RNA–Protein interactions for RNA: ENST00000493551.1

CLIP4-212, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-212ENST00000493551 C9orf131Q5VYM1 1079 aa6.04□□□□□ -1.44
CLIP4-212ENST00000493551 HDGFL2Q7Z4V5 671 aaPredicted RBP6.04□□□□□ -1.44
CLIP4-212ENST00000493551 USP48Q86UV5 1035 aa6.04□□□□□ -1.44
CLIP4-212ENST00000493551 IP6K1Q92551 441 aa6.04□□□□□ -1.44
CLIP4-212ENST00000493551 ATG4CQ96DT6 458 aa6.04□□□□□ -1.44
CLIP4-212ENST00000493551 NBPF4Q96M43 638 aa6.04□□□□□ -1.44
CLIP4-212ENST00000493551 SIN3AQ96ST3 1273 aa6.04□□□□□ -1.44
CLIP4-212ENST00000493551 SRRTQ9BXP5 876 aaKnown RBP6.04□□□□□ -1.44
CLIP4-212ENST00000493551 LRRC3Q9BY71 257 aa6.04□□□□□ -1.44
CLIP4-212ENST00000493551 TOGARAM1Q9Y4F4 1720 aa6.04□□□□□ -1.44
CLIP4-212ENST00000493551 FAM208AQ9UK61 1670 aaKnown RBP6.04□□□□□ -1.44
CLIP4-212ENST00000493551 N4BP2Q86UW6 1770 aaPredicted RBP6.03□□□□□ -1.44
CLIP4-212ENST00000493551 PXDNLA1KZ92 1463 aa6.03□□□□□ -1.44
CLIP4-212ENST00000493551 CD163L1Q9NR16 1453 aa6.03□□□□□ -1.44
CLIP4-212ENST00000493551 C4BP0C0L5 1744 aa6.03□□□□□ -1.44
CLIP4-212ENST00000493551 TLR3O15455 904 aaKnown RBP6.03□□□□□ -1.44
CLIP4-212ENST00000493551 GLI4P10075 376 aa6.03□□□□□ -1.44
CLIP4-212ENST00000493551 DPEP1P16444 411 aa6.03□□□□□ -1.44
CLIP4-212ENST00000493551 PRELPP51888 382 aa6.03□□□□□ -1.44
CLIP4-212ENST00000493551 CACNB2Q08289 660 aaPredicted RBP6.03□□□□□ -1.44
CLIP4-212ENST00000493551 TRIM26Q12899 539 aaPredicted RBP6.03□□□□□ -1.44
CLIP4-212ENST00000493551 FAM26FQ5R3K3 315 aa6.03□□□□□ -1.44
CLIP4-212ENST00000493551 CABP7Q86V35 215 aa6.03□□□□□ -1.44
CLIP4-212ENST00000493551 TMEM192Q8IY95 271 aa6.03□□□□□ -1.44
CLIP4-212ENST00000493551 LINC00482Q8N8I6 264 aa6.03□□□□□ -1.44
CLIP4-212ENST00000493551 RAPGEF4Q8WZA2 1011 aa6.03□□□□□ -1.44
CLIP4-212ENST00000493551 SLC6A18Q96N87 628 aa6.03□□□□□ -1.44
CLIP4-212ENST00000493551 BRMS1Q9HCU9 246 aa6.03□□□□□ -1.44
CLIP4-212ENST00000493551 A0A1W2PP64 1363 aa6.03□□□□□ -1.44
CLIP4-212ENST00000493551 CICQ96RK0 1608 aaPredicted RBP6.03□□□□□ -1.44
CLIP4-212ENST00000493551 USP54Q70EL1 1684 aa6.02□□□□□ -1.45
CLIP4-212ENST00000493551 CTSHP09668 335 aa6.02□□□□□ -1.45
CLIP4-212ENST00000493551 GARTP22102 1010 aa6.02□□□□□ -1.45
CLIP4-212ENST00000493551 DAB2P98082 770 aa6.02□□□□□ -1.45
CLIP4-212ENST00000493551 PSMD2Q13200 908 aa6.02□□□□□ -1.45
CLIP4-212ENST00000493551 ITPK1Q13572 414 aa6.02□□□□□ -1.45
CLIP4-212ENST00000493551 SLC9A5Q14940 896 aa6.02□□□□□ -1.45
CLIP4-212ENST00000493551 LIMS2Q7Z4I7 341 aa6.02□□□□□ -1.45
CLIP4-212ENST00000493551 RGS22Q8NE09 1264 aa6.02□□□□□ -1.45
CLIP4-212ENST00000493551 COG3Q96JB2 828 aa6.02□□□□□ -1.45
CLIP4-212ENST00000493551 RNF181Q9P0P0 153 aa6.02□□□□□ -1.45
CLIP4-212ENST00000493551 NUDT5Q9UKK9 219 aa6.02□□□□□ -1.45
CLIP4-212ENST00000493551 EDC4Q6P2E9 1401 aaKnown RBP6.01□□□□□ -1.45
CLIP4-212ENST00000493551 MROH6A6NGR9 719 aa6.01□□□□□ -1.45
CLIP4-212ENST00000493551 PPM1GO15355 546 aaPredicted RBP6.01□□□□□ -1.45
CLIP4-212ENST00000493551 TBC1D8O95759 1140 aa6.01□□□□□ -1.45
CLIP4-212ENST00000493551 RPL13P26373 211 aaKnown RBP6.01□□□□□ -1.45
CLIP4-212ENST00000493551 CHRNA5P30532 468 aa6.01□□□□□ -1.45
CLIP4-212ENST00000493551 L1CAMP32004 1257 aa6.01□□□□□ -1.45
CLIP4-212ENST00000493551 NOP2P46087 812 aaKnown RBP6.01□□□□□ -1.45
CLIP4-212ENST00000493551 SMAD4Q13485 552 aaKnown RBP6.01□□□□□ -1.45
CLIP4-212ENST00000493551 C7orf61Q8IZ16 206 aa6.01□□□□□ -1.45
CLIP4-212ENST00000493551 PIGBQ92521 554 aa6.01□□□□□ -1.45
CLIP4-212ENST00000493551 KLC2Q9H0B6 622 aa6.01□□□□□ -1.45
CLIP4-212ENST00000493551 BCAS3Q9H6U6 928 aa6.01□□□□□ -1.45
CLIP4-212ENST00000493551 EHMT1Q9H9B1 1298 aa6.01□□□□□ -1.45
CLIP4-212ENST00000493551 PARP2Q9UGN5 583 aa6.01□□□□□ -1.45
CLIP4-212ENST00000493551 ASAP1Q9ULH1 1129 aa6.01□□□□□ -1.45
CLIP4-212ENST00000493551 TAF1LQ8IZX4 1826 aa6□□□□□ -1.45
CLIP4-212ENST00000493551 MINDY4BA8MYZ0 360 aa6□□□□□ -1.45
CLIP4-212ENST00000493551 CYP27B1O15528 508 aa6□□□□□ -1.45
CLIP4-212ENST00000493551 EAPPQ56P03 285 aaPredicted RBP6□□□□□ -1.45
CLIP4-212ENST00000493551 HSP90AB2PQ58FF8 381 aa6□□□□□ -1.45
CLIP4-212ENST00000493551 PEX11GQ96HA9 241 aa6□□□□□ -1.45
CLIP4-212ENST00000493551 PTCHD1Q96NR3 888 aa6□□□□□ -1.45
CLIP4-212ENST00000493551 PCDH18Q9HCL0 1135 aa6□□□□□ -1.45
CLIP4-212ENST00000493551 TERF2IPQ9NYB0 399 aa6□□□□□ -1.45
CLIP4-212ENST00000493551 UBR3Q6ZT12 1888 aa6□□□□□ -1.45
CLIP4-212ENST00000493551 PCDH11XQ9BZA7 1347 aa5.99□□□□□ -1.45
CLIP4-212ENST00000493551 PCDH11YQ9BZA8 1340 aa5.99□□□□□ -1.45
CLIP4-212ENST00000493551 H0Y8X5 98 aa5.99□□□□□ -1.45
CLIP4-212ENST00000493551 TNFRSF10CO14798 259 aa5.99□□□□□ -1.45
CLIP4-212ENST00000493551 AMHP03971 560 aa5.99□□□□□ -1.45
CLIP4-212ENST00000493551 CYP2C8P10632 490 aa5.99□□□□□ -1.45
CLIP4-212ENST00000493551 NME1P15531 152 aaKnown RBP5.99□□□□□ -1.45
CLIP4-212ENST00000493551 THBS2P35442 1172 aa5.99□□□□□ -1.45
CLIP4-212ENST00000493551 KLF10Q13118 480 aa5.99□□□□□ -1.45
CLIP4-212ENST00000493551 SURF1Q15526 300 aa5.99□□□□□ -1.45
CLIP4-212ENST00000493551 JMYQ8N9B5 988 aa5.99□□□□□ -1.45
CLIP4-212ENST00000493551 NETO2Q8NC67 525 aa5.99□□□□□ -1.45
CLIP4-212ENST00000493551 DDX11Q96FC9 970 aa5.99□□□□□ -1.45
CLIP4-212ENST00000493551 CARD11Q9BXL7 1154 aa5.99□□□□□ -1.45
CLIP4-212ENST00000493551 RXFP1Q9HBX9 757 aa5.99□□□□□ -1.45
CLIP4-212ENST00000493551 TMOD3Q9NYL9 352 aa5.99□□□□□ -1.45
CLIP4-212ENST00000493551 SRP68Q9UHB9 627 aaKnown RBP5.99□□□□□ -1.45
CLIP4-212ENST00000493551 KIAA1551Q9HCM1 1747 aa5.99□□□□□ -1.45
CLIP4-212ENST00000493551 SMG6Q86US8 1419 aaKnown RBP5.99□□□□□ -1.45
CLIP4-212ENST00000493551 KDM2BQ8NHM5 1336 aa5.99□□□□□ -1.45
CLIP4-212ENST00000493551 SHOXO15266 292 aa5.98□□□□□ -1.45
CLIP4-212ENST00000493551 LAMTOR5O43504 91 aa5.98□□□□□ -1.45
CLIP4-212ENST00000493551 TMF1P82094 1093 aa5.98□□□□□ -1.45
CLIP4-212ENST00000493551 ICAM4Q14773 271 aa5.98□□□□□ -1.45
CLIP4-212ENST00000493551 SMARCC1Q92922 1105 aaPredicted RBP5.98□□□□□ -1.45
CLIP4-212ENST00000493551 KCNQ5Q9NR82 932 aa5.98□□□□□ -1.45
CLIP4-212ENST00000493551 HS3ST3A1Q9Y663 406 aa5.98□□□□□ -1.45
CLIP4-212ENST00000493551 IVNS1ABPQ9Y6Y0 642 aa5.98□□□□□ -1.45
CLIP4-212ENST00000493551 C10orf71Q711Q0 1435 aa5.98□□□□□ -1.45
CLIP4-212ENST00000493551 ITGB4P16144 1822 aa5.97□□□□□ -1.45
CLIP4-212ENST00000493551 PKD1L3Q7Z443 1732 aa5.97□□□□□ -1.45
CLIP4-212ENST00000493551 KCNA3P22001 575 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms