RNA–Protein interactions for RNA: ENST00000492973.1

TPR-208, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-208ENST00000492973 FBXL18Q96ME1 805 aa8.38□□□□□ -1.07
TPR-208ENST00000492973 KREMEN1Q96MU8 473 aa8.38□□□□□ -1.07
TPR-208ENST00000492973 FERD3LQ96RJ6 166 aa8.38□□□□□ -1.07
TPR-208ENST00000492973 EYA3Q99504 573 aa8.38□□□□□ -1.07
TPR-208ENST00000492973 VPS33BQ9H267 617 aa8.38□□□□□ -1.07
TPR-208ENST00000492973 ARFGEF1Q9Y6D6 1849 aa8.38□□□□□ -1.07
TPR-208ENST00000492973 LTBP1Q14766 1721 aa8.37□□□□□ -1.07
TPR-208ENST00000492973 MED23Q9ULK4 1368 aa8.37□□□□□ -1.07
TPR-208ENST00000492973 FAM155AB1AL88 458 aaPredicted RBP8.37□□□□□ -1.07
TPR-208ENST00000492973 POLR2BP30876 1174 aaKnown RBP8.37□□□□□ -1.07
TPR-208ENST00000492973 KCNJ4P48050 445 aa8.37□□□□□ -1.07
TPR-208ENST00000492973 TNK2Q07912 1038 aa8.37□□□□□ -1.07
TPR-208ENST00000492973 PUM3Q15397 648 aaKnown RBP8.37□□□□□ -1.07
TPR-208ENST00000492973 ATP2B3Q16720 1220 aa8.37□□□□□ -1.07
TPR-208ENST00000492973 ZNF574Q6ZN55 896 aaPredicted RBP8.37□□□□□ -1.07
TPR-208ENST00000492973 FLCNQ8NFG4 579 aa8.37□□□□□ -1.07
TPR-208ENST00000492973 PIWIL2Q8TC59 973 aaKnown RBP8.37□□□□□ -1.07
TPR-208ENST00000492973 DBNDD1Q9H9R9 158 aa8.37□□□□□ -1.07
TPR-208ENST00000492973 SEMA3GQ9NS98 782 aa8.37□□□□□ -1.07
TPR-208ENST00000492973 INPP5FQ9Y2H2 1132 aa8.37□□□□□ -1.07
TPR-208ENST00000492973 MYH3P11055 1940 aa8.37□□□□□ -1.07
TPR-208ENST00000492973 ZNF541Q9H0D2 1346 aa8.36□□□□□ -1.07
TPR-208ENST00000492973 YDJCA8MPS7 323 aa8.36□□□□□ -1.07
TPR-208ENST00000492973 FZD9O00144 591 aa8.36□□□□□ -1.07
TPR-208ENST00000492973 ADORA1P30542 326 aa8.36□□□□□ -1.07
TPR-208ENST00000492973 GBP1P32455 592 aa8.36□□□□□ -1.07
TPR-208ENST00000492973 CD96P40200 585 aa8.36□□□□□ -1.07
TPR-208ENST00000492973 CCNFP41002 786 aa8.36□□□□□ -1.07
TPR-208ENST00000492973 GYG1P46976 350 aa8.36□□□□□ -1.07
TPR-208ENST00000492973 TIMM10P62072 90 aa8.36□□□□□ -1.07
TPR-208ENST00000492973 NUCB1Q02818 461 aa8.36□□□□□ -1.07
TPR-208ENST00000492973 OS9Q13438 667 aaPredicted RBP8.36□□□□□ -1.07
TPR-208ENST00000492973 ANKRD45Q5TZF3 282 aa8.36□□□□□ -1.07
TPR-208ENST00000492973 SKAP1Q86WV1 359 aa8.36□□□□□ -1.07
TPR-208ENST00000492973 NIM1KQ8IY84 436 aa8.36□□□□□ -1.07
TPR-208ENST00000492973 LPIN2Q92539 896 aa8.36□□□□□ -1.07
TPR-208ENST00000492973 FAM84BQ96KN1 310 aaPredicted RBP8.36□□□□□ -1.07
TPR-208ENST00000492973 HSPA12BQ96MM6 686 aa8.36□□□□□ -1.07
TPR-208ENST00000492973 ASPNQ9BXN1 380 aa8.36□□□□□ -1.07
TPR-208ENST00000492973 GPR108Q9NPR9 543 aa8.36□□□□□ -1.07
TPR-208ENST00000492973 OAS3Q9Y6K5 1087 aaKnown RBP8.36□□□□□ -1.07
TPR-208ENST00000492973 FER1L6Q2WGJ9 1857 aa8.35□□□□□ -1.07
TPR-208ENST00000492973 A0A1B0GUL7 405 aa8.35□□□□□ -1.07
TPR-208ENST00000492973 ECE2O60344 883 aa8.35□□□□□ -1.07
TPR-208ENST00000492973 RAB11FIP3O75154 756 aa8.35□□□□□ -1.07
TPR-208ENST00000492973 IFIT1P09914 478 aaKnown RBP8.35□□□□□ -1.07
TPR-208ENST00000492973 ACRP10323 421 aa8.35□□□□□ -1.07
TPR-208ENST00000492973 CD8BP10966 210 aa8.35□□□□□ -1.07
TPR-208ENST00000492973 SLC5A1P13866 664 aa8.35□□□□□ -1.07
TPR-208ENST00000492973 HSP90AB4PQ58FF6 505 aa8.35□□□□□ -1.07
TPR-208ENST00000492973 TNNI3KQ59H18 835 aa8.35□□□□□ -1.07
TPR-208ENST00000492973 CCDC81Q6ZN84 652 aa8.35□□□□□ -1.07
TPR-208ENST00000492973 ERC1Q8IUD2 1116 aa8.35□□□□□ -1.07
TPR-208ENST00000492973 TAB3Q8N5C8 712 aaPredicted RBP8.35□□□□□ -1.07
TPR-208ENST00000492973 DTWD2Q8NBA8 298 aa8.35□□□□□ -1.07
TPR-208ENST00000492973 ASB11Q8WXH4 323 aa8.35□□□□□ -1.07
TPR-208ENST00000492973 JDP2Q8WYK2 163 aa8.35□□□□□ -1.07
TPR-208ENST00000492973 EAF2Q96CJ1 260 aaPredicted RBP8.35□□□□□ -1.07
TPR-208ENST00000492973 SEC16BQ96JE7 1060 aa8.35□□□□□ -1.07
TPR-208ENST00000492973 SLC9A7Q96T83 725 aa8.35□□□□□ -1.07
TPR-208ENST00000492973 COA1Q9GZY4 146 aa8.35□□□□□ -1.07
TPR-208ENST00000492973 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.35□□□□□ -1.07
TPR-208ENST00000492973 CD209Q9NNX6 404 aa8.35□□□□□ -1.07
TPR-208ENST00000492973 IL1RAPL2Q9NP60 686 aa8.35□□□□□ -1.07
TPR-208ENST00000492973 FPGT-TNNI3KV9GXZ4 949 aa8.35□□□□□ -1.07
TPR-208ENST00000492973 SMARCA5O60264 1052 aaPredicted RBP8.34□□□□□ -1.07
TPR-208ENST00000492973 RAD17O75943 681 aa8.34□□□□□ -1.07
TPR-208ENST00000492973 IL1R1P14778 569 aa8.34□□□□□ -1.07
TPR-208ENST00000492973 HIBADHP31937 336 aaKnown RBP8.34□□□□□ -1.07
TPR-208ENST00000492973 PHKA1P46020 1223 aa8.34□□□□□ -1.07
TPR-208ENST00000492973 NASPP49321 788 aaPredicted RBP8.34□□□□□ -1.07
TPR-208ENST00000492973 CXCL9Q07325 125 aa8.34□□□□□ -1.07
TPR-208ENST00000492973 CDKAL1Q5VV42 579 aa8.34□□□□□ -1.07
TPR-208ENST00000492973 THAP5Q7Z6K1 395 aa8.34□□□□□ -1.07
TPR-208ENST00000492973 CHD1LQ86WJ1 897 aa8.34□□□□□ -1.07
TPR-208ENST00000492973 LSRQ86X29 649 aaPredicted RBP8.34□□□□□ -1.07
TPR-208ENST00000492973 TDRD7Q8NHU6 1098 aaKnown RBP8.34□□□□□ -1.07
TPR-208ENST00000492973 KIF1BPQ96EK5 621 aa8.34□□□□□ -1.07
TPR-208ENST00000492973 TM9SF2Q99805 663 aa8.34□□□□□ -1.07
TPR-208ENST00000492973 ZNF609O15014 1411 aa8.34□□□□□ -1.07
TPR-208ENST00000492973 CACNA1SQ13698 1873 aa8.34□□□□□ -1.07
TPR-208ENST00000492973 LRRN2O75325 713 aa8.33□□□□□ -1.08
TPR-208ENST00000492973 DDNO94850 711 aaPredicted RBP8.33□□□□□ -1.08
TPR-208ENST00000492973 FBXW10Q5XX13 1052 aa8.33□□□□□ -1.08
TPR-208ENST00000492973 ZNF804AQ7Z570 1209 aa8.33□□□□□ -1.08
TPR-208ENST00000492973 C16orf71Q8IYS4 520 aaPredicted RBP8.33□□□□□ -1.08
TPR-208ENST00000492973 ABI1Q8IZP0 508 aa8.33□□□□□ -1.08
TPR-208ENST00000492973 AGBL5Q8NDL9 886 aa8.33□□□□□ -1.08
TPR-208ENST00000492973 NEUROD6Q96NK8 337 aa8.33□□□□□ -1.08
TPR-208ENST00000492973 TINF2Q9BSI4 451 aa8.33□□□□□ -1.08
TPR-208ENST00000492973 LNPKQ9C0E8 428 aa8.33□□□□□ -1.08
TPR-208ENST00000492973 CCDC8Q9H0W5 538 aaPredicted RBP8.33□□□□□ -1.08
TPR-208ENST00000492973 DBNLQ9UJU6 430 aaKnown RBP8.33□□□□□ -1.08
TPR-208ENST00000492973 GLTPD2A6NH11 291 aa8.32□□□□□ -1.08
TPR-208ENST00000492973 H3BS24 57 aa8.32□□□□□ -1.08
TPR-208ENST00000492973 PSMD14O00487 310 aa8.32□□□□□ -1.08
TPR-208ENST00000492973 VIL1P09327 827 aaKnown RBP8.32□□□□□ -1.08
TPR-208ENST00000492973 SRFP11831 508 aa8.32□□□□□ -1.08
TPR-208ENST00000492973 ATF4P18848 351 aaPredicted RBP8.32□□□□□ -1.08
TPR-208ENST00000492973 FUT4P22083 530 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms