RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	MAFG	O15525	162 aa		6.99	□□□□□ -1.29
FN1-223	ENST00000490833	ECE2	O60344	883 aa		6.99	□□□□□ -1.29
FN1-223	ENST00000490833	N4BP1	O75113	896 aa	Known RBP	6.99	□□□□□ -1.29
FN1-223	ENST00000490833	TBCA	O75347	108 aa	Known RBP	6.99	□□□□□ -1.29
FN1-223	ENST00000490833	ASNS	P08243	561 aa		6.99	□□□□□ -1.29
FN1-223	ENST00000490833	POLR2M	P0CAP2	368 aa		6.99	□□□□□ -1.29
FN1-223	ENST00000490833	BCR	P11274	1271 aa		6.99	□□□□□ -1.29
FN1-223	ENST00000490833	ARHGAP4	P98171	946 aa		6.99	□□□□□ -1.29
FN1-223	ENST00000490833	ATP2B2	Q01814	1243 aa		6.99	□□□□□ -1.29
FN1-223	ENST00000490833	ENPEP	Q07075	957 aa		6.99	□□□□□ -1.29
FN1-223	ENST00000490833	STK4	Q13043	487 aa		6.99	□□□□□ -1.29
FN1-223	ENST00000490833	GRB10	Q13322	594 aa		6.99	□□□□□ -1.29
FN1-223	ENST00000490833	ADAM9	Q13443	819 aa		6.99	□□□□□ -1.29
FN1-223	ENST00000490833	DLGAP5	Q15398	846 aa		6.99	□□□□□ -1.29
FN1-223	ENST00000490833	BMT2	Q1RMZ1	405 aa		6.99	□□□□□ -1.29
FN1-223	ENST00000490833	QRICH1	Q2TAL8	776 aa		6.99	□□□□□ -1.29
FN1-223	ENST00000490833	SFMBT2	Q5VUG0	894 aa		6.99	□□□□□ -1.29
FN1-223	ENST00000490833	RAD9B	Q6WBX8	426 aa		6.99	□□□□□ -1.29
FN1-223	ENST00000490833	PTF1A	Q7RTS3	328 aa		6.99	□□□□□ -1.29
FN1-223	ENST00000490833	COL23A1	Q86Y22	540 aa	Predicted RBP	6.99	□□□□□ -1.29
FN1-223	ENST00000490833	SMYD4	Q8IYR2	804 aa	Predicted RBP	6.99	□□□□□ -1.29
FN1-223	ENST00000490833	CCDC24	Q8N4L8	307 aa		6.99	□□□□□ -1.29
FN1-223	ENST00000490833	EIF1AD	Q8N9N8	165 aa	Known RBP	6.99	□□□□□ -1.29
FN1-223	ENST00000490833	TTC13	Q8NBP0	860 aa		6.99	□□□□□ -1.29
FN1-223	ENST00000490833	MSANTD4	Q8NCY6	345 aa		6.99	□□□□□ -1.29
FN1-223	ENST00000490833	RASGRP4	Q8TDF6	673 aa		6.99	□□□□□ -1.29
FN1-223	ENST00000490833	JAKMIP2	Q96AA8	810 aa		6.99	□□□□□ -1.29
FN1-223	ENST00000490833	COA7	Q96BR5	231 aa		6.99	□□□□□ -1.29
FN1-223	ENST00000490833	NOX5	Q96PH1	765 aa		6.99	□□□□□ -1.29
FN1-223	ENST00000490833	RIT2	Q99578	217 aa		6.99	□□□□□ -1.29
FN1-223	ENST00000490833	DUSP9	Q99956	384 aa	Known RBP	6.99	□□□□□ -1.29
FN1-223	ENST00000490833	MMTAG2	Q9BU76	263 aa	Known RBP	6.99	□□□□□ -1.29
FN1-223	ENST00000490833	ANO3	Q9BYT9	981 aa		6.99	□□□□□ -1.29
FN1-223	ENST00000490833	IFIH1	Q9BYX4	1025 aa	Known RBP	6.99	□□□□□ -1.29
FN1-223	ENST00000490833	TTYH3	Q9C0H2	523 aa		6.99	□□□□□ -1.29
FN1-223	ENST00000490833	OLFML3	Q9NRN5	406 aa		6.99	□□□□□ -1.29
FN1-223	ENST00000490833	BLOC1S4	Q9NUP1	217 aa		6.99	□□□□□ -1.29
FN1-223	ENST00000490833	INTU	Q9ULD6	942 aa		6.99	□□□□□ -1.29
FN1-223	ENST00000490833	ODF2L	Q9ULJ1	636 aa		6.99	□□□□□ -1.29
FN1-223	ENST00000490833	MTMR7	Q9Y216	660 aa		6.99	□□□□□ -1.29
FN1-223	ENST00000490833	DIS3	Q9Y2L1	958 aa	Known RBP	6.99	□□□□□ -1.29
FN1-223	ENST00000490833	TMX2	Q9Y320	296 aa		6.99	□□□□□ -1.29
FN1-223	ENST00000490833	MYH1	P12882	1939 aa		6.99	□□□□□ -1.29
FN1-223	ENST00000490833	QSER1	Q2KHR3	1735 aa		6.98	□□□□□ -1.29
FN1-223	ENST00000490833	GRID2IP	A4D2P6	1211 aa		6.98	□□□□□ -1.29
FN1-223	ENST00000490833	MYMK	A6NI61	221 aa		6.98	□□□□□ -1.29
FN1-223	ENST00000490833		B4DLN1	442 aa		6.98	□□□□□ -1.29
FN1-223	ENST00000490833	USP17L10	C9JJH3	530 aa		6.98	□□□□□ -1.29
FN1-223	ENST00000490833		H0YCG3	227 aa		6.98	□□□□□ -1.29
FN1-223	ENST00000490833	RBAK-RBAKDN	I3L0D1	243 aa		6.98	□□□□□ -1.29
FN1-223	ENST00000490833	P4HA2	O15460	535 aa		6.98	□□□□□ -1.29
FN1-223	ENST00000490833	PJA2	O43164	708 aa		6.98	□□□□□ -1.29
FN1-223	ENST00000490833	FLOT1	O75955	427 aa		6.98	□□□□□ -1.29
FN1-223	ENST00000490833	EYA4	O95677	639 aa		6.98	□□□□□ -1.29
FN1-223	ENST00000490833	VIL1	P09327	827 aa	Known RBP	6.98	□□□□□ -1.29
FN1-223	ENST00000490833	EPB41	P11171	864 aa	Known RBP	6.98	□□□□□ -1.29
FN1-223	ENST00000490833	XRCC5	P13010	732 aa	Known RBP	6.98	□□□□□ -1.29
FN1-223	ENST00000490833	RPS12	P25398	132 aa	Known RBP	6.98	□□□□□ -1.29
FN1-223	ENST00000490833	RXRB	P28702	533 aa		6.98	□□□□□ -1.29
FN1-223	ENST00000490833	CDC25A	P30304	524 aa		6.98	□□□□□ -1.29
FN1-223	ENST00000490833	MCM6	Q14566	821 aa		6.98	□□□□□ -1.29
FN1-223	ENST00000490833	GRIK5	Q16478	980 aa		6.98	□□□□□ -1.29
FN1-223	ENST00000490833	KNOP1	Q1ED39	458 aa	Known RBP	6.98	□□□□□ -1.29
FN1-223	ENST00000490833	CFAP221	Q4G0U5	840 aa		6.98	□□□□□ -1.29
FN1-223	ENST00000490833	HSP90AA4P	Q58FG1	418 aa		6.98	□□□□□ -1.29
FN1-223	ENST00000490833	NOM1	Q5C9Z4	860 aa	Known RBP	6.98	□□□□□ -1.29
FN1-223	ENST00000490833	FBXO38	Q6PIJ6	1188 aa		6.98	□□□□□ -1.29
FN1-223	ENST00000490833	POTEA	Q6S8J7	498 aa		6.98	□□□□□ -1.29
FN1-223	ENST00000490833	HS2ST1	Q7LGA3	356 aa		6.98	□□□□□ -1.29
FN1-223	ENST00000490833	ZC3H3	Q8IXZ2	948 aa	Known RBP	6.98	□□□□□ -1.29
FN1-223	ENST00000490833	SYCE1	Q8N0S2	351 aa		6.98	□□□□□ -1.29
FN1-223	ENST00000490833	LRRC47	Q8N1G4	583 aa	Known RBP	6.98	□□□□□ -1.29
FN1-223	ENST00000490833	TTLL6	Q8N841	843 aa		6.98	□□□□□ -1.29
FN1-223	ENST00000490833	TBC1D5	Q92609	795 aa		6.98	□□□□□ -1.29
FN1-223	ENST00000490833	STAM	Q92783	540 aa		6.98	□□□□□ -1.29
FN1-223	ENST00000490833	HAS1	Q92839	578 aa		6.98	□□□□□ -1.29
FN1-223	ENST00000490833	WDR24	Q96S15	920 aa		6.98	□□□□□ -1.29
FN1-223	ENST00000490833	CSRNP1	Q96S65	589 aa		6.98	□□□□□ -1.29
FN1-223	ENST00000490833	TANGO6	Q9C0B7	1094 aa		6.98	□□□□□ -1.29
FN1-223	ENST00000490833	TMEM206	Q9H813	350 aa		6.98	□□□□□ -1.29
FN1-223	ENST00000490833	MMRN2	Q9H8L6	949 aa		6.98	□□□□□ -1.29
FN1-223	ENST00000490833	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	6.98	□□□□□ -1.29
FN1-223	ENST00000490833	SLC39A2	Q9NP94	309 aa		6.98	□□□□□ -1.29
FN1-223	ENST00000490833	TYW1	Q9NV66	732 aa	Known RBP	6.98	□□□□□ -1.29
FN1-223	ENST00000490833	AIPL1	Q9NZN9	384 aa		6.98	□□□□□ -1.29
FN1-223	ENST00000490833	CWC15	Q9P013	229 aa	Known RBP	6.98	□□□□□ -1.29
FN1-223	ENST00000490833	ARMCX3	Q9UH62	379 aa	Predicted RBP	6.98	□□□□□ -1.29
FN1-223	ENST00000490833	GUCA1B	Q9UMX6	200 aa		6.98	□□□□□ -1.29
FN1-223	ENST00000490833	KIAA1024	Q9UPX6	916 aa		6.98	□□□□□ -1.29
FN1-223	ENST00000490833	NRXN2	Q9P2S2	1712 aa		6.98	□□□□□ -1.29
FN1-223	ENST00000490833	FRMPD2	Q68DX3	1309 aa	Predicted RBP	6.98	□□□□□ -1.29
FN1-223	ENST00000490833	FOCAD	Q5VW36	1801 aa		6.97	□□□□□ -1.29
FN1-223	ENST00000490833		F8W031	263 aa	Predicted RBP	6.97	□□□□□ -1.29
FN1-223	ENST00000490833	SMIM22	K7EJ46	135 aa		6.97	□□□□□ -1.29
FN1-223	ENST00000490833	WNT7A	O00755	349 aa		6.97	□□□□□ -1.29
FN1-223	ENST00000490833	MEIS2	O14770	477 aa		6.97	□□□□□ -1.29
FN1-223	ENST00000490833	MAPK13	O15264	365 aa		6.97	□□□□□ -1.29
FN1-223	ENST00000490833	ZRANB2	O95218	330 aa	Known RBP eCLIP	6.97	□□□□□ -1.29
FN1-223	ENST00000490833	VEGFA	P15692	232 aa	Predicted RBP	6.97	□□□□□ -1.29
FN1-223	ENST00000490833	PSMC2	P35998	433 aa	Known RBP	6.97	□□□□□ -1.29

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms