RNA–Protein interactions for RNA: ENST00000491233.1

COL6A3-211, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 3

Gene COL6A3, Length 652 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-211ENST00000491233 SDF4Q9BRK5 362 aa15.59■□□□□ 0.09
COL6A3-211ENST00000491233 BARHL2Q9NY43 387 aa15.59■□□□□ 0.09
COL6A3-211ENST00000491233 SLC9A2Q9UBY0 812 aa15.59■□□□□ 0.09
COL6A3-211ENST00000491233 COG5Q9UP83 839 aa15.59■□□□□ 0.09
COL6A3-211ENST00000491233 MBLAC1A4D2B0 266 aaPredicted RBP15.58■□□□□ 0.08
COL6A3-211ENST00000491233 SMCO2A6NFE2 343 aa15.58■□□□□ 0.08
COL6A3-211ENST00000491233 UPP2O95045 317 aa15.58■□□□□ 0.08
COL6A3-211ENST00000491233 FOSP01100 380 aaPredicted RBP15.58■□□□□ 0.08
COL6A3-211ENST00000491233 ARP10275 920 aa15.58■□□□□ 0.08
COL6A3-211ENST00000491233 BMP1P13497 986 aa15.58■□□□□ 0.08
COL6A3-211ENST00000491233 SREBF1P36956 1147 aa15.58■□□□□ 0.08
COL6A3-211ENST00000491233 MGAT3Q09327 533 aa15.58■□□□□ 0.08
COL6A3-211ENST00000491233 AP3B2Q13367 1082 aa15.58■□□□□ 0.08
COL6A3-211ENST00000491233 RSPH3Q86UC2 560 aa15.58■□□□□ 0.08
COL6A3-211ENST00000491233 FBXO22Q8NEZ5 403 aa15.58■□□□□ 0.08
COL6A3-211ENST00000491233 DNAJB3Q8WWF6 145 aa15.58■□□□□ 0.08
COL6A3-211ENST00000491233 TOP1MTQ969P6 601 aa15.58■□□□□ 0.08
COL6A3-211ENST00000491233 ZBTB10Q96DT7 871 aa15.58■□□□□ 0.08
COL6A3-211ENST00000491233 JAKMIP1Q96N16 626 aaKnown RBP15.58■□□□□ 0.08
COL6A3-211ENST00000491233 YME1L1Q96TA2 773 aa15.58■□□□□ 0.08
COL6A3-211ENST00000491233 LMCD1Q9NZU5 365 aa15.58■□□□□ 0.08
COL6A3-211ENST00000491233 NFASCO94856 1347 aa15.58■□□□□ 0.08
COL6A3-211ENST00000491233 KIAA1671Q9BY89 1806 aa15.57■□□□□ 0.08
COL6A3-211ENST00000491233 CLK2P49760 499 aaKnown RBP15.57■□□□□ 0.08
COL6A3-211ENST00000491233 METAP2P50579 478 aaKnown RBP eCLIP15.57■□□□□ 0.08
COL6A3-211ENST00000491233 ACTR2P61160 394 aa15.57■□□□□ 0.08
COL6A3-211ENST00000491233 APOBRQ0VD83 1088 aa15.57■□□□□ 0.08
COL6A3-211ENST00000491233 ITGB3BPQ13352 177 aaPredicted RBP15.57■□□□□ 0.08
COL6A3-211ENST00000491233 LPIN1Q14693 890 aa15.57■□□□□ 0.08
COL6A3-211ENST00000491233 CEP55Q53EZ4 464 aa15.57■□□□□ 0.08
COL6A3-211ENST00000491233 MARCH8Q5T0T0 291 aa15.57■□□□□ 0.08
COL6A3-211ENST00000491233 Q6ZUG5 572 aa15.57■□□□□ 0.08
COL6A3-211ENST00000491233 AZI2Q9H6S1 392 aa15.57■□□□□ 0.08
COL6A3-211ENST00000491233 AGO4Q9HCK5 861 aaKnown RBP15.57■□□□□ 0.08
COL6A3-211ENST00000491233 TRPC6Q9Y210 931 aa15.57■□□□□ 0.08
COL6A3-211ENST00000491233 CDY2AQ9Y6F7 541 aa15.57■□□□□ 0.08
COL6A3-211ENST00000491233 NID2Q14112 1375 aa15.57■□□□□ 0.08
COL6A3-211ENST00000491233 WDR81Q562E7 1941 aa15.56■□□□□ 0.08
COL6A3-211ENST00000491233 INSRRP14616 1297 aa15.56■□□□□ 0.08
COL6A3-211ENST00000491233 HSPA4P34932 840 aa15.56■□□□□ 0.08
COL6A3-211ENST00000491233 ADD1P35611 737 aaKnown RBP15.56■□□□□ 0.08
COL6A3-211ENST00000491233 MRPS6P82932 125 aaKnown RBP15.56■□□□□ 0.08
COL6A3-211ENST00000491233 PLCB4Q15147 1175 aa15.56■□□□□ 0.08
COL6A3-211ENST00000491233 PFKFB3Q16875 520 aaPredicted RBP15.56■□□□□ 0.08
COL6A3-211ENST00000491233 JAKMIP3Q5VZ66 844 aa15.56■□□□□ 0.08
COL6A3-211ENST00000491233 BLOC1S2Q6QNY1 142 aa15.56■□□□□ 0.08
COL6A3-211ENST00000491233 TRAPPC12Q8WVT3 735 aa15.56■□□□□ 0.08
COL6A3-211ENST00000491233 KCNB2Q92953 911 aa15.56■□□□□ 0.08
COL6A3-211ENST00000491233 BRF1Q92994 677 aa15.56■□□□□ 0.08
COL6A3-211ENST00000491233 HLA-CQ95604 372 aa15.56■□□□□ 0.08
COL6A3-211ENST00000491233 SAMD11Q96NU1 681 aa15.56■□□□□ 0.08
COL6A3-211ENST00000491233 FAM49AQ9H0Q0 323 aaPredicted RBP15.56■□□□□ 0.08
COL6A3-211ENST00000491233 GLT8D2Q9H1C3 349 aa15.56■□□□□ 0.08
COL6A3-211ENST00000491233 SNX14Q9Y5W7 946 aa15.56■□□□□ 0.08
COL6A3-211ENST00000491233 MYH9P35579 1960 aaKnown RBP15.56■□□□□ 0.08
COL6A3-211ENST00000491233 TTC3P53804 2025 aa15.55■□□□□ 0.08
COL6A3-211ENST00000491233 RRN3P2A6NIE6 340 aa15.55■□□□□ 0.08
COL6A3-211ENST00000491233 DDX39AO00148 427 aaKnown RBP15.55■□□□□ 0.08
COL6A3-211ENST00000491233 MEIS1O00470 390 aa15.55■□□□□ 0.08
COL6A3-211ENST00000491233 SCG2P13521 617 aa15.55■□□□□ 0.08
COL6A3-211ENST00000491233 ZNF76P36508 570 aa15.55■□□□□ 0.08
COL6A3-211ENST00000491233 EPC2Q52LR7 807 aa15.55■□□□□ 0.08
COL6A3-211ENST00000491233 FBXO47Q5MNV8 452 aa15.55■□□□□ 0.08
COL6A3-211ENST00000491233 CCDC136Q96JN2 1154 aa15.55■□□□□ 0.08
COL6A3-211ENST00000491233 BRWD1Q9NSI6 2320 aa15.54■□□□□ 0.08
COL6A3-211ENST00000491233 CCDC196A0A1B0GTZ2 297 aa15.54■□□□□ 0.08
COL6A3-211ENST00000491233 ESYT2A0FGR8 921 aa15.54■□□□□ 0.08
COL6A3-211ENST00000491233 CCNE2O96020 404 aa15.54■□□□□ 0.08
COL6A3-211ENST00000491233 RPLP2P05387 115 aaKnown RBP15.54■□□□□ 0.08
COL6A3-211ENST00000491233 STAT5BP51692 787 aa15.54■□□□□ 0.08
COL6A3-211ENST00000491233 TSHZ1Q6ZSZ6 1077 aa15.54■□□□□ 0.08
COL6A3-211ENST00000491233 NIPA1Q7RTP0 329 aa15.54■□□□□ 0.08
COL6A3-211ENST00000491233 PLPPR4Q7Z2D5 763 aa15.54■□□□□ 0.08
COL6A3-211ENST00000491233 PLA2G4DQ86XP0 818 aa15.54■□□□□ 0.08
COL6A3-211ENST00000491233 TRPV2Q9Y5S1 764 aa15.54■□□□□ 0.08
COL6A3-211ENST00000491233 EVPLQ92817 2033 aa15.53■□□□□ 0.08
COL6A3-211ENST00000491233 ADGRA3Q8IWK6 1321 aa15.53■□□□□ 0.08
COL6A3-211ENST00000491233 FAM86B1E9PN63 330 aa15.53■□□□□ 0.08
COL6A3-211ENST00000491233 ADAMTS3O15072 1205 aa15.53■□□□□ 0.08
COL6A3-211ENST00000491233 FAM86B2P0C5J1 330 aa15.53■□□□□ 0.08
COL6A3-211ENST00000491233 RPS6KB1P23443 525 aa15.53■□□□□ 0.08
COL6A3-211ENST00000491233 TMEM62Q0P6H9 643 aa15.53■□□□□ 0.08
COL6A3-211ENST00000491233 GPM6BQ13491 265 aa15.53■□□□□ 0.08
COL6A3-211ENST00000491233 TMEM192Q8IY95 271 aa15.53■□□□□ 0.08
COL6A3-211ENST00000491233 REXO1Q8N1G1 1221 aaKnown RBP15.53■□□□□ 0.08
COL6A3-211ENST00000491233 CCDC12Q8WUD4 166 aaPredicted RBP15.53■□□□□ 0.08
COL6A3-211ENST00000491233 CRYGNQ8WXF5 182 aa15.53■□□□□ 0.08
COL6A3-211ENST00000491233 TNPO1Q92973 898 aaKnown RBP15.53■□□□□ 0.08
COL6A3-211ENST00000491233 PHKBQ93100 1093 aa15.53■□□□□ 0.08
COL6A3-211ENST00000491233 MRPL38Q96DV4 380 aaKnown RBP15.53■□□□□ 0.08
COL6A3-211ENST00000491233 UBE2ZQ9H832 354 aaPredicted RBP15.53■□□□□ 0.08
COL6A3-211ENST00000491233 AGO3Q9H9G7 860 aaKnown RBP15.53■□□□□ 0.08
COL6A3-211ENST00000491233 IGLV3-22A0A075B6J6 115 aa15.52■□□□□ 0.08
COL6A3-211ENST00000491233 POTEB3A0JP26 581 aa15.52■□□□□ 0.08
COL6A3-211ENST00000491233 H3BNC9 293 aa15.52■□□□□ 0.08
COL6A3-211ENST00000491233 M0QZ92 97 aa15.52■□□□□ 0.08
COL6A3-211ENST00000491233 BACH1O14867 736 aa15.52■□□□□ 0.08
COL6A3-211ENST00000491233 REC8O95072 547 aa15.52■□□□□ 0.08
COL6A3-211ENST00000491233 ATG7O95352 703 aa15.52■□□□□ 0.08
COL6A3-211ENST00000491233 CD52P31358 61 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms