RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 PLAGL2Q9UPG8 496 aa12.92□□□□□ -0.34
CLCNKA-206ENST00000491433 TTC3P53804 2025 aa12.91□□□□□ -0.34
CLCNKA-206ENST00000491433 ASH1LQ9NR48 2969 aaKnown RBP12.91□□□□□ -0.34
CLCNKA-206ENST00000491433 ZNF213O14771 459 aa12.91□□□□□ -0.34
CLCNKA-206ENST00000491433 ADRB1P08588 477 aa12.91□□□□□ -0.34
CLCNKA-206ENST00000491433 LINC00271P0C7V0 271 aa12.91□□□□□ -0.34
CLCNKA-206ENST00000491433 RRP1P56182 461 aaKnown RBP12.91□□□□□ -0.34
CLCNKA-206ENST00000491433 SP2Q02086 613 aa12.91□□□□□ -0.34
CLCNKA-206ENST00000491433 METTL7BQ6UX53 244 aa12.91□□□□□ -0.34
CLCNKA-206ENST00000491433 FAM43BQ6ZT52 329 aaPredicted RBP12.91□□□□□ -0.34
CLCNKA-206ENST00000491433 CMTR2Q8IYT2 770 aaKnown RBP12.91□□□□□ -0.34
CLCNKA-206ENST00000491433 ZSCAN10Q96SZ4 725 aaPredicted RBP12.91□□□□□ -0.34
CLCNKA-206ENST00000491433 ZKSCAN3Q9BRR0 538 aa12.91□□□□□ -0.34
CLCNKA-206ENST00000491433 FTHL17Q9BXU8 183 aa12.91□□□□□ -0.34
CLCNKA-206ENST00000491433 RC3H2Q9HBD1 1191 aaKnown RBP12.91□□□□□ -0.34
CLCNKA-206ENST00000491433 SETD4Q9NVD3 440 aa12.91□□□□□ -0.34
CLCNKA-206ENST00000491433 PCDHGC5Q9Y5F6 944 aa12.91□□□□□ -0.34
CLCNKA-206ENST00000491433 PCDHA1Q9Y5I3 950 aa12.91□□□□□ -0.34
CLCNKA-206ENST00000491433 GCOM1H8Y6P7 765 aaPredicted RBP12.9□□□□□ -0.34
CLCNKA-206ENST00000491433 ENPP3O14638 875 aa12.9□□□□□ -0.34
CLCNKA-206ENST00000491433 ZBTB5O15062 677 aa12.9□□□□□ -0.34
CLCNKA-206ENST00000491433 LINC01565O15544 149 aa12.9□□□□□ -0.34
CLCNKA-206ENST00000491433 SORBS3O60504 671 aa12.9□□□□□ -0.34
CLCNKA-206ENST00000491433 DGKIO75912 1065 aa12.9□□□□□ -0.34
CLCNKA-206ENST00000491433 POLR2MP0CAP2 368 aa12.9□□□□□ -0.34
CLCNKA-206ENST00000491433 STAG3L1P0CL83 205 aa12.9□□□□□ -0.34
CLCNKA-206ENST00000491433 SRGAP2BP0DMP2 458 aa12.9□□□□□ -0.34
CLCNKA-206ENST00000491433 ATF7P17544 494 aaPredicted RBP12.9□□□□□ -0.34
CLCNKA-206ENST00000491433 ARHGAP4P98171 946 aa12.9□□□□□ -0.34
CLCNKA-206ENST00000491433 ERICH6BQ5W0A0 696 aa12.9□□□□□ -0.34
CLCNKA-206ENST00000491433 ZBTB33Q86T24 672 aa12.9□□□□□ -0.34
CLCNKA-206ENST00000491433 GIMAP8Q8ND71 665 aaPredicted RBP12.9□□□□□ -0.34
CLCNKA-206ENST00000491433 EHMT1Q9H9B1 1298 aa12.9□□□□□ -0.34
CLCNKA-206ENST00000491433 RNF216Q9NWF9 866 aaPredicted RBP12.9□□□□□ -0.34
CLCNKA-206ENST00000491433 SQORQ9Y6N5 450 aa12.9□□□□□ -0.34
CLCNKA-206ENST00000491433 A0A0D9SFI3 127 aa12.89□□□□□ -0.35
CLCNKA-206ENST00000491433 FIBPO43427 364 aa12.89□□□□□ -0.35
CLCNKA-206ENST00000491433 GHRP10912 638 aa12.89□□□□□ -0.35
CLCNKA-206ENST00000491433 GTF2F1P35269 517 aaKnown RBP eCLIP12.89□□□□□ -0.35
CLCNKA-206ENST00000491433 ADAM17P78536 824 aa12.89□□□□□ -0.35
CLCNKA-206ENST00000491433 ASTLQ6HA08 431 aaPredicted RBP12.89□□□□□ -0.35
CLCNKA-206ENST00000491433 TBC1D10CQ8IV04 446 aa12.89□□□□□ -0.35
CLCNKA-206ENST00000491433 OTUD7AQ8TE49 926 aaPredicted RBP12.89□□□□□ -0.35
CLCNKA-206ENST00000491433 LMBR1Q8WVP7 490 aa12.89□□□□□ -0.35
CLCNKA-206ENST00000491433 RUBCNQ92622 972 aa12.89□□□□□ -0.35
CLCNKA-206ENST00000491433 FAM227BQ96M60 508 aa12.89□□□□□ -0.35
CLCNKA-206ENST00000491433 CDCA3Q99618 268 aaPredicted RBP12.89□□□□□ -0.35
CLCNKA-206ENST00000491433 LAMA4Q16363 1823 aa12.89□□□□□ -0.35
CLCNKA-206ENST00000491433 NEDD4P46934 1319 aa12.88□□□□□ -0.35
CLCNKA-206ENST00000491433 OPLAHO14841 1288 aa12.88□□□□□ -0.35
CLCNKA-206ENST00000491433 CHRNA1P02708 482 aa12.88□□□□□ -0.35
CLCNKA-206ENST00000491433 ITGB1P05556 798 aa12.88□□□□□ -0.35
CLCNKA-206ENST00000491433 HOXA13P31271 388 aaPredicted RBP12.88□□□□□ -0.35
CLCNKA-206ENST00000491433 NRIP1P48552 1158 aa12.88□□□□□ -0.35
CLCNKA-206ENST00000491433 UBE3AQ05086 875 aa12.88□□□□□ -0.35
CLCNKA-206ENST00000491433 COL9A3Q14050 684 aaPredicted RBP12.88□□□□□ -0.35
CLCNKA-206ENST00000491433 C20orf194Q5TEA3 1177 aa12.88□□□□□ -0.35
CLCNKA-206ENST00000491433 PDE12Q6L8Q7 609 aaKnown RBP12.88□□□□□ -0.35
CLCNKA-206ENST00000491433 TSHZ1Q6ZSZ6 1077 aa12.88□□□□□ -0.35
CLCNKA-206ENST00000491433 CYFIP1Q7L576 1253 aa12.88□□□□□ -0.35
CLCNKA-206ENST00000491433 NPAS4Q8IUM7 802 aa12.88□□□□□ -0.35
CLCNKA-206ENST00000491433 CYP2W1Q8TAV3 490 aa12.88□□□□□ -0.35
CLCNKA-206ENST00000491433 SPPL3Q8TCT6 385 aa12.88□□□□□ -0.35
CLCNKA-206ENST00000491433 POF1BQ8WVV4 589 aa12.88□□□□□ -0.35
CLCNKA-206ENST00000491433 TNPO1Q92973 898 aaKnown RBP12.88□□□□□ -0.35
CLCNKA-206ENST00000491433 MTMR8Q96EF0 704 aa12.88□□□□□ -0.35
CLCNKA-206ENST00000491433 INPP4AQ96PE3 977 aaPredicted RBP12.88□□□□□ -0.35
CLCNKA-206ENST00000491433 GPR20Q99678 358 aa12.88□□□□□ -0.35
CLCNKA-206ENST00000491433 SENP7Q9BQF6 1050 aa12.88□□□□□ -0.35
CLCNKA-206ENST00000491433 UBAC1Q9BSL1 405 aa12.88□□□□□ -0.35
CLCNKA-206ENST00000491433 OSBPL7Q9BZF2 842 aa12.88□□□□□ -0.35
CLCNKA-206ENST00000491433 KRT23Q9C075 422 aa12.88□□□□□ -0.35
CLCNKA-206ENST00000491433 CNNM2Q9H8M5 875 aa12.88□□□□□ -0.35
CLCNKA-206ENST00000491433 AAASQ9NRG9 546 aa12.88□□□□□ -0.35
CLCNKA-206ENST00000491433 CLEC1BQ9P126 229 aa12.88□□□□□ -0.35
CLCNKA-206ENST00000491433 USP15Q9Y4E8 981 aaPredicted RBP12.88□□□□□ -0.35
CLCNKA-206ENST00000491433 FRYLO94915 3013 aa12.88□□□□□ -0.35
CLCNKA-206ENST00000491433 KIAA1671Q9BY89 1806 aa12.88□□□□□ -0.35
CLCNKA-206ENST00000491433 SALL3Q9BXA9 1300 aa12.88□□□□□ -0.35
CLCNKA-206ENST00000491433 SPATA31C2B4DYI2 1134 aa12.87□□□□□ -0.35
CLCNKA-206ENST00000491433 KLRF2D3W0D1 207 aa12.87□□□□□ -0.35
CLCNKA-206ENST00000491433 M0QZ92 97 aa12.87□□□□□ -0.35
CLCNKA-206ENST00000491433 CSPG5O95196 566 aa12.87□□□□□ -0.35
CLCNKA-206ENST00000491433 ATXN1P54253 815 aaKnown RBP12.87□□□□□ -0.35
CLCNKA-206ENST00000491433 MGAT3Q09327 533 aa12.87□□□□□ -0.35
CLCNKA-206ENST00000491433 NMIQ13287 307 aaPredicted RBP12.87□□□□□ -0.35
CLCNKA-206ENST00000491433 CAMK1Q14012 370 aa12.87□□□□□ -0.35
CLCNKA-206ENST00000491433 LPIN1Q14693 890 aa12.87□□□□□ -0.35
CLCNKA-206ENST00000491433 FBXO47Q5MNV8 452 aa12.87□□□□□ -0.35
CLCNKA-206ENST00000491433 IFIT1BQ5T764 474 aaKnown RBP12.87□□□□□ -0.35
CLCNKA-206ENST00000491433 UTP14CQ5TAP6 766 aaKnown RBP12.87□□□□□ -0.35
CLCNKA-206ENST00000491433 IER5Q5VY09 327 aa12.87□□□□□ -0.35
CLCNKA-206ENST00000491433 XRRA1Q6P2D8 792 aa12.87□□□□□ -0.35
CLCNKA-206ENST00000491433 FCHSD1Q86WN1 690 aa12.87□□□□□ -0.35
CLCNKA-206ENST00000491433 ENAHQ8N8S7 591 aaPredicted RBP12.87□□□□□ -0.35
CLCNKA-206ENST00000491433 KLHL23Q8NBE8 558 aa12.87□□□□□ -0.35
CLCNKA-206ENST00000491433 RPGRIP1Q96KN7 1286 aa12.87□□□□□ -0.35
CLCNKA-206ENST00000491433 NEK1Q96PY6 1258 aa12.87□□□□□ -0.35
CLCNKA-206ENST00000491433 TLE6Q9H808 572 aa12.87□□□□□ -0.35
CLCNKA-206ENST00000491433 GTF3C3Q9Y5Q9 886 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms