RNA–Protein interactions for RNA: ENST00000493498.1

TRIM50-204, Transcript of tripartite motif containing 50, humanhuman

TSL 4

Gene TRIM50, Length 555 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-204ENST00000493498 SYNE3Q6ZMZ3 975 aa15.5■□□□□ 0.07
TRIM50-204ENST00000493498 RSPH3Q86UC2 560 aa15.5■□□□□ 0.07
TRIM50-204ENST00000493498 GPKOWQ92917 476 aaPredicted RBP eCLIP15.5■□□□□ 0.07
TRIM50-204ENST00000493498 RWDD3Q9Y3V2 267 aa15.5■□□□□ 0.07
TRIM50-204ENST00000493498 KLF18A0A0U1RQI7 1052 aa15.49■□□□□ 0.07
TRIM50-204ENST00000493498 CCDC196A0A1B0GTZ2 297 aa15.49■□□□□ 0.07
TRIM50-204ENST00000493498 CCDC69A6NI79 296 aa15.49■□□□□ 0.07
TRIM50-204ENST00000493498 H3BNC9 293 aa15.49■□□□□ 0.07
TRIM50-204ENST00000493498 NCK2O43639 380 aa15.49■□□□□ 0.07
TRIM50-204ENST00000493498 GPR37L1O60883 481 aa15.49■□□□□ 0.07
TRIM50-204ENST00000493498 LARGE1O95461 756 aa15.49■□□□□ 0.07
TRIM50-204ENST00000493498 EPC2Q52LR7 807 aa15.49■□□□□ 0.07
TRIM50-204ENST00000493498 RPAINQ86UA6 219 aa15.49■□□□□ 0.07
TRIM50-204ENST00000493498 GPRASP2Q96D09 838 aa15.49■□□□□ 0.07
TRIM50-204ENST00000493498 C17orf80Q9BSJ5 609 aa15.49■□□□□ 0.07
TRIM50-204ENST00000493498 IFIH1Q9BYX4 1025 aaKnown RBP15.49■□□□□ 0.07
TRIM50-204ENST00000493498 SETD4Q9NVD3 440 aa15.49■□□□□ 0.07
TRIM50-204ENST00000493498 BRPF3Q9ULD4 1205 aa15.49■□□□□ 0.07
TRIM50-204ENST00000493498 SLC12A7Q9Y666 1083 aa15.49■□□□□ 0.07
TRIM50-204ENST00000493498 ZBTB43O43298 467 aa15.48■□□□□ 0.07
TRIM50-204ENST00000493498 CTSHP09668 335 aa15.48■□□□□ 0.07
TRIM50-204ENST00000493498 KCNA5P22460 613 aa15.48■□□□□ 0.07
TRIM50-204ENST00000493498 ARHGAP4P98171 946 aa15.48■□□□□ 0.07
TRIM50-204ENST00000493498 GPM6BQ13491 265 aa15.48■□□□□ 0.07
TRIM50-204ENST00000493498 ZNF654Q8IZM8 581 aa15.48■□□□□ 0.07
TRIM50-204ENST00000493498 LMBR1Q8WVP7 490 aa15.48■□□□□ 0.07
TRIM50-204ENST00000493498 TNPO1Q92973 898 aaKnown RBP15.48■□□□□ 0.07
TRIM50-204ENST00000493498 LRFN3Q9BTN0 628 aa15.48■□□□□ 0.07
TRIM50-204ENST00000493498 EPHX3Q9H6B9 360 aa15.48■□□□□ 0.07
TRIM50-204ENST00000493498 RTEL1Q9NZ71 1219 aa15.48■□□□□ 0.07
TRIM50-204ENST00000493498 PI4K2BG5E9Z4 385 aa15.47■□□□□ 0.07
TRIM50-204ENST00000493498 MAFGO15525 162 aa15.47■□□□□ 0.07
TRIM50-204ENST00000493498 RB1P06400 928 aa15.47■□□□□ 0.07
TRIM50-204ENST00000493498 ADAM17P78536 824 aa15.47■□□□□ 0.07
TRIM50-204ENST00000493498 HMGN5P82970 282 aaKnown RBP15.47■□□□□ 0.07
TRIM50-204ENST00000493498 ST3GAL1Q11201 340 aa15.47■□□□□ 0.07
TRIM50-204ENST00000493498 SCRN1Q12765 414 aa15.47■□□□□ 0.07
TRIM50-204ENST00000493498 SEMA3FQ13275 785 aa15.47■□□□□ 0.07
TRIM50-204ENST00000493498 UTP14CQ5TAP6 766 aaKnown RBP15.47■□□□□ 0.07
TRIM50-204ENST00000493498 NFXL1Q6ZNB6 911 aa15.47■□□□□ 0.07
TRIM50-204ENST00000493498 TEX2Q8IWB9 1127 aa15.47■□□□□ 0.07
TRIM50-204ENST00000493498 TMEM192Q8IY95 271 aa15.47■□□□□ 0.07
TRIM50-204ENST00000493498 BANK1Q8NDB2 785 aa15.47■□□□□ 0.07
TRIM50-204ENST00000493498 ZFP91Q96JP5 570 aaPredicted RBP15.47■□□□□ 0.07
TRIM50-204ENST00000493498 LMAN2LQ9H0V9 348 aa15.47■□□□□ 0.07
TRIM50-204ENST00000493498 EHMT1Q9H9B1 1298 aa15.47■□□□□ 0.07
TRIM50-204ENST00000493498 SENP2Q9HC62 589 aa15.47■□□□□ 0.07
TRIM50-204ENST00000493498 ERAP1Q9NZ08 941 aa15.47■□□□□ 0.07
TRIM50-204ENST00000493498 CHMP5Q9NZZ3 219 aa15.47■□□□□ 0.07
TRIM50-204ENST00000493498 RAPGEFL1Q9UHV5 662 aa15.47■□□□□ 0.07
TRIM50-204ENST00000493498 MEIS2O14770 477 aa15.46■□□□□ 0.07
TRIM50-204ENST00000493498 UPP2O95045 317 aa15.46■□□□□ 0.07
TRIM50-204ENST00000493498 ALADP13716 330 aa15.46■□□□□ 0.07
TRIM50-204ENST00000493498 NUCB2P80303 420 aa15.46■□□□□ 0.07
TRIM50-204ENST00000493498 PTCRAQ6ISU1 281 aaPredicted RBP15.46■□□□□ 0.07
TRIM50-204ENST00000493498 CPLX2Q6PUV4 134 aaKnown RBP15.46■□□□□ 0.07
TRIM50-204ENST00000493498 USP17L6PQ6QN14 398 aa15.46■□□□□ 0.07
TRIM50-204ENST00000493498 FAM43BQ6ZT52 329 aaPredicted RBP15.46■□□□□ 0.07
TRIM50-204ENST00000493498 TRIM50Q86XT4 487 aa15.46■□□□□ 0.07
TRIM50-204ENST00000493498 CCDC83Q8IWF9 413 aa15.46■□□□□ 0.07
TRIM50-204ENST00000493498 FAM178BQ8IXR5 827 aa15.46■□□□□ 0.07
TRIM50-204ENST00000493498 GJD3Q8N144 294 aa15.46■□□□□ 0.07
TRIM50-204ENST00000493498 FIBCD1Q8N539 461 aa15.46■□□□□ 0.07
TRIM50-204ENST00000493498 PIBF1Q8WXW3 757 aa15.46■□□□□ 0.07
TRIM50-204ENST00000493498 SEPT1Q8WYJ6 367 aa15.46■□□□□ 0.07
TRIM50-204ENST00000493498 PABPC5Q96DU9 382 aaKnown RBP15.46■□□□□ 0.07
TRIM50-204ENST00000493498 LARP6Q9BRS8 491 aaKnown RBP15.46■□□□□ 0.07
TRIM50-204ENST00000493498 NSUN3Q9H649 340 aaKnown RBP15.46■□□□□ 0.07
TRIM50-204ENST00000493498 PSTPIP2Q9H939 334 aa15.46■□□□□ 0.07
TRIM50-204ENST00000493498 RBM28Q9NW13 759 aaKnown RBP15.46■□□□□ 0.07
TRIM50-204ENST00000493498 SMC3Q9UQE7 1217 aa15.46■□□□□ 0.07
TRIM50-204ENST00000493498 KIF3AQ9Y496 699 aa15.46■□□□□ 0.07
TRIM50-204ENST00000493498 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.45■□□□□ 0.06
TRIM50-204ENST00000493498 SPDYE3A6NKU9 549 aa15.45■□□□□ 0.06
TRIM50-204ENST00000493498 GOLGA8BA8MQT2 603 aa15.45■□□□□ 0.06
TRIM50-204ENST00000493498 CDKL5O76039 1030 aa15.45■□□□□ 0.06
TRIM50-204ENST00000493498 PDCP20941 246 aa15.45■□□□□ 0.06
TRIM50-204ENST00000493498 TCF7P36402 384 aaPredicted RBP15.45■□□□□ 0.06
TRIM50-204ENST00000493498 METAP2P50579 478 aaKnown RBP eCLIP15.45■□□□□ 0.06
TRIM50-204ENST00000493498 PPFIA1Q13136 1202 aa15.45■□□□□ 0.06
TRIM50-204ENST00000493498 NECAB1Q8N987 351 aa15.45■□□□□ 0.06
TRIM50-204ENST00000493498 FANCBQ8NB91 859 aa15.45■□□□□ 0.06
TRIM50-204ENST00000493498 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.45■□□□□ 0.06
TRIM50-204ENST00000493498 NEK9Q8TD19 979 aa15.45■□□□□ 0.06
TRIM50-204ENST00000493498 C11orf84Q9BUA3 381 aaPredicted RBP15.45■□□□□ 0.06
TRIM50-204ENST00000493498 SMARCAD1Q9H4L7 1026 aa15.45■□□□□ 0.06
TRIM50-204ENST00000493498 BCAS3Q9H6U6 928 aa15.45■□□□□ 0.06
TRIM50-204ENST00000493498 PRKAG3Q9UGI9 489 aa15.45■□□□□ 0.06
TRIM50-204ENST00000493498 TTC3P53804 2025 aa15.44■□□□□ 0.06
TRIM50-204ENST00000493498 GRXCR2A6NFK2 248 aa15.44■□□□□ 0.06
TRIM50-204ENST00000493498 C5orf67F2Z3F1 127 aa15.44■□□□□ 0.06
TRIM50-204ENST00000493498 SSTR3P32745 418 aaPredicted RBP15.44■□□□□ 0.06
TRIM50-204ENST00000493498 SP4Q02446 784 aa15.44■□□□□ 0.06
TRIM50-204ENST00000493498 MTMR1Q13613 665 aa15.44■□□□□ 0.06
TRIM50-204ENST00000493498 NSUN7Q8NE18 718 aaKnown RBP15.44■□□□□ 0.06
TRIM50-204ENST00000493498 GLG1Q92896 1179 aa15.44■□□□□ 0.06
TRIM50-204ENST00000493498 TUBE1Q9UJT0 475 aa15.44■□□□□ 0.06
TRIM50-204ENST00000493498 SQORQ9Y6N5 450 aa15.44■□□□□ 0.06
TRIM50-204ENST00000493498 MYO7AQ13402 2215 aa15.44■□□□□ 0.06
TRIM50-204ENST00000493498 ADGRA3Q8IWK6 1321 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms