RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 MARK3P27448 753 aa12.59□□□□□ -0.39
TMEM39A-211ENST00000491685 TCF7P36402 384 aaPredicted RBP12.59□□□□□ -0.39
TMEM39A-211ENST00000491685 AK2P54819 239 aa12.59□□□□□ -0.39
TMEM39A-211ENST00000491685 ARHGAP4P98171 946 aa12.59□□□□□ -0.39
TMEM39A-211ENST00000491685 TOB2Q14106 344 aaPredicted RBP12.59□□□□□ -0.39
TMEM39A-211ENST00000491685 HEATR3Q7Z4Q2 680 aa12.59□□□□□ -0.39
TMEM39A-211ENST00000491685 TRIM22Q8IYM9 498 aa12.59□□□□□ -0.39
TMEM39A-211ENST00000491685 MYOCDQ8IZQ8 938 aa12.59□□□□□ -0.39
TMEM39A-211ENST00000491685 GPRASP2Q96D09 838 aa12.59□□□□□ -0.39
TMEM39A-211ENST00000491685 ZBTB10Q96DT7 871 aa12.59□□□□□ -0.39
TMEM39A-211ENST00000491685 RAD9AQ99638 391 aa12.59□□□□□ -0.39
TMEM39A-211ENST00000491685 SENP7Q9BQF6 1050 aa12.59□□□□□ -0.39
TMEM39A-211ENST00000491685 C17orf80Q9BSJ5 609 aa12.59□□□□□ -0.39
TMEM39A-211ENST00000491685 PSTPIP2Q9H939 334 aa12.59□□□□□ -0.39
TMEM39A-211ENST00000491685 PCDHA6Q9UN73 950 aa12.59□□□□□ -0.39
TMEM39A-211ENST00000491685 PCDHA8Q9Y5H6 950 aa12.59□□□□□ -0.39
TMEM39A-211ENST00000491685 UBIAD1Q9Y5Z9 338 aa12.59□□□□□ -0.39
TMEM39A-211ENST00000491685 PIEZO1Q92508 2521 aa12.58□□□□□ -0.4
TMEM39A-211ENST00000491685 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.58□□□□□ -0.4
TMEM39A-211ENST00000491685 ERVK-21P61565 698 aa12.58□□□□□ -0.4
TMEM39A-211ENST00000491685 CCT2P78371 535 aaKnown RBP12.58□□□□□ -0.4
TMEM39A-211ENST00000491685 FUT2Q10981 343 aa12.58□□□□□ -0.4
TMEM39A-211ENST00000491685 TMEM31Q5JXX7 168 aa12.58□□□□□ -0.4
TMEM39A-211ENST00000491685 XRRA1Q6P2D8 792 aa12.58□□□□□ -0.4
TMEM39A-211ENST00000491685 NLRX1Q86UT6 975 aa12.58□□□□□ -0.4
TMEM39A-211ENST00000491685 CYP2W1Q8TAV3 490 aa12.58□□□□□ -0.4
TMEM39A-211ENST00000491685 EPHX3Q9H6B9 360 aa12.58□□□□□ -0.4
TMEM39A-211ENST00000491685 SH2B1Q9NRF2 756 aaPredicted RBP12.58□□□□□ -0.4
TMEM39A-211ENST00000491685 ZNF215Q9UL58 517 aaPredicted RBP12.58□□□□□ -0.4
TMEM39A-211ENST00000491685 ADAMTS3O15072 1205 aa12.57□□□□□ -0.4
TMEM39A-211ENST00000491685 EFCAB14O75071 495 aa12.57□□□□□ -0.4
TMEM39A-211ENST00000491685 CHRNA1P02708 482 aa12.57□□□□□ -0.4
TMEM39A-211ENST00000491685 AMHP03971 560 aa12.57□□□□□ -0.4
TMEM39A-211ENST00000491685 ADD1P35611 737 aaKnown RBP12.57□□□□□ -0.4
TMEM39A-211ENST00000491685 HTRA4P83105 476 aaPredicted RBP12.57□□□□□ -0.4
TMEM39A-211ENST00000491685 SSRP1Q08945 709 aaKnown RBP12.57□□□□□ -0.4
TMEM39A-211ENST00000491685 MGAT3Q09327 533 aa12.57□□□□□ -0.4
TMEM39A-211ENST00000491685 STK3Q13188 491 aa12.57□□□□□ -0.4
TMEM39A-211ENST00000491685 MTMR1Q13613 665 aa12.57□□□□□ -0.4
TMEM39A-211ENST00000491685 SP7Q8TDD2 431 aaPredicted RBP12.57□□□□□ -0.4
TMEM39A-211ENST00000491685 TGS1Q96RS0 853 aaKnown RBP12.57□□□□□ -0.4
TMEM39A-211ENST00000491685 PCYT2Q99447 389 aa12.57□□□□□ -0.4
TMEM39A-211ENST00000491685 LARP6Q9BRS8 491 aaKnown RBP12.57□□□□□ -0.4
TMEM39A-211ENST00000491685 JADE2Q9NQC1 790 aa12.57□□□□□ -0.4
TMEM39A-211ENST00000491685 TMEM260Q9NX78 707 aa12.57□□□□□ -0.4
TMEM39A-211ENST00000491685 COG5Q9UP83 839 aa12.57□□□□□ -0.4
TMEM39A-211ENST00000491685 V9GY48 417 aaPredicted RBP12.57□□□□□ -0.4
TMEM39A-211ENST00000491685 MUC6Q6W4X9 2439 aa12.57□□□□□ -0.4
TMEM39A-211ENST00000491685 SPDYE3A6NKU9 549 aa12.56□□□□□ -0.4
TMEM39A-211ENST00000491685 STXBP3O00186 592 aa12.56□□□□□ -0.4
TMEM39A-211ENST00000491685 PRPF3O43395 683 aaKnown RBP12.56□□□□□ -0.4
TMEM39A-211ENST00000491685 PFKFB2O60825 505 aa12.56□□□□□ -0.4
TMEM39A-211ENST00000491685 GPR37L1O60883 481 aa12.56□□□□□ -0.4
TMEM39A-211ENST00000491685 CAND2O75155 1236 aa12.56□□□□□ -0.4
TMEM39A-211ENST00000491685 UPP2O95045 317 aa12.56□□□□□ -0.4
TMEM39A-211ENST00000491685 GHRP10912 638 aa12.56□□□□□ -0.4
TMEM39A-211ENST00000491685 XBP1P17861 261 aa12.56□□□□□ -0.4
TMEM39A-211ENST00000491685 CDC27P30260 824 aa12.56□□□□□ -0.4
TMEM39A-211ENST00000491685 PPFIA1Q13136 1202 aa12.56□□□□□ -0.4
TMEM39A-211ENST00000491685 GRIK4Q16099 956 aa12.56□□□□□ -0.4
TMEM39A-211ENST00000491685 FAM26DQ5JW98 314 aa12.56□□□□□ -0.4
TMEM39A-211ENST00000491685 MARCH8Q5T0T0 291 aa12.56□□□□□ -0.4
TMEM39A-211ENST00000491685 WASF1Q92558 559 aa12.56□□□□□ -0.4
TMEM39A-211ENST00000491685 SEPT8Q92599 483 aa12.56□□□□□ -0.4
TMEM39A-211ENST00000491685 KIF2CQ99661 725 aa12.56□□□□□ -0.4
TMEM39A-211ENST00000491685 FAM217BQ9NTX9 383 aaPredicted RBP12.56□□□□□ -0.4
TMEM39A-211ENST00000491685 TPCN1Q9ULQ1 816 aa12.56□□□□□ -0.4
TMEM39A-211ENST00000491685 hCG_1984214I3L0E3 225 aa12.55□□□□□ -0.4
TMEM39A-211ENST00000491685 ARP10275 920 aa12.55□□□□□ -0.4
TMEM39A-211ENST00000491685 IFNAR1P17181 557 aa12.55□□□□□ -0.4
TMEM39A-211ENST00000491685 NAPAP54920 295 aa12.55□□□□□ -0.4
TMEM39A-211ENST00000491685 ITGB3BPQ13352 177 aaPredicted RBP12.55□□□□□ -0.4
TMEM39A-211ENST00000491685 TEX2Q8IWB9 1127 aa12.55□□□□□ -0.4
TMEM39A-211ENST00000491685 ZNF713Q8N859 430 aaPredicted RBP12.55□□□□□ -0.4
TMEM39A-211ENST00000491685 GIMAP8Q8ND71 665 aaPredicted RBP12.55□□□□□ -0.4
TMEM39A-211ENST00000491685 CCDC12Q8WUD4 166 aaPredicted RBP12.55□□□□□ -0.4
TMEM39A-211ENST00000491685 SEPT1Q8WYJ6 367 aa12.55□□□□□ -0.4
TMEM39A-211ENST00000491685 TOP1MTQ969P6 601 aa12.55□□□□□ -0.4
TMEM39A-211ENST00000491685 IFIH1Q9BYX4 1025 aaKnown RBP12.55□□□□□ -0.4
TMEM39A-211ENST00000491685 GLT8D2Q9H1C3 349 aa12.55□□□□□ -0.4
TMEM39A-211ENST00000491685 C11orf16Q9NQ32 467 aa12.55□□□□□ -0.4
TMEM39A-211ENST00000491685 TUBE1Q9UJT0 475 aa12.55□□□□□ -0.4
TMEM39A-211ENST00000491685 INSL6Q9Y581 213 aa12.55□□□□□ -0.4
TMEM39A-211ENST00000491685 EVPLQ92817 2033 aa12.55□□□□□ -0.4
TMEM39A-211ENST00000491685 NRCAMQ92823 1304 aa12.55□□□□□ -0.4
TMEM39A-211ENST00000491685 TTC3P53804 2025 aa12.54□□□□□ -0.4
TMEM39A-211ENST00000491685 MBLAC1A4D2B0 266 aaPredicted RBP12.54□□□□□ -0.4
TMEM39A-211ENST00000491685 GNAT1P11488 350 aa12.54□□□□□ -0.4
TMEM39A-211ENST00000491685 IGBP1P78318 339 aa12.54□□□□□ -0.4
TMEM39A-211ENST00000491685 LPIN1Q14693 890 aa12.54□□□□□ -0.4
TMEM39A-211ENST00000491685 FBXO22Q8NEZ5 403 aa12.54□□□□□ -0.4
TMEM39A-211ENST00000491685 TRAPPC12Q8WVT3 735 aa12.54□□□□□ -0.4
TMEM39A-211ENST00000491685 DNAJB3Q8WWF6 145 aa12.54□□□□□ -0.4
TMEM39A-211ENST00000491685 LINC01599Q8WXQ3 324 aa12.54□□□□□ -0.4
TMEM39A-211ENST00000491685 HLA-CQ95604 372 aa12.54□□□□□ -0.4
TMEM39A-211ENST00000491685 CDHR1Q96JP9 859 aa12.54□□□□□ -0.4
TMEM39A-211ENST00000491685 MXRA8Q9BRK3 442 aa12.54□□□□□ -0.4
TMEM39A-211ENST00000491685 RNF26Q9BY78 433 aaPredicted RBP12.54□□□□□ -0.4
TMEM39A-211ENST00000491685 ANO3Q9BYT9 981 aa12.54□□□□□ -0.4
TMEM39A-211ENST00000491685 EHMT1Q9H9B1 1298 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms