RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 NT5C3AQ9H0P0 336 aa24.37■■□□□ 1.49
VCPKMT-204ENST00000491402 TUFT1Q9NNX1 390 aa24.37■■□□□ 1.49
VCPKMT-204ENST00000491402 SLITRK3O94933 977 aa24.37■■□□□ 1.49
VCPKMT-204ENST00000491402 STAT6P42226 847 aa24.37■■□□□ 1.49
VCPKMT-204ENST00000491402 LONRF3Q496Y0 759 aa24.37■■□□□ 1.49
VCPKMT-204ENST00000491402 TMEM119Q4V9L6 283 aa24.37■■□□□ 1.49
VCPKMT-204ENST00000491402 IQUBQ8NA54 791 aa24.37■■□□□ 1.49
VCPKMT-204ENST00000491402 EMID1Q96A84 441 aaPredicted RBP24.37■■□□□ 1.49
VCPKMT-204ENST00000491402 SPATA33Q96N06 139 aa24.37■■□□□ 1.49
VCPKMT-204ENST00000491402 DDX19AQ9NUU7 478 aaKnown RBP24.37■■□□□ 1.49
VCPKMT-204ENST00000491402 POTEFA5A3E0 1075 aa24.36■■□□□ 1.49
VCPKMT-204ENST00000491402 ATG7O95352 703 aa24.36■■□□□ 1.49
VCPKMT-204ENST00000491402 CCL5P13501 91 aa24.36■■□□□ 1.49
VCPKMT-204ENST00000491402 LAMC2Q13753 1193 aa24.36■■□□□ 1.49
VCPKMT-204ENST00000491402 CTTNQ14247 550 aaKnown RBP24.36■■□□□ 1.49
VCPKMT-204ENST00000491402 NAALADL2Q58DX5 795 aa24.36■■□□□ 1.49
VCPKMT-204ENST00000491402 POTEGQ6S5H5 508 aa24.36■■□□□ 1.49
VCPKMT-204ENST00000491402 ABHD15Q6UXT9 468 aa24.36■■□□□ 1.49
VCPKMT-204ENST00000491402 BANK1Q8NDB2 785 aa24.36■■□□□ 1.49
VCPKMT-204ENST00000491402 LRRC15Q8TF66 581 aa24.36■■□□□ 1.49
VCPKMT-204ENST00000491402 LXNQ9BS40 222 aa24.36■■□□□ 1.49
VCPKMT-204ENST00000491402 FAM184BQ9ULE4 1060 aa24.36■■□□□ 1.49
VCPKMT-204ENST00000491402 KIAA1024Q9UPX6 916 aa24.36■■□□□ 1.49
VCPKMT-204ENST00000491402 GNEQ9Y223 722 aaKnown RBP24.36■■□□□ 1.49
VCPKMT-204ENST00000491402 NOP56O00567 594 aaKnown RBP24.35■■□□□ 1.49
VCPKMT-204ENST00000491402 ACTN4O43707 911 aaKnown RBP24.35■■□□□ 1.49
VCPKMT-204ENST00000491402 P4HBP07237 508 aaKnown RBP24.35■■□□□ 1.49
VCPKMT-204ENST00000491402 PSAPP07602 524 aa24.35■■□□□ 1.49
VCPKMT-204ENST00000491402 AKR1A1P14550 325 aa24.35■■□□□ 1.49
VCPKMT-204ENST00000491402 CAVIN1Q6NZI2 390 aaKnown RBP24.35■■□□□ 1.49
VCPKMT-204ENST00000491402 MIS18BP1Q6P0N0 1132 aa24.35■■□□□ 1.49
VCPKMT-204ENST00000491402 TIGD1Q96MW7 591 aa24.35■■□□□ 1.49
VCPKMT-204ENST00000491402 GPR20Q99678 358 aa24.35■■□□□ 1.49
VCPKMT-204ENST00000491402 RNF208Q9H0X6 261 aa24.35■■□□□ 1.49
VCPKMT-204ENST00000491402 SUPT20HL2P0C7V6 817 aa24.34■■□□□ 1.49
VCPKMT-204ENST00000491402 KRBA2Q6ZNG9 492 aa24.34■■□□□ 1.49
VCPKMT-204ENST00000491402 TPH2Q8IWU9 490 aa24.34■■□□□ 1.49
VCPKMT-204ENST00000491402 CNNM3Q8NE01 707 aa24.34■■□□□ 1.49
VCPKMT-204ENST00000491402 SEPT1Q8WYJ6 367 aa24.34■■□□□ 1.49
VCPKMT-204ENST00000491402 TMEM63CQ9P1W3 806 aa24.34■■□□□ 1.49
VCPKMT-204ENST00000491402 WRAP73Q9P2S5 460 aaPredicted RBP24.34■■□□□ 1.49
VCPKMT-204ENST00000491402 USP25Q9UHP3 1055 aa24.34■■□□□ 1.49
VCPKMT-204ENST00000491402 SERTAD1Q9UHV2 236 aa24.34■■□□□ 1.49
VCPKMT-204ENST00000491402 GSTTP1A0A1W2PQM5 241 aa24.34■■□□□ 1.49
VCPKMT-204ENST00000491402 SEPT4O43236 478 aa24.34■■□□□ 1.49
VCPKMT-204ENST00000491402 SLFN14P0C7P3 912 aa24.34■■□□□ 1.49
VCPKMT-204ENST00000491402 MUTP22033 750 aa24.34■■□□□ 1.49
VCPKMT-204ENST00000491402 TCF7P36402 384 aaPredicted RBP24.34■■□□□ 1.49
VCPKMT-204ENST00000491402 QARSP47897 775 aaKnown RBP24.34■■□□□ 1.49
VCPKMT-204ENST00000491402 KCNK18Q7Z418 384 aa24.34■■□□□ 1.49
VCPKMT-204ENST00000491402 CCDC60Q8IWA6 550 aaPredicted RBP24.34■■□□□ 1.49
VCPKMT-204ENST00000491402 LENG1Q96BZ8 264 aaPredicted RBP24.34■■□□□ 1.49
VCPKMT-204ENST00000491402 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.34■■□□□ 1.49
VCPKMT-204ENST00000491402 LOXHD1Q8IVV2 1947 aa24.33■■□□□ 1.49
VCPKMT-204ENST00000491402 UGCGQ16739 394 aa24.33■■□□□ 1.49
VCPKMT-204ENST00000491402 PDXDC2PQ6P474 469 aa24.33■■□□□ 1.49
VCPKMT-204ENST00000491402 CEP57L1Q8IYX8 460 aa24.33■■□□□ 1.49
VCPKMT-204ENST00000491402 OR6J1Q8NGC5 347 aa24.33■■□□□ 1.49
VCPKMT-204ENST00000491402 PPTC7Q8NI37 304 aa24.33■■□□□ 1.49
VCPKMT-204ENST00000491402 BLOC1S4Q9NUP1 217 aa24.33■■□□□ 1.49
VCPKMT-204ENST00000491402 STK17AQ9UEE5 414 aa24.33■■□□□ 1.49
VCPKMT-204ENST00000491402 IGKV6D-21A0A0A0MT36 114 aa24.32■■□□□ 1.48
VCPKMT-204ENST00000491402 SWSAP1Q6NVH7 229 aa24.32■■□□□ 1.48
VCPKMT-204ENST00000491402 TLK2Q86UE8 772 aa24.32■■□□□ 1.48
VCPKMT-204ENST00000491402 NUP62CLQ9H1M0 184 aa24.32■■□□□ 1.48
VCPKMT-204ENST00000491402 CUEDC2Q9H467 287 aa24.32■■□□□ 1.48
VCPKMT-204ENST00000491402 ZSWIM4Q9H7M6 989 aa24.32■■□□□ 1.48
VCPKMT-204ENST00000491402 GABBR1Q9UBS5 961 aa24.32■■□□□ 1.48
VCPKMT-204ENST00000491402 PSMC5P62195 406 aa24.31■■□□□ 1.48
VCPKMT-204ENST00000491402 KCTD17Q8N5Z5 321 aa24.31■■□□□ 1.48
VCPKMT-204ENST00000491402 AFG1LQ8WV93 481 aa24.31■■□□□ 1.48
VCPKMT-204ENST00000491402 ATP6V0A1Q93050 837 aa24.31■■□□□ 1.48
VCPKMT-204ENST00000491402 SYAP1Q96A49 352 aaPredicted RBP24.31■■□□□ 1.48
VCPKMT-204ENST00000491402 CLSTN2Q9H4D0 955 aa24.31■■□□□ 1.48
VCPKMT-204ENST00000491402 PAK6Q9NQU5 681 aaPredicted RBP24.31■■□□□ 1.48
VCPKMT-204ENST00000491402 BRCA2P51587 3418 aa24.31■■□□□ 1.48
VCPKMT-204ENST00000491402 IGSF9BQ9UPX0 1349 aa24.31■■□□□ 1.48
VCPKMT-204ENST00000491402 BACH1O14867 736 aa24.31■■□□□ 1.48
VCPKMT-204ENST00000491402 PSMC6P62333 389 aa24.31■■□□□ 1.48
VCPKMT-204ENST00000491402 CAMK4Q16566 473 aa24.31■■□□□ 1.48
VCPKMT-204ENST00000491402 CCDC183Q5T5S1 534 aa24.31■■□□□ 1.48
VCPKMT-204ENST00000491402 LARP4BQ92615 738 aaKnown RBP24.31■■□□□ 1.48
VCPKMT-204ENST00000491402 DEFB118Q96PH6 123 aa24.31■■□□□ 1.48
VCPKMT-204ENST00000491402 DDX20Q9UHI6 824 aaKnown RBP24.31■■□□□ 1.48
VCPKMT-204ENST00000491402 E9PMD0 336 aa24.3■■□□□ 1.48
VCPKMT-204ENST00000491402 DYNC1LI2O43237 492 aaPredicted RBP24.3■■□□□ 1.48
VCPKMT-204ENST00000491402 C4orf19Q8IY42 314 aa24.3■■□□□ 1.48
VCPKMT-204ENST00000491402 TNS4Q8IZW8 715 aa24.3■■□□□ 1.48
VCPKMT-204ENST00000491402 RAD54LQ92698 747 aa24.3■■□□□ 1.48
VCPKMT-204ENST00000491402 PCYT2Q99447 389 aa24.3■■□□□ 1.48
VCPKMT-204ENST00000491402 ZNF302Q9NR11 478 aa24.3■■□□□ 1.48
VCPKMT-204ENST00000491402 DNM3Q9UQ16 869 aa24.3■■□□□ 1.48
VCPKMT-204ENST00000491402 Q9Y3F1 56 aa24.3■■□□□ 1.48
VCPKMT-204ENST00000491402 KIAA0100Q14667 2235 aaKnown RBP24.3■■□□□ 1.48
VCPKMT-204ENST00000491402 DUSP11O75319 330 aaKnown RBP24.29■■□□□ 1.48
VCPKMT-204ENST00000491402 LYPLA2O95372 231 aa24.29■■□□□ 1.48
VCPKMT-204ENST00000491402 LHX8Q68G74 356 aa24.29■■□□□ 1.48
VCPKMT-204ENST00000491402 PIGOQ8TEQ8 1089 aa24.29■■□□□ 1.48
VCPKMT-204ENST00000491402 TNMDQ9H2S6 317 aa24.29■■□□□ 1.48
VCPKMT-204ENST00000491402 MAGEF1Q9HAY2 307 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms