RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 OGDHLQ9ULD0 1010 aa12.97□□□□□ -0.33
LSM2-214ENST00000493387 EMSYQ7Z589 1322 aa12.96□□□□□ -0.33
LSM2-214ENST00000493387 KDM3AQ9Y4C1 1321 aa12.96□□□□□ -0.33
LSM2-214ENST00000493387 A0A1W2PQ27 194 aa12.96□□□□□ -0.33
LSM2-214ENST00000493387 A0A1W2PQ64 194 aa12.96□□□□□ -0.33
LSM2-214ENST00000493387 A0A1W2PQD8 194 aa12.96□□□□□ -0.33
LSM2-214ENST00000493387 MOXD2PA6NHM9 499 aa12.96□□□□□ -0.33
LSM2-214ENST00000493387 KBTBD13C9JR72 458 aa12.96□□□□□ -0.33
LSM2-214ENST00000493387 CTAGE5O15320 804 aa12.96□□□□□ -0.33
LSM2-214ENST00000493387 MYCP01106 439 aaPredicted RBP12.96□□□□□ -0.33
LSM2-214ENST00000493387 TFRCP02786 760 aaKnown RBP12.96□□□□□ -0.33
LSM2-214ENST00000493387 LGALS2P05162 132 aa12.96□□□□□ -0.33
LSM2-214ENST00000493387 RPA1P27694 616 aa12.96□□□□□ -0.33
LSM2-214ENST00000493387 CCT6AP40227 531 aaKnown RBP12.96□□□□□ -0.33
LSM2-214ENST00000493387 GJA8P48165 433 aa12.96□□□□□ -0.33
LSM2-214ENST00000493387 STAT5BP51692 787 aa12.96□□□□□ -0.33
LSM2-214ENST00000493387 AXDND1Q5T1B0 1012 aaPredicted RBP12.96□□□□□ -0.33
LSM2-214ENST00000493387 UTP14CQ5TAP6 766 aaKnown RBP12.96□□□□□ -0.33
LSM2-214ENST00000493387 SWSAP1Q6NVH7 229 aa12.96□□□□□ -0.33
LSM2-214ENST00000493387 PDXDC2PQ6P474 469 aa12.96□□□□□ -0.33
LSM2-214ENST00000493387 SNX29Q8TEQ0 813 aa12.96□□□□□ -0.33
LSM2-214ENST00000493387 U2AF1L4Q8WU68 220 aaKnown RBP12.96□□□□□ -0.33
LSM2-214ENST00000493387 GLG1Q92896 1179 aa12.96□□□□□ -0.33
LSM2-214ENST00000493387 CALML4Q96GE6 196 aa12.96□□□□□ -0.33
LSM2-214ENST00000493387 FAM167AQ96KS9 214 aa12.96□□□□□ -0.33
LSM2-214ENST00000493387 CLIC6Q96NY7 704 aa12.96□□□□□ -0.33
LSM2-214ENST00000493387 HSD17B14Q9BPX1 270 aa12.96□□□□□ -0.33
LSM2-214ENST00000493387 PYM1Q9BRP8 204 aaKnown RBP12.96□□□□□ -0.33
LSM2-214ENST00000493387 MTG1Q9BT17 334 aaPredicted RBP12.96□□□□□ -0.33
LSM2-214ENST00000493387 KATNAL1Q9BW62 490 aa12.96□□□□□ -0.33
LSM2-214ENST00000493387 NT5C3AQ9H0P0 336 aa12.96□□□□□ -0.33
LSM2-214ENST00000493387 ZSWIM4Q9H7M6 989 aa12.96□□□□□ -0.33
LSM2-214ENST00000493387 GDPD2Q9HCC8 539 aa12.96□□□□□ -0.33
LSM2-214ENST00000493387 ERAP1Q9NZ08 941 aa12.96□□□□□ -0.33
LSM2-214ENST00000493387 GABBR1Q9UBS5 961 aa12.96□□□□□ -0.33
LSM2-214ENST00000493387 CCDC39Q9UFE4 941 aa12.96□□□□□ -0.33
LSM2-214ENST00000493387 MAFBQ9Y5Q3 323 aaPredicted RBP12.96□□□□□ -0.33
LSM2-214ENST00000493387 TCHHQ07283 1943 aa12.96□□□□□ -0.34
LSM2-214ENST00000493387 POTEFA5A3E0 1075 aa12.95□□□□□ -0.34
LSM2-214ENST00000493387 DNM1LO00429 736 aa12.95□□□□□ -0.34
LSM2-214ENST00000493387 SLITRK3O94933 977 aa12.95□□□□□ -0.34
LSM2-214ENST00000493387 LYPLA2O95372 231 aa12.95□□□□□ -0.34
LSM2-214ENST00000493387 MYCNP04198 464 aaPredicted RBP12.95□□□□□ -0.34
LSM2-214ENST00000493387 MYL3P08590 195 aa12.95□□□□□ -0.34
LSM2-214ENST00000493387 XRCC6P12956 609 aaKnown RBP eCLIP12.95□□□□□ -0.34
LSM2-214ENST00000493387 PTGS1P23219 599 aa12.95□□□□□ -0.34
LSM2-214ENST00000493387 CMA1P23946 247 aa12.95□□□□□ -0.34
LSM2-214ENST00000493387 BEX3Q00994 111 aa12.95□□□□□ -0.34
LSM2-214ENST00000493387 GRIN1Q05586 938 aa12.95□□□□□ -0.34
LSM2-214ENST00000493387 KCNA10Q16322 511 aa12.95□□□□□ -0.34
LSM2-214ENST00000493387 CCSAPQ6IQ19 270 aaPredicted RBP12.95□□□□□ -0.34
LSM2-214ENST00000493387 CABP7Q86V35 215 aa12.95□□□□□ -0.34
LSM2-214ENST00000493387 C4orf19Q8IY42 314 aa12.95□□□□□ -0.34
LSM2-214ENST00000493387 ANKLE1Q8NAG6 615 aa12.95□□□□□ -0.34
LSM2-214ENST00000493387 RASSF8Q8NHQ8 419 aa12.95□□□□□ -0.34
LSM2-214ENST00000493387 CDK5RAP3Q96JB5 506 aa12.95□□□□□ -0.34
LSM2-214ENST00000493387 SEZ6LQ9BYH1 1024 aa12.95□□□□□ -0.34
LSM2-214ENST00000493387 NRBP2Q9NSY0 501 aa12.95□□□□□ -0.34
LSM2-214ENST00000493387 IGSF9BQ9UPX0 1349 aa12.94□□□□□ -0.34
LSM2-214ENST00000493387 MYADML2A6NDP7 307 aa12.94□□□□□ -0.34
LSM2-214ENST00000493387 H3BRB1 525 aa12.94□□□□□ -0.34
LSM2-214ENST00000493387 PURAQ00577 322 aaKnown RBP12.94□□□□□ -0.34
LSM2-214ENST00000493387 XKR3Q5GH77 459 aa12.94□□□□□ -0.34
LSM2-214ENST00000493387 HYIQ5T013 277 aa12.94□□□□□ -0.34
LSM2-214ENST00000493387 RESP18Q5W5W9 173 aa12.94□□□□□ -0.34
LSM2-214ENST00000493387 CCDC73Q6ZRK6 1079 aa12.94□□□□□ -0.34
LSM2-214ENST00000493387 OTUD6AQ7L8S5 288 aa12.94□□□□□ -0.34
LSM2-214ENST00000493387 CATSPER3Q86XQ3 398 aa12.94□□□□□ -0.34
LSM2-214ENST00000493387 CCDC60Q8IWA6 550 aaPredicted RBP12.94□□□□□ -0.34
LSM2-214ENST00000493387 TPH2Q8IWU9 490 aa12.94□□□□□ -0.34
LSM2-214ENST00000493387 CKAP2LQ8IYA6 745 aa12.94□□□□□ -0.34
LSM2-214ENST00000493387 SYMPKQ92797 1274 aaKnown RBP12.94□□□□□ -0.34
LSM2-214ENST00000493387 DYDC2Q96IM9 177 aa12.94□□□□□ -0.34
LSM2-214ENST00000493387 NACC1Q96RE7 527 aa12.94□□□□□ -0.34
LSM2-214ENST00000493387 PCYT2Q99447 389 aa12.94□□□□□ -0.34
LSM2-214ENST00000493387 LXNQ9BS40 222 aa12.94□□□□□ -0.34
LSM2-214ENST00000493387 C16orf70Q9BSU1 422 aa12.94□□□□□ -0.34
LSM2-214ENST00000493387 TUT1Q9H6E5 874 aaKnown RBP12.94□□□□□ -0.34
LSM2-214ENST00000493387 RGL1Q9NZL6 768 aa12.94□□□□□ -0.34
LSM2-214ENST00000493387 PHF24Q9UPV7 400 aa12.94□□□□□ -0.34
LSM2-214ENST00000493387 PP2D1A8MPX8 630 aa12.93□□□□□ -0.34
LSM2-214ENST00000493387 HBP1O60381 514 aa12.93□□□□□ -0.34
LSM2-214ENST00000493387 F2P00734 622 aa12.93□□□□□ -0.34
LSM2-214ENST00000493387 ASGR1P07306 291 aa12.93□□□□□ -0.34
LSM2-214ENST00000493387 SPATA31C1P0DKV0 1188 aa12.93□□□□□ -0.34
LSM2-214ENST00000493387 CDC25AP30304 524 aa12.93□□□□□ -0.34
LSM2-214ENST00000493387 ACLYP53396 1101 aa12.93□□□□□ -0.34
LSM2-214ENST00000493387 UBE2HP62256 183 aa12.93□□□□□ -0.34
LSM2-214ENST00000493387 CYP4A11Q02928 519 aa12.93□□□□□ -0.34
LSM2-214ENST00000493387 CTTNQ14247 550 aaKnown RBP12.93□□□□□ -0.34
LSM2-214ENST00000493387 SHC4Q6S5L8 630 aa12.93□□□□□ -0.34
LSM2-214ENST00000493387 BANK1Q8NDB2 785 aa12.93□□□□□ -0.34
LSM2-214ENST00000493387 ATP8B4Q8TF62 1192 aa12.93□□□□□ -0.34
LSM2-214ENST00000493387 BBXQ8WY36 941 aaPredicted RBP12.93□□□□□ -0.34
LSM2-214ENST00000493387 MRPS27Q92552 414 aaKnown RBP12.93□□□□□ -0.34
LSM2-214ENST00000493387 EPSTI1Q96J88 318 aa12.93□□□□□ -0.34
LSM2-214ENST00000493387 GLT1D1Q96MS3 346 aa12.93□□□□□ -0.34
LSM2-214ENST00000493387 MMTAG2Q9BU76 263 aaKnown RBP12.93□□□□□ -0.34
LSM2-214ENST00000493387 USP25Q9UHP3 1055 aa12.93□□□□□ -0.34
LSM2-214ENST00000493387 DNM3Q9UQ16 869 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms