RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 MARK3P27448 753 aa14.2□□□□□ -0.14
COL6A1-205ENST00000492851 ADD1P35611 737 aaKnown RBP14.2□□□□□ -0.14
COL6A1-205ENST00000492851 CLK2P49760 499 aaKnown RBP14.2□□□□□ -0.14
COL6A1-205ENST00000492851 STAT5BP51692 787 aa14.2□□□□□ -0.14
COL6A1-205ENST00000492851 ACTR2P61160 394 aa14.2□□□□□ -0.14
COL6A1-205ENST00000492851 Q6ZUG5 572 aa14.2□□□□□ -0.14
COL6A1-205ENST00000492851 FBXO22Q8NEZ5 403 aa14.2□□□□□ -0.14
COL6A1-205ENST00000492851 BICD2Q8TD16 824 aa14.2□□□□□ -0.14
COL6A1-205ENST00000492851 TCEANC2Q96MN5 208 aa14.2□□□□□ -0.14
COL6A1-205ENST00000492851 FTHL17Q9BXU8 183 aa14.2□□□□□ -0.14
COL6A1-205ENST00000492851 AGO4Q9HCK5 861 aaKnown RBP14.2□□□□□ -0.14
COL6A1-205ENST00000492851 FAM217BQ9NTX9 383 aaPredicted RBP14.2□□□□□ -0.14
COL6A1-205ENST00000492851 TRIP12Q14669 1992 aaPredicted RBP14.2□□□□□ -0.14
COL6A1-205ENST00000492851 PRPF3O43395 683 aaKnown RBP14.19□□□□□ -0.14
COL6A1-205ENST00000492851 ATG7O95352 703 aa14.19□□□□□ -0.14
COL6A1-205ENST00000492851 CHRNA1P02708 482 aa14.19□□□□□ -0.14
COL6A1-205ENST00000492851 CYP3A4P08684 503 aa14.19□□□□□ -0.14
COL6A1-205ENST00000492851 SCG2P13521 617 aa14.19□□□□□ -0.14
COL6A1-205ENST00000492851 INSRRP14616 1297 aa14.19□□□□□ -0.14
COL6A1-205ENST00000492851 CDC27P30260 824 aa14.19□□□□□ -0.14
COL6A1-205ENST00000492851 MARCH8Q5T0T0 291 aa14.19□□□□□ -0.14
COL6A1-205ENST00000492851 FAM160B1Q5W0V3 765 aa14.19□□□□□ -0.14
COL6A1-205ENST00000492851 TYW1BQ6NUM6 668 aa14.19□□□□□ -0.14
COL6A1-205ENST00000492851 CYP2W1Q8TAV3 490 aa14.19□□□□□ -0.14
COL6A1-205ENST00000492851 DNAJB3Q8WWF6 145 aa14.19□□□□□ -0.14
COL6A1-205ENST00000492851 IL17RAQ96F46 866 aa14.19□□□□□ -0.14
COL6A1-205ENST00000492851 JAKMIP1Q96N16 626 aaKnown RBP14.19□□□□□ -0.14
COL6A1-205ENST00000492851 ZMYND12Q9H0C1 365 aa14.19□□□□□ -0.14
COL6A1-205ENST00000492851 TBC1D22BQ9NU19 505 aa14.19□□□□□ -0.14
COL6A1-205ENST00000492851 RNF216Q9NWF9 866 aaPredicted RBP14.19□□□□□ -0.14
COL6A1-205ENST00000492851 MTUS1Q9ULD2 1270 aa14.19□□□□□ -0.14
COL6A1-205ENST00000492851 TRPC6Q9Y210 931 aa14.19□□□□□ -0.14
COL6A1-205ENST00000492851 RWDD3Q9Y3V2 267 aa14.19□□□□□ -0.14
COL6A1-205ENST00000492851 TELO2Q9Y4R8 837 aa14.19□□□□□ -0.14
COL6A1-205ENST00000492851 PCDHA2Q9Y5H9 948 aa14.19□□□□□ -0.14
COL6A1-205ENST00000492851 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.18□□□□□ -0.14
COL6A1-205ENST00000492851 UPP2O95045 317 aa14.18□□□□□ -0.14
COL6A1-205ENST00000492851 RB1P06400 928 aa14.18□□□□□ -0.14
COL6A1-205ENST00000492851 ARP10275 920 aa14.18□□□□□ -0.14
COL6A1-205ENST00000492851 MGAT3Q09327 533 aa14.18□□□□□ -0.14
COL6A1-205ENST00000492851 TSHZ1Q6ZSZ6 1077 aa14.18□□□□□ -0.14
COL6A1-205ENST00000492851 BRF1Q92994 677 aa14.18□□□□□ -0.14
COL6A1-205ENST00000492851 TCEAL9Q9UHQ7 104 aa14.18□□□□□ -0.14
COL6A1-205ENST00000492851 SNX14Q9Y5W7 946 aa14.18□□□□□ -0.14
COL6A1-205ENST00000492851 PRUNE2Q8WUY3 3088 aa14.18□□□□□ -0.14
COL6A1-205ENST00000492851 IGKV6D-21A0A0A0MT36 114 aa14.17□□□□□ -0.14
COL6A1-205ENST00000492851 SMIM35A0A1B0GVV1 85 aa14.17□□□□□ -0.14
COL6A1-205ENST00000492851 POTEB3A0JP26 581 aa14.17□□□□□ -0.14
COL6A1-205ENST00000492851 ENPP3O14638 875 aa14.17□□□□□ -0.14
COL6A1-205ENST00000492851 HBP1O60381 514 aa14.17□□□□□ -0.14
COL6A1-205ENST00000492851 GHRP10912 638 aa14.17□□□□□ -0.14
COL6A1-205ENST00000492851 RPS6KB1P23443 525 aa14.17□□□□□ -0.14
COL6A1-205ENST00000492851 IGBP1P78318 339 aa14.17□□□□□ -0.14
COL6A1-205ENST00000492851 MRPS6P82932 125 aaKnown RBP14.17□□□□□ -0.14
COL6A1-205ENST00000492851 SETQ01105 290 aaPredicted RBP14.17□□□□□ -0.14
COL6A1-205ENST00000492851 TFF2Q03403 129 aa14.17□□□□□ -0.14
COL6A1-205ENST00000492851 APOBRQ0VD83 1088 aa14.17□□□□□ -0.14
COL6A1-205ENST00000492851 LPIN1Q14693 890 aa14.17□□□□□ -0.14
COL6A1-205ENST00000492851 EPC2Q52LR7 807 aa14.17□□□□□ -0.14
COL6A1-205ENST00000492851 FBXO47Q5MNV8 452 aa14.17□□□□□ -0.14
COL6A1-205ENST00000492851 ODR4Q5SWX8 454 aa14.17□□□□□ -0.14
COL6A1-205ENST00000492851 MIS18BP1Q6P0N0 1132 aa14.17□□□□□ -0.14
COL6A1-205ENST00000492851 POTEBQ6S5H4 581 aa14.17□□□□□ -0.14
COL6A1-205ENST00000492851 RUFY4Q6ZNE9 571 aa14.17□□□□□ -0.14
COL6A1-205ENST00000492851 SKAP1Q86WV1 359 aa14.17□□□□□ -0.14
COL6A1-205ENST00000492851 PLA2G4DQ86XP0 818 aa14.17□□□□□ -0.14
COL6A1-205ENST00000492851 REXO1Q8N1G1 1221 aaKnown RBP14.17□□□□□ -0.14
COL6A1-205ENST00000492851 FIBCD1Q8N539 461 aa14.17□□□□□ -0.14
COL6A1-205ENST00000492851 CCDC148Q8NFR7 591 aa14.17□□□□□ -0.14
COL6A1-205ENST00000492851 GDPD5Q8WTR4 605 aa14.17□□□□□ -0.14
COL6A1-205ENST00000492851 MRPL38Q96DV4 380 aaKnown RBP14.17□□□□□ -0.14
COL6A1-205ENST00000492851 C17orf80Q9BSJ5 609 aa14.17□□□□□ -0.14
COL6A1-205ENST00000492851 RNF26Q9BY78 433 aaPredicted RBP14.17□□□□□ -0.14
COL6A1-205ENST00000492851 AGXT2Q9BYV1 514 aa14.17□□□□□ -0.14
COL6A1-205ENST00000492851 CDY2AQ9Y6F7 541 aa14.17□□□□□ -0.14
COL6A1-205ENST00000492851 VCANP13611 3396 aa14.17□□□□□ -0.14
COL6A1-205ENST00000492851 TET1Q8NFU7 2136 aa14.17□□□□□ -0.14
COL6A1-205ENST00000492851 TRANK1O15050 2925 aa14.16□□□□□ -0.14
COL6A1-205ENST00000492851 SPTBN5Q9NRC6 3674 aaKnown RBP14.16□□□□□ -0.14
COL6A1-205ENST00000492851 H3BNC9 293 aa14.16□□□□□ -0.14
COL6A1-205ENST00000492851 IPO5O00410 1097 aaKnown RBP14.16□□□□□ -0.14
COL6A1-205ENST00000492851 BACH1O14867 736 aa14.16□□□□□ -0.14
COL6A1-205ENST00000492851 EVCP57679 992 aa14.16□□□□□ -0.14
COL6A1-205ENST00000492851 ITGB3BPQ13352 177 aaPredicted RBP14.16□□□□□ -0.14
COL6A1-205ENST00000492851 PLCB4Q15147 1175 aa14.16□□□□□ -0.14
COL6A1-205ENST00000492851 ZNF484Q5JVG2 852 aa14.16□□□□□ -0.14
COL6A1-205ENST00000492851 JAKMIP3Q5VZ66 844 aa14.16□□□□□ -0.14
COL6A1-205ENST00000492851 KRT40Q6A162 431 aa14.16□□□□□ -0.14
COL6A1-205ENST00000492851 ABHD15Q6UXT9 468 aa14.16□□□□□ -0.14
COL6A1-205ENST00000492851 TMEM192Q8IY95 271 aa14.16□□□□□ -0.14
COL6A1-205ENST00000492851 SMAP1Q8IYB5 467 aaPredicted RBP14.16□□□□□ -0.14
COL6A1-205ENST00000492851 PGBD1Q96JS3 809 aa14.16□□□□□ -0.14
COL6A1-205ENST00000492851 PCYT2Q99447 389 aa14.16□□□□□ -0.14
COL6A1-205ENST00000492851 TMEM260Q9NX78 707 aa14.16□□□□□ -0.14
COL6A1-205ENST00000492851 CHD7Q9P2D1 2997 aa14.16□□□□□ -0.14
COL6A1-205ENST00000492851 TRPV2Q9Y5S1 764 aa14.16□□□□□ -0.14
COL6A1-205ENST00000492851 NID2Q14112 1375 aa14.16□□□□□ -0.14
COL6A1-205ENST00000492851 COL1A2P08123 1366 aa14.15□□□□□ -0.14
COL6A1-205ENST00000492851 FAM86B1E9PN63 330 aa14.15□□□□□ -0.14
COL6A1-205ENST00000492851 NCK2O43639 380 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms