RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 STAG2Q8N3U4 1231 aa10.55□□□□□ -0.72
VPS8-225ENST00000492449 TMEM87BQ96K49 555 aa10.55□□□□□ -0.72
VPS8-225ENST00000492449 GBP5Q96PP8 586 aa10.55□□□□□ -0.72
VPS8-225ENST00000492449 NR1H4Q96RI1 486 aaPredicted RBP10.55□□□□□ -0.72
VPS8-225ENST00000492449 TUBGCP2Q9BSJ2 902 aa10.55□□□□□ -0.72
VPS8-225ENST00000492449 GPR108Q9NPR9 543 aa10.55□□□□□ -0.72
VPS8-225ENST00000492449 PNMA3Q9UL41 463 aa10.55□□□□□ -0.72
VPS8-225ENST00000492449 HEG1Q9ULI3 1381 aa10.55□□□□□ -0.72
VPS8-225ENST00000492449 CCDC188H7C350 402 aa10.55□□□□□ -0.72
VPS8-225ENST00000492449 FGAP02671 866 aa10.55□□□□□ -0.72
VPS8-225ENST00000492449 GM2AP17900 193 aa10.55□□□□□ -0.72
VPS8-225ENST00000492449 ZC3H6P61129 1189 aaKnown RBP10.55□□□□□ -0.72
VPS8-225ENST00000492449 MUM1Q2TAK8 710 aa10.55□□□□□ -0.72
VPS8-225ENST00000492449 FBXO31Q5XUX0 539 aaPredicted RBP10.55□□□□□ -0.72
VPS8-225ENST00000492449 FBXO41Q8TF61 875 aa10.55□□□□□ -0.72
VPS8-225ENST00000492449 DCLRE1BQ9H816 532 aa10.55□□□□□ -0.72
VPS8-225ENST00000492449 LRRC4CQ9HCJ2 640 aa10.55□□□□□ -0.72
VPS8-225ENST00000492449 LARSQ9P2J5 1176 aaKnown RBP10.55□□□□□ -0.72
VPS8-225ENST00000492449 SIPA1L3O60292 1781 aaPredicted RBP10.55□□□□□ -0.72
VPS8-225ENST00000492449 CCDC169A6NNP5 214 aa10.54□□□□□ -0.72
VPS8-225ENST00000492449 ZBTB43O43298 467 aa10.54□□□□□ -0.72
VPS8-225ENST00000492449 AFPP02771 609 aaKnown RBP10.54□□□□□ -0.72
VPS8-225ENST00000492449 RPN1P04843 607 aaKnown RBP10.54□□□□□ -0.72
VPS8-225ENST00000492449 KCNA3P22001 575 aa10.54□□□□□ -0.72
VPS8-225ENST00000492449 USP46P62068 366 aa10.54□□□□□ -0.72
VPS8-225ENST00000492449 BTG3Q14201 252 aaPredicted RBP10.54□□□□□ -0.72
VPS8-225ENST00000492449 CNGA2Q16280 664 aa10.54□□□□□ -0.72
VPS8-225ENST00000492449 TYW1BQ6NUM6 668 aa10.54□□□□□ -0.72
VPS8-225ENST00000492449 BICDL1Q6ZP65 573 aa10.54□□□□□ -0.72
VPS8-225ENST00000492449 NUDCD1Q96RS6 583 aa10.54□□□□□ -0.72
VPS8-225ENST00000492449 MTRQ99707 1265 aa10.54□□□□□ -0.72
VPS8-225ENST00000492449 EPB41L4BQ9H329 900 aa10.54□□□□□ -0.72
VPS8-225ENST00000492449 SLITRK6Q9H5Y7 841 aa10.54□□□□□ -0.72
VPS8-225ENST00000492449 NMRK1Q9NWW6 199 aa10.54□□□□□ -0.72
VPS8-225ENST00000492449 STOML1Q9UBI4 398 aa10.54□□□□□ -0.72
VPS8-225ENST00000492449 PCDH11XQ9BZA7 1347 aa10.54□□□□□ -0.72
VPS8-225ENST00000492449 EYA4O95677 639 aa10.54□□□□□ -0.72
VPS8-225ENST00000492449 RASA1P20936 1047 aa10.54□□□□□ -0.72
VPS8-225ENST00000492449 SERPINB4P48594 390 aa10.54□□□□□ -0.72
VPS8-225ENST00000492449 KLK7P49862 253 aa10.54□□□□□ -0.72
VPS8-225ENST00000492449 CBX3Q13185 183 aa10.54□□□□□ -0.72
VPS8-225ENST00000492449 NAB2Q15742 525 aa10.54□□□□□ -0.72
VPS8-225ENST00000492449 RABL6Q3YEC7 729 aaPredicted RBP10.54□□□□□ -0.72
VPS8-225ENST00000492449 USH1GQ495M9 461 aa10.54□□□□□ -0.72
VPS8-225ENST00000492449 MIIPQ5JXC2 388 aa10.54□□□□□ -0.72
VPS8-225ENST00000492449 GALNT17Q6IS24 598 aa10.54□□□□□ -0.72
VPS8-225ENST00000492449 TTI2Q6NXR4 508 aa10.54□□□□□ -0.72
VPS8-225ENST00000492449 BTNL9Q6UXG8 535 aa10.54□□□□□ -0.72
VPS8-225ENST00000492449 FAM13CQ8NE31 585 aa10.54□□□□□ -0.72
VPS8-225ENST00000492449 OSBP2Q969R2 916 aa10.54□□□□□ -0.72
VPS8-225ENST00000492449 SELENOSQ9BQE4 189 aa10.54□□□□□ -0.72
VPS8-225ENST00000492449 DDX43Q9NXZ2 648 aaKnown RBP10.54□□□□□ -0.72
VPS8-225ENST00000492449 IL1RAPL1Q9NZN1 696 aa10.54□□□□□ -0.72
VPS8-225ENST00000492449 AIPL1Q9NZN9 384 aa10.54□□□□□ -0.72
VPS8-225ENST00000492449 DDX25Q9UHL0 483 aaKnown RBP10.54□□□□□ -0.72
VPS8-225ENST00000492449 ITGB1BP2Q9UKP3 347 aa10.54□□□□□ -0.72
VPS8-225ENST00000492449 TRIM33Q9UPN9 1127 aa10.54□□□□□ -0.72
VPS8-225ENST00000492449 PHRF1Q9P1Y6 1649 aaKnown RBP10.54□□□□□ -0.72
VPS8-225ENST00000492449 SLIT3O75094 1523 aa10.54□□□□□ -0.72
VPS8-225ENST00000492449 C1orf167Q5SNV9 1468 aa10.54□□□□□ -0.72
VPS8-225ENST00000492449 TRIM75PA6NK02 468 aa10.53□□□□□ -0.72
VPS8-225ENST00000492449 ZNF189O75820 626 aaPredicted RBP10.53□□□□□ -0.72
VPS8-225ENST00000492449 ASLP04424 464 aa10.53□□□□□ -0.72
VPS8-225ENST00000492449 MKRN3Q13064 507 aaKnown RBP10.53□□□□□ -0.72
VPS8-225ENST00000492449 KBTBD12Q3ZCT8 623 aa10.53□□□□□ -0.72
VPS8-225ENST00000492449 SPDYAQ5MJ70 313 aa10.53□□□□□ -0.72
VPS8-225ENST00000492449 SMC6Q96SB8 1091 aa10.53□□□□□ -0.72
VPS8-225ENST00000492449 STMN4Q9H169 189 aaPredicted RBP10.53□□□□□ -0.72
VPS8-225ENST00000492449 SPATA7Q9P0W8 599 aa10.53□□□□□ -0.72
VPS8-225ENST00000492449 CNOT7Q9UIV1 285 aaKnown RBP10.53□□□□□ -0.72
VPS8-225ENST00000492449 ATAD5Q96QE3 1844 aa10.53□□□□□ -0.72
VPS8-225ENST00000492449 BTNL10A8MVZ5 291 aa10.53□□□□□ -0.72
VPS8-225ENST00000492449 BTBD19C9JJ37 291 aa10.53□□□□□ -0.72
VPS8-225ENST00000492449 TRAFD1O14545 582 aaPredicted RBP10.53□□□□□ -0.72
VPS8-225ENST00000492449 AKR1B10O60218 316 aa10.53□□□□□ -0.72
VPS8-225ENST00000492449 PALMO75781 387 aa10.53□□□□□ -0.72
VPS8-225ENST00000492449 RASSF7Q02833 373 aa10.53□□□□□ -0.72
VPS8-225ENST00000492449 PPARDQ03181 441 aa10.53□□□□□ -0.72
VPS8-225ENST00000492449 DHX9Q08211 1270 aaKnown RBP10.53□□□□□ -0.72
VPS8-225ENST00000492449 C6orf118Q5T5N4 469 aa10.53□□□□□ -0.72
VPS8-225ENST00000492449 CEP128Q6ZU80 1094 aa10.53□□□□□ -0.72
VPS8-225ENST00000492449 DDX42Q86XP3 938 aaKnown RBP eCLIP10.53□□□□□ -0.72
VPS8-225ENST00000492449 KLHL7Q8IXQ5 586 aa10.53□□□□□ -0.72
VPS8-225ENST00000492449 ANKLE1Q8NAG6 615 aa10.53□□□□□ -0.72
VPS8-225ENST00000492449 RSPH1Q8WYR4 309 aa10.53□□□□□ -0.72
VPS8-225ENST00000492449 ZNF653Q96CK0 615 aa10.53□□□□□ -0.72
VPS8-225ENST00000492449 EDEM3Q9BZQ6 932 aa10.53□□□□□ -0.72
VPS8-225ENST00000492449 ETNK1Q9HBU6 452 aa10.53□□□□□ -0.72
VPS8-225ENST00000492449 HSFX1Q9UBD0 423 aa10.53□□□□□ -0.72
VPS8-225ENST00000492449 TIAM2Q8IVF5 1701 aa10.53□□□□□ -0.72
VPS8-225ENST00000492449 GOLGA8AA7E2F4 631 aa10.53□□□□□ -0.72
VPS8-225ENST00000492449 ZNF213O14771 459 aa10.53□□□□□ -0.72
VPS8-225ENST00000492449 ATP9AO75110 1047 aa10.53□□□□□ -0.72
VPS8-225ENST00000492449 GNA14O95837 355 aa10.53□□□□□ -0.72
VPS8-225ENST00000492449 ZFYP08048 801 aaPredicted RBP10.53□□□□□ -0.72
VPS8-225ENST00000492449 PMS1P54277 932 aaKnown RBP10.53□□□□□ -0.72
VPS8-225ENST00000492449 HAND2P61296 217 aa10.53□□□□□ -0.72
VPS8-225ENST00000492449 RCN2Q14257 317 aa10.53□□□□□ -0.72
VPS8-225ENST00000492449 C2CD5Q86YS7 1000 aa10.53□□□□□ -0.72
VPS8-225ENST00000492449 IGDCC4Q8TDY8 1250 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms