RNA–Protein interactions for RNA: ENST00000493256.1

LYSMD4-208, Transcript of LysM domain containing 4, humanhuman

TSL 3

Gene LYSMD4, Length 880 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-208ENST00000493256 IFIH1Q9BYX4 1025 aaKnown RBP25.31■■□□□ 1.64
LYSMD4-208ENST00000493256 SNX14Q9Y5W7 946 aa25.31■■□□□ 1.64
LYSMD4-208ENST00000493256 BRWD1Q9NSI6 2320 aa25.31■■□□□ 1.64
LYSMD4-208ENST00000493256 NFASCO94856 1347 aa25.31■■□□□ 1.64
LYSMD4-208ENST00000493256 HSPA4P34932 840 aa25.3■■□□□ 1.64
LYSMD4-208ENST00000493256 SREBF1P36956 1147 aa25.3■■□□□ 1.64
LYSMD4-208ENST00000493256 MGAT3Q09327 533 aa25.3■■□□□ 1.64
LYSMD4-208ENST00000493256 ITGB3BPQ13352 177 aaPredicted RBP25.3■■□□□ 1.64
LYSMD4-208ENST00000493256 AP3B2Q13367 1082 aa25.3■■□□□ 1.64
LYSMD4-208ENST00000493256 Q6ZUG5 572 aa25.3■■□□□ 1.64
LYSMD4-208ENST00000493256 IL27Q8NEV9 243 aa25.3■■□□□ 1.64
LYSMD4-208ENST00000493256 SP7Q8TDD2 431 aaPredicted RBP25.3■■□□□ 1.64
LYSMD4-208ENST00000493256 APBB2Q92870 758 aa25.3■■□□□ 1.64
LYSMD4-208ENST00000493256 TOP1MTQ969P6 601 aa25.3■■□□□ 1.64
LYSMD4-208ENST00000493256 CCDC136Q96JN2 1154 aa25.3■■□□□ 1.64
LYSMD4-208ENST00000493256 SDF4Q9BRK5 362 aa25.3■■□□□ 1.64
LYSMD4-208ENST00000493256 GLT8D2Q9H1C3 349 aa25.3■■□□□ 1.64
LYSMD4-208ENST00000493256 TCF20Q9UGU0 1960 aaKnown RBP25.29■■□□□ 1.64
LYSMD4-208ENST00000493256 GHRP10912 638 aa25.29■■□□□ 1.64
LYSMD4-208ENST00000493256 ACTR2P61160 394 aa25.29■■□□□ 1.64
LYSMD4-208ENST00000493256 PFKFB3Q16875 520 aaPredicted RBP25.29■■□□□ 1.64
LYSMD4-208ENST00000493256 BRF1Q92994 677 aa25.29■■□□□ 1.64
LYSMD4-208ENST00000493256 ZBTB10Q96DT7 871 aa25.29■■□□□ 1.64
LYSMD4-208ENST00000493256 UHRF1Q96T88 793 aaPredicted RBP25.29■■□□□ 1.64
LYSMD4-208ENST00000493256 C17orf80Q9BSJ5 609 aa25.29■■□□□ 1.64
LYSMD4-208ENST00000493256 AGO4Q9HCK5 861 aaKnown RBP25.29■■□□□ 1.64
LYSMD4-208ENST00000493256 LMCD1Q9NZU5 365 aa25.29■■□□□ 1.64
LYSMD4-208ENST00000493256 MEIS1O00470 390 aa25.28■■□□□ 1.64
LYSMD4-208ENST00000493256 UPP2O95045 317 aa25.28■■□□□ 1.64
LYSMD4-208ENST00000493256 BMP1P13497 986 aa25.28■■□□□ 1.64
LYSMD4-208ENST00000493256 SCG2P13521 617 aa25.28■■□□□ 1.64
LYSMD4-208ENST00000493256 IGBP1P78318 339 aa25.28■■□□□ 1.64
LYSMD4-208ENST00000493256 AAK1Q2M2I8 961 aa25.28■■□□□ 1.64
LYSMD4-208ENST00000493256 BLOC1S2Q6QNY1 142 aa25.28■■□□□ 1.64
LYSMD4-208ENST00000493256 RSPH3Q86UC2 560 aa25.28■■□□□ 1.64
LYSMD4-208ENST00000493256 DNAJB3Q8WWF6 145 aa25.28■■□□□ 1.64
LYSMD4-208ENST00000493256 AZI2Q9H6S1 392 aa25.28■■□□□ 1.64
LYSMD4-208ENST00000493256 NID2Q14112 1375 aa25.28■■□□□ 1.64
LYSMD4-208ENST00000493256 CCDC196A0A1B0GTZ2 297 aa25.27■■□□□ 1.64
LYSMD4-208ENST00000493256 INSRRP14616 1297 aa25.27■■□□□ 1.64
LYSMD4-208ENST00000493256 KCNQ1P51787 676 aa25.27■■□□□ 1.64
LYSMD4-208ENST00000493256 LPIN1Q14693 890 aa25.27■■□□□ 1.64
LYSMD4-208ENST00000493256 JAKMIP3Q5VZ66 844 aa25.27■■□□□ 1.64
LYSMD4-208ENST00000493256 FBXO22Q8NEZ5 403 aa25.27■■□□□ 1.64
LYSMD4-208ENST00000493256 YME1L1Q96TA2 773 aa25.27■■□□□ 1.64
LYSMD4-208ENST00000493256 COG5Q9UP83 839 aa25.27■■□□□ 1.64
LYSMD4-208ENST00000493256 RRN3P2A6NIE6 340 aa25.26■■□□□ 1.63
LYSMD4-208ENST00000493256 TRPC6Q9Y210 931 aa25.26■■□□□ 1.63
LYSMD4-208ENST00000493256 CDY2AQ9Y6F7 541 aa25.26■■□□□ 1.63
LYSMD4-208ENST00000493256 COL4A6Q14031 1691 aa25.26■■□□□ 1.63
LYSMD4-208ENST00000493256 ADAMTS3O15072 1205 aa25.25■■□□□ 1.63
LYSMD4-208ENST00000493256 RPS6KB1P23443 525 aa25.25■■□□□ 1.63
LYSMD4-208ENST00000493256 ZNF76P36508 570 aa25.25■■□□□ 1.63
LYSMD4-208ENST00000493256 PLCB4Q15147 1175 aa25.25■■□□□ 1.63
LYSMD4-208ENST00000493256 PKN1Q16512 942 aa25.25■■□□□ 1.63
LYSMD4-208ENST00000493256 NIPA1Q7RTP0 329 aa25.25■■□□□ 1.63
LYSMD4-208ENST00000493256 PLPPR4Q7Z2D5 763 aa25.25■■□□□ 1.63
LYSMD4-208ENST00000493256 FBXL16Q8N461 479 aa25.25■■□□□ 1.63
LYSMD4-208ENST00000493256 HLA-CQ95604 372 aa25.25■■□□□ 1.63
LYSMD4-208ENST00000493256 NECAB3Q96P71 396 aaPredicted RBP25.25■■□□□ 1.63
LYSMD4-208ENST00000493256 FAM49AQ9H0Q0 323 aaPredicted RBP25.25■■□□□ 1.63
LYSMD4-208ENST00000493256 ESYT2A0FGR8 921 aa25.24■■□□□ 1.63
LYSMD4-208ENST00000493256 FAM86B1E9PN63 330 aa25.24■■□□□ 1.63
LYSMD4-208ENST00000493256 ATG7O95352 703 aa25.24■■□□□ 1.63
LYSMD4-208ENST00000493256 CCNE2O96020 404 aa25.24■■□□□ 1.63
LYSMD4-208ENST00000493256 FAM86B2P0C5J1 330 aa25.24■■□□□ 1.63
LYSMD4-208ENST00000493256 STAT5BP51692 787 aa25.24■■□□□ 1.63
LYSMD4-208ENST00000493256 MRPS6P82932 125 aaKnown RBP25.24■■□□□ 1.63
LYSMD4-208ENST00000493256 FBXO47Q5MNV8 452 aa25.24■■□□□ 1.63
LYSMD4-208ENST00000493256 TRAPPC12Q8WVT3 735 aa25.24■■□□□ 1.63
LYSMD4-208ENST00000493256 CRYGNQ8WXF5 182 aa25.24■■□□□ 1.63
LYSMD4-208ENST00000493256 AGXT2Q9BYV1 514 aa25.24■■□□□ 1.63
LYSMD4-208ENST00000493256 ZMYND12Q9H0C1 365 aa25.24■■□□□ 1.63
LYSMD4-208ENST00000493256 REC8O95072 547 aa25.23■■□□□ 1.63
LYSMD4-208ENST00000493256 EPC2Q52LR7 807 aa25.23■■□□□ 1.63
LYSMD4-208ENST00000493256 TSHZ1Q6ZSZ6 1077 aa25.23■■□□□ 1.63
LYSMD4-208ENST00000493256 PLA2G4DQ86XP0 818 aa25.23■■□□□ 1.63
LYSMD4-208ENST00000493256 PHKBQ93100 1093 aa25.23■■□□□ 1.63
LYSMD4-208ENST00000493256 SAMD11Q96NU1 681 aa25.23■■□□□ 1.63
LYSMD4-208ENST00000493256 NLRC5Q86WI3 1866 aa25.22■■□□□ 1.63
LYSMD4-208ENST00000493256 IGLV3-22A0A075B6J6 115 aa25.22■■□□□ 1.63
LYSMD4-208ENST00000493256 IGKV6D-21A0A0A0MT36 114 aa25.22■■□□□ 1.63
LYSMD4-208ENST00000493256 DDX39AO00148 427 aaKnown RBP25.22■■□□□ 1.63
LYSMD4-208ENST00000493256 PRPF3O43395 683 aaKnown RBP25.22■■□□□ 1.63
LYSMD4-208ENST00000493256 RPLP2P05387 115 aaKnown RBP25.22■■□□□ 1.63
LYSMD4-208ENST00000493256 CYP3A4P08684 503 aa25.22■■□□□ 1.63
LYSMD4-208ENST00000493256 TNPO1Q92973 898 aaKnown RBP25.22■■□□□ 1.63
LYSMD4-208ENST00000493256 AGO3Q9H9G7 860 aaKnown RBP25.22■■□□□ 1.63
LYSMD4-208ENST00000493256 C6orf50Q9HD87 102 aa25.22■■□□□ 1.63
LYSMD4-208ENST00000493256 PCDHA2Q9Y5H9 948 aa25.22■■□□□ 1.63
LYSMD4-208ENST00000493256 POTEB3A0JP26 581 aa25.21■■□□□ 1.63
LYSMD4-208ENST00000493256 PPFIA3O75145 1194 aa25.21■■□□□ 1.63
LYSMD4-208ENST00000493256 POTEBQ6S5H4 581 aa25.21■■□□□ 1.63
LYSMD4-208ENST00000493256 ABHD15Q6UXT9 468 aa25.21■■□□□ 1.63
LYSMD4-208ENST00000493256 REXO1Q8N1G1 1221 aaKnown RBP25.21■■□□□ 1.63
LYSMD4-208ENST00000493256 CCDC12Q8WUD4 166 aaPredicted RBP25.21■■□□□ 1.63
LYSMD4-208ENST00000493256 UIMC1Q96RL1 719 aa25.21■■□□□ 1.63
LYSMD4-208ENST00000493256 ENPP3O14638 875 aa25.2■■□□□ 1.62
LYSMD4-208ENST00000493256 DHX15O43143 795 aaKnown RBP25.2■■□□□ 1.62
LYSMD4-208ENST00000493256 PSMA5P28066 241 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms