
ATG4B-223ENST00000493618 DNAJB3Q8WWF6 145 aa16.72■□□□□ 0.27
ATG4B-223ENST00000493618 PHKBQ93100 1093 aa16.72■□□□□ 0.27
ATG4B-223ENST00000493618 TSPYL2Q9H2G4 693 aaPredicted RBP16.72■□□□□ 0.27
ATG4B-223ENST00000493618 AGO4Q9HCK5 861 aaKnown RBP16.72■□□□□ 0.27
ATG4B-223ENST00000493618 TUBE1Q9UJT0 475 aa16.72■□□□□ 0.27
ATG4B-223ENST00000493618 ATG2AQ2TAZ0 1938 aa16.72■□□□□ 0.27
ATG4B-223ENST00000493618 KIAA1671Q9BY89 1806 aa16.71■□□□□ 0.27
ATG4B-223ENST00000493618 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.71■□□□□ 0.27
ATG4B-223ENST00000493618 GHRP10912 638 aa16.71■□□□□ 0.27
ATG4B-223ENST00000493618 POU3F3P20264 500 aaPredicted RBP16.71■□□□□ 0.27
ATG4B-223ENST00000493618 SREBF1P36956 1147 aa16.71■□□□□ 0.27
ATG4B-223ENST00000493618 RCAN1P53805 252 aa16.71■□□□□ 0.27
ATG4B-223ENST00000493618 ACTR2P61160 394 aa16.71■□□□□ 0.27
ATG4B-223ENST00000493618 AP3B2Q13367 1082 aa16.71■□□□□ 0.27
ATG4B-223ENST00000493618 CEP55Q53EZ4 464 aa16.71■□□□□ 0.27
ATG4B-223ENST00000493618 MARCH8Q5T0T0 291 aa16.71■□□□□ 0.27
ATG4B-223ENST00000493618 TRAPPC12Q8WVT3 735 aa16.71■□□□□ 0.27
ATG4B-223ENST00000493618 TGS1Q96RS0 853 aaKnown RBP16.71■□□□□ 0.27
ATG4B-223ENST00000493618 C17orf80Q9BSJ5 609 aa16.71■□□□□ 0.27
ATG4B-223ENST00000493618 TRPC6Q9Y210 931 aa16.71■□□□□ 0.27
ATG4B-223ENST00000493618 NFASCO94856 1347 aa16.7■□□□□ 0.26
ATG4B-223ENST00000493618 INSRRP14616 1297 aa16.7■□□□□ 0.26
ATG4B-223ENST00000493618 ERVK-21P61565 698 aa16.7■□□□□ 0.26
ATG4B-223ENST00000493618 MGAT3Q09327 533 aa16.7■□□□□ 0.26
ATG4B-223ENST00000493618 PLCB4Q15147 1175 aa16.7■□□□□ 0.26
ATG4B-223ENST00000493618 PKN1Q16512 942 aa16.7■□□□□ 0.26
ATG4B-223ENST00000493618 IFIH1Q9BYX4 1025 aaKnown RBP16.7■□□□□ 0.26
ATG4B-223ENST00000493618 FAM49AQ9H0Q0 323 aaPredicted RBP16.7■□□□□ 0.26
ATG4B-223ENST00000493618 AZI2Q9H6S1 392 aa16.7■□□□□ 0.26
ATG4B-223ENST00000493618 SUGCTQ9HAC7 445 aa16.7■□□□□ 0.26
ATG4B-223ENST00000493618 INSL6Q9Y581 213 aa16.7■□□□□ 0.26
ATG4B-223ENST00000493618 NID2Q14112 1375 aa16.69■□□□□ 0.26
ATG4B-223ENST00000493618 CCDC196A0A1B0GTZ2 297 aa16.69■□□□□ 0.26
ATG4B-223ENST00000493618 FAM86B1E9PN63 330 aa16.69■□□□□ 0.26
ATG4B-223ENST00000493618 MEIS1O00470 390 aa16.69■□□□□ 0.26
ATG4B-223ENST00000493618 PRPF3O43395 683 aaKnown RBP16.69■□□□□ 0.26
ATG4B-223ENST00000493618 REC8O95072 547 aa16.69■□□□□ 0.26
ATG4B-223ENST00000493618 FAM86B2P0C5J1 330 aa16.69■□□□□ 0.26
ATG4B-223ENST00000493618 CCT2P78371 535 aaKnown RBP16.69■□□□□ 0.26
ATG4B-223ENST00000493618 HTRA4P83105 476 aaPredicted RBP16.69■□□□□ 0.26
ATG4B-223ENST00000493618 TMEM62Q0P6H9 643 aa16.69■□□□□ 0.26
ATG4B-223ENST00000493618 LPIN1Q14693 890 aa16.69■□□□□ 0.26
ATG4B-223ENST00000493618 TAF2Q6P1X5 1199 aa16.69■□□□□ 0.26
ATG4B-223ENST00000493618 PLA2G4DQ86XP0 818 aa16.69■□□□□ 0.26
ATG4B-223ENST00000493618 IL27Q8NEV9 243 aa16.69■□□□□ 0.26
ATG4B-223ENST00000493618 RASGRP4Q8TDF6 673 aa16.69■□□□□ 0.26
ATG4B-223ENST00000493618 ADAMTS19Q8TE59 1207 aa16.69■□□□□ 0.26
ATG4B-223ENST00000493618 SLC26A6Q9BXS9 759 aa16.69■□□□□ 0.26
ATG4B-223ENST00000493618 GLT8D2Q9H1C3 349 aa16.69■□□□□ 0.26
ATG4B-223ENST00000493618 NCOA5Q9HCD5 579 aaKnown RBP16.69■□□□□ 0.26
ATG4B-223ENST00000493618 CDY2AQ9Y6F7 541 aa16.69■□□□□ 0.26
ATG4B-223ENST00000493618 MBLAC1A4D2B0 266 aaPredicted RBP16.68■□□□□ 0.26
ATG4B-223ENST00000493618 CCNE2O96020 404 aa16.68■□□□□ 0.26
ATG4B-223ENST00000493618 PSMA5P28066 241 aa16.68■□□□□ 0.26
ATG4B-223ENST00000493618 STAT5BP51692 787 aa16.68■□□□□ 0.26
ATG4B-223ENST00000493618 KCNQ1P51787 676 aa16.68■□□□□ 0.26
ATG4B-223ENST00000493618 RSPH3Q86UC2 560 aa16.68■□□□□ 0.26
ATG4B-223ENST00000493618 APBB2Q92870 758 aa16.68■□□□□ 0.26
ATG4B-223ENST00000493618 TOP1MTQ969P6 601 aa16.68■□□□□ 0.26
ATG4B-223ENST00000493618 NECAB3Q96P71 396 aaPredicted RBP16.68■□□□□ 0.26
ATG4B-223ENST00000493618 YME1L1Q96TA2 773 aa16.68■□□□□ 0.26
ATG4B-223ENST00000493618 LARP6Q9BRS8 491 aaKnown RBP16.68■□□□□ 0.26
ATG4B-223ENST00000493618 C6orf50Q9HD87 102 aa16.68■□□□□ 0.26
ATG4B-223ENST00000493618 IGLV3-22A0A075B6J6 115 aa16.67■□□□□ 0.26
ATG4B-223ENST00000493618 RRN3P2A6NIE6 340 aa16.67■□□□□ 0.26
ATG4B-223ENST00000493618 TNFRSF10AO00220 468 aa16.67■□□□□ 0.26
ATG4B-223ENST00000493618 PDIA3P30101 505 aaKnown RBP16.67■□□□□ 0.26
ATG4B-223ENST00000493618 MRPS6P82932 125 aaKnown RBP16.67■□□□□ 0.26
ATG4B-223ENST00000493618 AKAP17AQ02040 695 aaKnown RBP16.67■□□□□ 0.26
ATG4B-223ENST00000493618 NTRK3Q16288 839 aa16.67■□□□□ 0.26
ATG4B-223ENST00000493618 FBXO47Q5MNV8 452 aa16.67■□□□□ 0.26
ATG4B-223ENST00000493618 RPAINQ86UA6 219 aa16.67■□□□□ 0.26
ATG4B-223ENST00000493618 FBXO22Q8NEZ5 403 aa16.67■□□□□ 0.26
ATG4B-223ENST00000493618 SP7Q8TDD2 431 aaPredicted RBP16.67■□□□□ 0.26
ATG4B-223ENST00000493618 AGXT2Q9BYV1 514 aa16.67■□□□□ 0.26
ATG4B-223ENST00000493618 ZMYND12Q9H0C1 365 aa16.67■□□□□ 0.26
ATG4B-223ENST00000493618 ESYT2A0FGR8 921 aa16.66■□□□□ 0.26
ATG4B-223ENST00000493618 POTEB3A0JP26 581 aa16.66■□□□□ 0.26
ATG4B-223ENST00000493618 BACH1O14867 736 aa16.66■□□□□ 0.26
ATG4B-223ENST00000493618 ATG7O95352 703 aa16.66■□□□□ 0.26
ATG4B-223ENST00000493618 TOB2Q14106 344 aaPredicted RBP16.66■□□□□ 0.26
ATG4B-223ENST00000493618 POTEBQ6S5H4 581 aa16.66■□□□□ 0.26
ATG4B-223ENST00000493618 RUFY3Q7L099 469 aa16.66■□□□□ 0.26
ATG4B-223ENST00000493618 NIPA1Q7RTP0 329 aa16.66■□□□□ 0.26
ATG4B-223ENST00000493618 PLPPR4Q7Z2D5 763 aa16.66■□□□□ 0.26
ATG4B-223ENST00000493618 TEX2Q8IWB9 1127 aa16.66■□□□□ 0.26
ATG4B-223ENST00000493618 REXO1Q8N1G1 1221 aaKnown RBP16.66■□□□□ 0.26
ATG4B-223ENST00000493618 CCDC12Q8WUD4 166 aaPredicted RBP16.66■□□□□ 0.26
ATG4B-223ENST00000493618 CRYGNQ8WXF5 182 aa16.66■□□□□ 0.26
ATG4B-223ENST00000493618 UHRF1Q96T88 793 aaPredicted RBP16.66■□□□□ 0.26
ATG4B-223ENST00000493618 ZNF577Q9BSK1 485 aa16.66■□□□□ 0.26
ATG4B-223ENST00000493618 VPS54Q9P1Q0 977 aa16.66■□□□□ 0.26
ATG4B-223ENST00000493618 DHX15O43143 795 aaKnown RBP16.65■□□□□ 0.26
ATG4B-223ENST00000493618 CYP3A4P08684 503 aa16.65■□□□□ 0.26
ATG4B-223ENST00000493618 CD52P31358 61 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms