RNA–Protein interactions for RNA: ENST00000492357.1

USP54-214, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 3

Gene USP54, Length 353 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-214ENST00000492357 FARP2O94887 1054 aaPredicted RBP10.78□□□□□ -0.68
USP54-214ENST00000492357 KIF20AO95235 890 aa10.78□□□□□ -0.68
USP54-214ENST00000492357 GH1P01241 217 aa10.78□□□□□ -0.68
USP54-214ENST00000492357 ABCD1P33897 745 aa10.78□□□□□ -0.68
USP54-214ENST00000492357 PSMC4P43686 418 aa10.78□□□□□ -0.68
USP54-214ENST00000492357 GSE1Q14687 1217 aa10.78□□□□□ -0.68
USP54-214ENST00000492357 DUSP28Q4G0W2 176 aa10.78□□□□□ -0.68
USP54-214ENST00000492357 CELF3Q5SZQ8 465 aaKnown RBP10.78□□□□□ -0.68
USP54-214ENST00000492357 FAM160B1Q5W0V3 765 aa10.78□□□□□ -0.68
USP54-214ENST00000492357 PLPPR4Q7Z2D5 763 aa10.78□□□□□ -0.68
USP54-214ENST00000492357 MLKLQ8NB16 471 aa10.78□□□□□ -0.68
USP54-214ENST00000492357 SEPT1Q8WYJ6 367 aa10.78□□□□□ -0.68
USP54-214ENST00000492357 PURBQ96QR8 312 aaKnown RBP10.78□□□□□ -0.68
USP54-214ENST00000492357 ZIC5Q96T25 663 aa10.78□□□□□ -0.68
USP54-214ENST00000492357 LXNQ9BS40 222 aa10.78□□□□□ -0.68
USP54-214ENST00000492357 TRIM9Q9C026 710 aa10.78□□□□□ -0.68
USP54-214ENST00000492357 TSPY26PQ9H489 355 aa10.78□□□□□ -0.68
USP54-214ENST00000492357 SEL1LQ9UBV2 794 aa10.78□□□□□ -0.68
USP54-214ENST00000492357 ODF2LQ9ULJ1 636 aa10.78□□□□□ -0.68
USP54-214ENST00000492357 KIAA1024Q9UPX6 916 aa10.78□□□□□ -0.68
USP54-214ENST00000492357 PCDHA5Q9Y5H7 936 aa10.78□□□□□ -0.68
USP54-214ENST00000492357 POTEB3A0JP26 581 aa10.77□□□□□ -0.69
USP54-214ENST00000492357 EML1O00423 815 aa10.77□□□□□ -0.69
USP54-214ENST00000492357 LGR5O75473 907 aa10.77□□□□□ -0.69
USP54-214ENST00000492357 RHOBTB3O94955 611 aa10.77□□□□□ -0.69
USP54-214ENST00000492357 SNAI1O95863 264 aaPredicted RBP10.77□□□□□ -0.69
USP54-214ENST00000492357 CCNE2O96020 404 aa10.77□□□□□ -0.69
USP54-214ENST00000492357 SUPT20HL2P0C7V6 817 aa10.77□□□□□ -0.69
USP54-214ENST00000492357 TXNP10599 105 aaKnown RBP10.77□□□□□ -0.69
USP54-214ENST00000492357 HOXD8P13378 290 aaPredicted RBP10.77□□□□□ -0.69
USP54-214ENST00000492357 GUCY2CP25092 1073 aa10.77□□□□□ -0.69
USP54-214ENST00000492357 CDC25AP30304 524 aa10.77□□□□□ -0.69
USP54-214ENST00000492357 NLRP12P59046 1061 aa10.77□□□□□ -0.69
USP54-214ENST00000492357 ACTR2P61160 394 aa10.77□□□□□ -0.69
USP54-214ENST00000492357 TYRO3Q06418 890 aa10.77□□□□□ -0.69
USP54-214ENST00000492357 ACVR2BQ13705 512 aa10.77□□□□□ -0.69
USP54-214ENST00000492357 CAMK4Q16566 473 aa10.77□□□□□ -0.69
USP54-214ENST00000492357 XKR3Q5GH77 459 aa10.77□□□□□ -0.69
USP54-214ENST00000492357 MFSD14CQ5VZR4 134 aa10.77□□□□□ -0.69
USP54-214ENST00000492357 TAPT1Q6NXT6 567 aa10.77□□□□□ -0.69
USP54-214ENST00000492357 POTEBQ6S5H4 581 aa10.77□□□□□ -0.69
USP54-214ENST00000492357 SEPT14Q6ZU15 432 aa10.77□□□□□ -0.69
USP54-214ENST00000492357 UNC13DQ70J99 1090 aa10.77□□□□□ -0.69
USP54-214ENST00000492357 DHX37Q8IY37 1157 aaKnown RBP10.77□□□□□ -0.69
USP54-214ENST00000492357 SLC17A8Q8NDX2 589 aa10.77□□□□□ -0.69
USP54-214ENST00000492357 SPDYE1Q8NFV5 336 aaPredicted RBP10.77□□□□□ -0.69
USP54-214ENST00000492357 PXYLP1Q8TE99 480 aa10.77□□□□□ -0.69
USP54-214ENST00000492357 BEGAINQ9BUH8 593 aa10.77□□□□□ -0.69
USP54-214ENST00000492357 R3HDMLQ9H3Y0 253 aa10.77□□□□□ -0.69
USP54-214ENST00000492357 MLXIPQ9HAP2 919 aa10.77□□□□□ -0.69
USP54-214ENST00000492357 SAMM50Q9Y512 469 aa10.77□□□□□ -0.69
USP54-214ENST00000492357 MAFBQ9Y5Q3 323 aaPredicted RBP10.77□□□□□ -0.69
USP54-214ENST00000492357 WDR81Q562E7 1941 aa10.76□□□□□ -0.69
USP54-214ENST00000492357 MCM3APO60318 1980 aa10.76□□□□□ -0.69
USP54-214ENST00000492357 FRMD3A2A2Y4 597 aa10.76□□□□□ -0.69
USP54-214ENST00000492357 GPR25O00155 361 aa10.76□□□□□ -0.69
USP54-214ENST00000492357 GAS2O43903 313 aaKnown RBP10.76□□□□□ -0.69
USP54-214ENST00000492357 FKTNO75072 461 aa10.76□□□□□ -0.69
USP54-214ENST00000492357 PPFIA4O75335 1185 aa10.76□□□□□ -0.69
USP54-214ENST00000492357 GGPS1O95749 300 aa10.76□□□□□ -0.69
USP54-214ENST00000492357 PLA2G4BP0C869 781 aa10.76□□□□□ -0.69
USP54-214ENST00000492357 PRKCSHP14314 528 aaPredicted RBP10.76□□□□□ -0.69
USP54-214ENST00000492357 GAP43P17677 238 aa10.76□□□□□ -0.69
USP54-214ENST00000492357 ERCC5P28715 1186 aaPredicted RBP10.76□□□□□ -0.69
USP54-214ENST00000492357 SLC12A3P55017 1021 aa10.76□□□□□ -0.69
USP54-214ENST00000492357 NKX3-2P78367 333 aa10.76□□□□□ -0.69
USP54-214ENST00000492357 GRM1Q13255 1194 aa10.76□□□□□ -0.69
USP54-214ENST00000492357 MORC3Q14149 939 aa10.76□□□□□ -0.69
USP54-214ENST00000492357 UVSSAQ2YD98 709 aa10.76□□□□□ -0.69
USP54-214ENST00000492357 BRDTQ58F21 947 aaPredicted RBP10.76□□□□□ -0.69
USP54-214ENST00000492357 CCDC65Q8IXS2 484 aa10.76□□□□□ -0.69
USP54-214ENST00000492357 PPTC7Q8NI37 304 aa10.76□□□□□ -0.69
USP54-214ENST00000492357 NPLOC4Q8TAT6 608 aa10.76□□□□□ -0.69
USP54-214ENST00000492357 FAM200AQ8TCP9 573 aa10.76□□□□□ -0.69
USP54-214ENST00000492357 KCNN1Q92952 543 aa10.76□□□□□ -0.69
USP54-214ENST00000492357 DYDC2Q96IM9 177 aa10.76□□□□□ -0.69
USP54-214ENST00000492357 TRIM47Q96LD4 638 aa10.76□□□□□ -0.69
USP54-214ENST00000492357 JPH2Q9BR39 696 aaPredicted RBP10.76□□□□□ -0.69
USP54-214ENST00000492357 PANK2Q9BZ23 570 aa10.76□□□□□ -0.69
USP54-214ENST00000492357 AZI2Q9H6S1 392 aa10.76□□□□□ -0.69
USP54-214ENST00000492357 C17orf75Q9HAS0 396 aa10.76□□□□□ -0.69
USP54-214ENST00000492357 SRRDQ9UH36 339 aa10.76□□□□□ -0.69
USP54-214ENST00000492357 FSD2A1L4K1 749 aa10.75□□□□□ -0.69
USP54-214ENST00000492357 POTEFA5A3E0 1075 aa10.75□□□□□ -0.69
USP54-214ENST00000492357 NOP56O00567 594 aaKnown RBP10.75□□□□□ -0.69
USP54-214ENST00000492357 CHMP2AO43633 222 aa10.75□□□□□ -0.69
USP54-214ENST00000492357 KPNA6O60684 536 aa10.75□□□□□ -0.69
USP54-214ENST00000492357 TRPA1O75762 1119 aa10.75□□□□□ -0.69
USP54-214ENST00000492357 RPN1P04843 607 aaKnown RBP10.75□□□□□ -0.69
USP54-214ENST00000492357 MAPTP10636 758 aaKnown RBP10.75□□□□□ -0.69
USP54-214ENST00000492357 RTP1P59025 263 aa10.75□□□□□ -0.69
USP54-214ENST00000492357 SP2Q02086 613 aa10.75□□□□□ -0.69
USP54-214ENST00000492357 PNOCQ13519 176 aa10.75□□□□□ -0.69
USP54-214ENST00000492357 STIM1Q13586 685 aa10.75□□□□□ -0.69
USP54-214ENST00000492357 ZNF658Q5TYW1 1059 aaPredicted RBP10.75□□□□□ -0.69
USP54-214ENST00000492357 POTEGQ6S5H5 508 aa10.75□□□□□ -0.69
USP54-214ENST00000492357 CYFIP1Q7L576 1253 aa10.75□□□□□ -0.69
USP54-214ENST00000492357 TPH2Q8IWU9 490 aa10.75□□□□□ -0.69
USP54-214ENST00000492357 FBXO16Q8IX29 292 aaPredicted RBP10.75□□□□□ -0.69
USP54-214ENST00000492357 CKAP2LQ8IYA6 745 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms