RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 CHRNA1P02708 482 aa20.52■□□□□ 0.88
HMGN1-219ENST00000491183 CYP3A4P08684 503 aa20.52■□□□□ 0.88
HMGN1-219ENST00000491183 ZNF76P36508 570 aa20.52■□□□□ 0.88
HMGN1-219ENST00000491183 CCDC85BQ15834 202 aaPredicted RBP20.52■□□□□ 0.88
HMGN1-219ENST00000491183 GRIK4Q16099 956 aa20.52■□□□□ 0.88
HMGN1-219ENST00000491183 RPAINQ86UA6 219 aa20.52■□□□□ 0.88
HMGN1-219ENST00000491183 ZBED2Q9BTP6 218 aa20.52■□□□□ 0.88
HMGN1-219ENST00000491183 TM6SF1Q9BZW5 370 aa20.52■□□□□ 0.88
HMGN1-219ENST00000491183 CYP46A1Q9Y6A2 500 aa20.52■□□□□ 0.88
HMGN1-219ENST00000491183 MBLAC1A4D2B0 266 aaPredicted RBP20.51■□□□□ 0.87
HMGN1-219ENST00000491183 CCNE2O96020 404 aa20.51■□□□□ 0.87
HMGN1-219ENST00000491183 INSRRP14616 1297 aa20.51■□□□□ 0.87
HMGN1-219ENST00000491183 AKAP17AQ02040 695 aaKnown RBP20.51■□□□□ 0.87
HMGN1-219ENST00000491183 PLA2G4DQ86XP0 818 aa20.51■□□□□ 0.87
HMGN1-219ENST00000491183 CCDC12Q8WUD4 166 aaPredicted RBP20.51■□□□□ 0.87
HMGN1-219ENST00000491183 ZBTB10Q96DT7 871 aa20.51■□□□□ 0.87
HMGN1-219ENST00000491183 RAD9AQ99638 391 aa20.51■□□□□ 0.87
HMGN1-219ENST00000491183 UPF3BQ9BZI7 483 aaKnown RBP20.51■□□□□ 0.87
HMGN1-219ENST00000491183 DHX15O43143 795 aaKnown RBP20.5■□□□□ 0.87
HMGN1-219ENST00000491183 EDIL3O43854 480 aa20.5■□□□□ 0.87
HMGN1-219ENST00000491183 GNA11P29992 359 aa20.5■□□□□ 0.87
HMGN1-219ENST00000491183 MGAT3Q09327 533 aa20.5■□□□□ 0.87
HMGN1-219ENST00000491183 MCTP2Q6DN12 878 aa20.5■□□□□ 0.87
HMGN1-219ENST00000491183 FAM117BQ6P1L5 589 aa20.5■□□□□ 0.87
HMGN1-219ENST00000491183 TAF2Q6P1X5 1199 aa20.5■□□□□ 0.87
HMGN1-219ENST00000491183 PLPPR4Q7Z2D5 763 aa20.5■□□□□ 0.87
HMGN1-219ENST00000491183 REXO1Q8N1G1 1221 aaKnown RBP20.5■□□□□ 0.87
HMGN1-219ENST00000491183 RASGRP4Q8TDF6 673 aa20.5■□□□□ 0.87
HMGN1-219ENST00000491183 ARNTL2Q8WYA1 636 aa20.5■□□□□ 0.87
HMGN1-219ENST00000491183 SEPT8Q92599 483 aa20.5■□□□□ 0.87
HMGN1-219ENST00000491183 UIMC1Q96RL1 719 aa20.5■□□□□ 0.87
HMGN1-219ENST00000491183 VPS54Q9P1Q0 977 aa20.5■□□□□ 0.87
HMGN1-219ENST00000491183 TUBE1Q9UJT0 475 aa20.5■□□□□ 0.87
HMGN1-219ENST00000491183 SIP14410 1827 aa20.5■□□□□ 0.87
HMGN1-219ENST00000491183 IGKV6D-21A0A0A0MT36 114 aa20.49■□□□□ 0.87
HMGN1-219ENST00000491183 DDX39AO00148 427 aaKnown RBP20.49■□□□□ 0.87
HMGN1-219ENST00000491183 POU3F3P20264 500 aaPredicted RBP20.49■□□□□ 0.87
HMGN1-219ENST00000491183 STAT5BP51692 787 aa20.49■□□□□ 0.87
HMGN1-219ENST00000491183 IGBP1P78318 339 aa20.49■□□□□ 0.87
HMGN1-219ENST00000491183 PLCB4Q15147 1175 aa20.49■□□□□ 0.87
HMGN1-219ENST00000491183 DNAJB3Q8WWF6 145 aa20.49■□□□□ 0.87
HMGN1-219ENST00000491183 ZNF274Q96GC6 653 aaPredicted RBP20.49■□□□□ 0.87
HMGN1-219ENST00000491183 AZI2Q9H6S1 392 aa20.49■□□□□ 0.87
HMGN1-219ENST00000491183 MTCH2Q9Y6C9 303 aa20.49■□□□□ 0.87
HMGN1-219ENST00000491183 RRN3P2A6NIE6 340 aa20.48■□□□□ 0.87
HMGN1-219ENST00000491183 AMHP03971 560 aa20.48■□□□□ 0.87
HMGN1-219ENST00000491183 ERICH6BQ5W0A0 696 aa20.48■□□□□ 0.87
HMGN1-219ENST00000491183 ABHD15Q6UXT9 468 aa20.48■□□□□ 0.87
HMGN1-219ENST00000491183 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.47■□□□□ 0.87
HMGN1-219ENST00000491183 IPO5O00410 1097 aaKnown RBP20.47■□□□□ 0.87
HMGN1-219ENST00000491183 KRT40Q6A162 431 aa20.47■□□□□ 0.87
HMGN1-219ENST00000491183 MYOCDQ8IZQ8 938 aa20.47■□□□□ 0.87
HMGN1-219ENST00000491183 TRAPPC12Q8WVT3 735 aa20.47■□□□□ 0.87
HMGN1-219ENST00000491183 SH3GLB2Q9NR46 395 aa20.47■□□□□ 0.87
HMGN1-219ENST00000491183 PDRG1Q9NUG6 133 aa20.47■□□□□ 0.87
HMGN1-219ENST00000491183 TRPC6Q9Y210 931 aa20.47■□□□□ 0.87
HMGN1-219ENST00000491183 LINC01553A4QN01 128 aa20.46■□□□□ 0.87
HMGN1-219ENST00000491183 LPXNO60711 386 aa20.46■□□□□ 0.87
HMGN1-219ENST00000491183 GHRP10912 638 aa20.46■□□□□ 0.87
HMGN1-219ENST00000491183 CIITAP33076 1130 aa20.46■□□□□ 0.87
HMGN1-219ENST00000491183 HTRA4P83105 476 aaPredicted RBP20.46■□□□□ 0.87
HMGN1-219ENST00000491183 SSRP1Q08945 709 aaKnown RBP20.46■□□□□ 0.87
HMGN1-219ENST00000491183 STK3Q13188 491 aa20.46■□□□□ 0.87
HMGN1-219ENST00000491183 GRB10Q13322 594 aa20.46■□□□□ 0.87
HMGN1-219ENST00000491183 LPIN1Q14693 890 aa20.46■□□□□ 0.87
HMGN1-219ENST00000491183 MICALL1Q8N3F8 863 aa20.46■□□□□ 0.87
HMGN1-219ENST00000491183 CCDC148Q8NFR7 591 aa20.46■□□□□ 0.87
HMGN1-219ENST00000491183 BICD2Q8TD16 824 aa20.46■□□□□ 0.87
HMGN1-219ENST00000491183 APBB2Q92870 758 aa20.46■□□□□ 0.87
HMGN1-219ENST00000491183 TOP1MTQ969P6 601 aa20.46■□□□□ 0.87
HMGN1-219ENST00000491183 ZNF577Q9BSK1 485 aa20.46■□□□□ 0.87
HMGN1-219ENST00000491183 IFIH1Q9BYX4 1025 aaKnown RBP20.46■□□□□ 0.87
HMGN1-219ENST00000491183 CDY2AQ9Y6F7 541 aa20.46■□□□□ 0.87
HMGN1-219ENST00000491183 PRRC2BQ5JSZ5 2229 aaKnown RBP20.46■□□□□ 0.87
HMGN1-219ENST00000491183 POTEB3A0JP26 581 aa20.45■□□□□ 0.86
HMGN1-219ENST00000491183 ERVK-21P61565 698 aa20.45■□□□□ 0.86
HMGN1-219ENST00000491183 POTEBQ6S5H4 581 aa20.45■□□□□ 0.86
HMGN1-219ENST00000491183 RSPH3Q86UC2 560 aa20.45■□□□□ 0.86
HMGN1-219ENST00000491183 CCDC60Q8IWA6 550 aaPredicted RBP20.45■□□□□ 0.86
HMGN1-219ENST00000491183 TNPO1Q92973 898 aaKnown RBP20.45■□□□□ 0.86
HMGN1-219ENST00000491183 LENG9Q96B70 501 aa20.45■□□□□ 0.86
HMGN1-219ENST00000491183 INSL6Q9Y581 213 aa20.45■□□□□ 0.86
HMGN1-219ENST00000491183 PCDHA2Q9Y5H9 948 aa20.45■□□□□ 0.86
HMGN1-219ENST00000491183 ATP4AP20648 1035 aa20.44■□□□□ 0.86
HMGN1-219ENST00000491183 SLC26A2P50443 739 aa20.44■□□□□ 0.86
HMGN1-219ENST00000491183 NLRP5P59047 1200 aa20.44■□□□□ 0.86
HMGN1-219ENST00000491183 MRPS6P82932 125 aaKnown RBP20.44■□□□□ 0.86
HMGN1-219ENST00000491183 PRR16Q569H4 304 aa20.44■□□□□ 0.86
HMGN1-219ENST00000491183 FBXO47Q5MNV8 452 aa20.44■□□□□ 0.86
HMGN1-219ENST00000491183 SWSAP1Q6NVH7 229 aa20.44■□□□□ 0.86
HMGN1-219ENST00000491183 TRIM22Q8IYM9 498 aa20.44■□□□□ 0.86
HMGN1-219ENST00000491183 SP7Q8TDD2 431 aaPredicted RBP20.44■□□□□ 0.86
HMGN1-219ENST00000491183 TGS1Q96RS0 853 aaKnown RBP20.44■□□□□ 0.86
HMGN1-219ENST00000491183 FAM49AQ9H0Q0 323 aaPredicted RBP20.44■□□□□ 0.86
HMGN1-219ENST00000491183 SUGCTQ9HAC7 445 aa20.44■□□□□ 0.86
HMGN1-219ENST00000491183 TBC1D22BQ9NU19 505 aa20.44■□□□□ 0.86
HMGN1-219ENST00000491183 MTUS1Q9ULD2 1270 aa20.44■□□□□ 0.86
HMGN1-219ENST00000491183 TRANK1O15050 2925 aa20.43■□□□□ 0.86
HMGN1-219ENST00000491183 COL4A4P53420 1690 aaPredicted RBP20.43■□□□□ 0.86
HMGN1-219ENST00000491183 CPLX1O14810 134 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms