RNA–Protein interactions for RNA: ENST00000490008.1

COMMD2-206, Transcript of COMM domain containing 2, humanhuman

TSL 2

Gene COMMD2, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-206ENST00000490008 PTPN11Q06124 597 aaPredicted RBP16.08■□□□□ 0.16
COMMD2-206ENST00000490008 ATL3Q6DD88 541 aa16.08■□□□□ 0.16
COMMD2-206ENST00000490008 NFRKBQ6P4R8 1299 aa16.08■□□□□ 0.16
COMMD2-206ENST00000490008 TRMT1LQ7Z2T5 733 aaKnown RBP16.08■□□□□ 0.16
COMMD2-206ENST00000490008 ATP6V0A1Q93050 837 aa16.08■□□□□ 0.16
COMMD2-206ENST00000490008 LRWD1Q9UFC0 647 aa16.08■□□□□ 0.16
COMMD2-206ENST00000490008 VAV3Q9UKW4 847 aa16.08■□□□□ 0.16
COMMD2-206ENST00000490008 TRPC6Q9Y210 931 aa16.08■□□□□ 0.16
COMMD2-206ENST00000490008 NOD1Q9Y239 953 aa16.08■□□□□ 0.16
COMMD2-206ENST00000490008 CLIC4Q9Y696 253 aa16.08■□□□□ 0.16
COMMD2-206ENST00000490008 STK24Q9Y6E0 443 aa16.08■□□□□ 0.16
COMMD2-206ENST00000490008 IGKV6D-21A0A0A0MT36 114 aa16.07■□□□□ 0.16
COMMD2-206ENST00000490008 POTEB3A0JP26 581 aa16.07■□□□□ 0.16
COMMD2-206ENST00000490008 EML1O00423 815 aa16.07■□□□□ 0.16
COMMD2-206ENST00000490008 PQBP1O60828 265 aaKnown RBP16.07■□□□□ 0.16
COMMD2-206ENST00000490008 F2P00734 622 aa16.07■□□□□ 0.16
COMMD2-206ENST00000490008 P4HBP07237 508 aaKnown RBP16.07■□□□□ 0.16
COMMD2-206ENST00000490008 PRPHP41219 470 aa16.07■□□□□ 0.16
COMMD2-206ENST00000490008 RTP1P59025 263 aa16.07■□□□□ 0.16
COMMD2-206ENST00000490008 ATP2C1P98194 919 aaPredicted RBP16.07■□□□□ 0.16
COMMD2-206ENST00000490008 STK38Q15208 465 aa16.07■□□□□ 0.16
COMMD2-206ENST00000490008 LRRC26Q2I0M4 334 aa16.07■□□□□ 0.16
COMMD2-206ENST00000490008 C1orf53Q5VUE5 145 aa16.07■□□□□ 0.16
COMMD2-206ENST00000490008 ARL6IP4Q66PJ3 421 aaKnown RBP16.07■□□□□ 0.16
COMMD2-206ENST00000490008 POTEBQ6S5H4 581 aa16.07■□□□□ 0.16
COMMD2-206ENST00000490008 TRIM50Q86XT4 487 aa16.07■□□□□ 0.16
COMMD2-206ENST00000490008 TPH2Q8IWU9 490 aa16.07■□□□□ 0.16
COMMD2-206ENST00000490008 PCYT2Q99447 389 aa16.07■□□□□ 0.16
COMMD2-206ENST00000490008 RNPEPQ9H4A4 650 aa16.07■□□□□ 0.16
COMMD2-206ENST00000490008 MAFBQ9Y5Q3 323 aaPredicted RBP16.07■□□□□ 0.16
COMMD2-206ENST00000490008 MROH7Q68CQ1 1323 aa16.07■□□□□ 0.16
COMMD2-206ENST00000490008 EMSYQ7Z589 1322 aa16.06■□□□□ 0.16
COMMD2-206ENST00000490008 C17orf102A2RUQ5 167 aa16.06■□□□□ 0.16
COMMD2-206ENST00000490008 VWA3AA6NCI4 1184 aa16.06■□□□□ 0.16
COMMD2-206ENST00000490008 DDX11L8A8MPP1 907 aa16.06■□□□□ 0.16
COMMD2-206ENST00000490008 HAS3O00219 553 aa16.06■□□□□ 0.16
COMMD2-206ENST00000490008 NCLP19338 710 aaKnown RBP16.06■□□□□ 0.16
COMMD2-206ENST00000490008 QARSP47897 775 aaKnown RBP16.06■□□□□ 0.16
COMMD2-206ENST00000490008 RGS19P49795 217 aa16.06■□□□□ 0.16
COMMD2-206ENST00000490008 CDK7P50613 346 aa16.06■□□□□ 0.16
COMMD2-206ENST00000490008 FXR2P51116 673 aaKnown RBP eCLIP16.06■□□□□ 0.16
COMMD2-206ENST00000490008 PSMC5P62195 406 aa16.06■□□□□ 0.16
COMMD2-206ENST00000490008 TLE2Q04725 743 aa16.06■□□□□ 0.16
COMMD2-206ENST00000490008 B3GNT9Q6UX72 402 aa16.06■□□□□ 0.16
COMMD2-206ENST00000490008 CCDC60Q8IWA6 550 aaPredicted RBP16.06■□□□□ 0.16
COMMD2-206ENST00000490008 BANK1Q8NDB2 785 aa16.06■□□□□ 0.16
COMMD2-206ENST00000490008 AFAP1L1Q8TED9 768 aa16.06■□□□□ 0.16
COMMD2-206ENST00000490008 PPP1R13LQ8WUF5 828 aa16.06■□□□□ 0.16
COMMD2-206ENST00000490008 IPO9Q96P70 1041 aaKnown RBP16.06■□□□□ 0.16
COMMD2-206ENST00000490008 USP28Q96RU2 1077 aa16.06■□□□□ 0.16
COMMD2-206ENST00000490008 EIF2AK1Q9BQI3 630 aaKnown RBP16.06■□□□□ 0.16
COMMD2-206ENST00000490008 HDAC6Q9UBN7 1215 aa16.06■□□□□ 0.16
COMMD2-206ENST00000490008 PRKAG2Q9UGJ0 569 aa16.06■□□□□ 0.16
COMMD2-206ENST00000490008 GRIN2DO15399 1336 aa16.05■□□□□ 0.16
COMMD2-206ENST00000490008 RRN3P2A6NIE6 340 aa16.05■□□□□ 0.16
COMMD2-206ENST00000490008 HBP1O60381 514 aa16.05■□□□□ 0.16
COMMD2-206ENST00000490008 SMIM10L2AP0DMW4 78 aa16.05■□□□□ 0.16
COMMD2-206ENST00000490008 SMIM10L2BP0DMW5 78 aa16.05■□□□□ 0.16
COMMD2-206ENST00000490008 MARCKSP29966 332 aaPredicted RBP16.05■□□□□ 0.16
COMMD2-206ENST00000490008 PPFIA1Q13136 1202 aa16.05■□□□□ 0.16
COMMD2-206ENST00000490008 SLC39A14Q15043 492 aa16.05■□□□□ 0.16
COMMD2-206ENST00000490008 PLCB4Q15147 1175 aa16.05■□□□□ 0.16
COMMD2-206ENST00000490008 TRIM60Q495X7 471 aa16.05■□□□□ 0.16
COMMD2-206ENST00000490008 KRT79Q5XKE5 535 aa16.05■□□□□ 0.16
COMMD2-206ENST00000490008 OTUD6AQ7L8S5 288 aa16.05■□□□□ 0.16
COMMD2-206ENST00000490008 SLC43A3Q8NBI5 491 aa16.05■□□□□ 0.16
COMMD2-206ENST00000490008 DYDC2Q96IM9 177 aa16.05■□□□□ 0.16
COMMD2-206ENST00000490008 FAM167AQ96KS9 214 aa16.05■□□□□ 0.16
COMMD2-206ENST00000490008 TOX2Q96NM4 488 aa16.05■□□□□ 0.16
COMMD2-206ENST00000490008 ZSWIM4Q9H7M6 989 aa16.05■□□□□ 0.16
COMMD2-206ENST00000490008 TMEM39AQ9NV64 488 aa16.05■□□□□ 0.16
COMMD2-206ENST00000490008 SETD4Q9NVD3 440 aa16.05■□□□□ 0.16
COMMD2-206ENST00000490008 CIZ1Q9ULV3 898 aaPredicted RBP16.05■□□□□ 0.16
COMMD2-206ENST00000490008 ZDHHC9Q9Y397 364 aa16.05■□□□□ 0.16
COMMD2-206ENST00000490008 NR2E3Q9Y5X4 410 aa16.05■□□□□ 0.16
COMMD2-206ENST00000490008 NRCAMQ92823 1304 aa16.04■□□□□ 0.16
COMMD2-206ENST00000490008 POTEMA6NI47 508 aa16.04■□□□□ 0.16
COMMD2-206ENST00000490008 SLITRK3O94933 977 aa16.04■□□□□ 0.16
COMMD2-206ENST00000490008 INSRRP14616 1297 aa16.04■□□□□ 0.16
COMMD2-206ENST00000490008 IGBP1P78318 339 aa16.04■□□□□ 0.16
COMMD2-206ENST00000490008 CYP4A11Q02928 519 aa16.04■□□□□ 0.16
COMMD2-206ENST00000490008 MLLT1Q03111 559 aaPredicted RBP16.04■□□□□ 0.16
COMMD2-206ENST00000490008 SPIRE1Q08AE8 756 aa16.04■□□□□ 0.16
COMMD2-206ENST00000490008 CTTNQ14247 550 aaKnown RBP16.04■□□□□ 0.16
COMMD2-206ENST00000490008 PTGISQ16647 500 aa16.04■□□□□ 0.16
COMMD2-206ENST00000490008 XKR3Q5GH77 459 aa16.04■□□□□ 0.16
COMMD2-206ENST00000490008 ANKRD33Q7Z3H0 272 aa16.04■□□□□ 0.16
COMMD2-206ENST00000490008 NEK9Q8TD19 979 aa16.04■□□□□ 0.16
COMMD2-206ENST00000490008 ATP8B4Q8TF62 1192 aa16.04■□□□□ 0.16
COMMD2-206ENST00000490008 BBXQ8WY36 941 aaPredicted RBP16.04■□□□□ 0.16
COMMD2-206ENST00000490008 TRPV6Q9H1D0 765 aa16.04■□□□□ 0.16
COMMD2-206ENST00000490008 RGL1Q9NZL6 768 aa16.04■□□□□ 0.16
COMMD2-206ENST00000490008 GTF2IRD1Q9UHL9 959 aa16.04■□□□□ 0.16
COMMD2-206ENST00000490008 MYH7BA7E2Y1 1941 aa16.04■□□□□ 0.16
COMMD2-206ENST00000490008 KIAA1217Q5T5P2 1943 aa16.04■□□□□ 0.16
COMMD2-206ENST00000490008 SPTLC2O15270 562 aa16.03■□□□□ 0.16
COMMD2-206ENST00000490008 CCT6AP40227 531 aaKnown RBP16.03■□□□□ 0.16
COMMD2-206ENST00000490008 DNM1Q05193 864 aaKnown RBP16.03■□□□□ 0.16
COMMD2-206ENST00000490008 SNX17Q15036 470 aa16.03■□□□□ 0.16
COMMD2-206ENST00000490008 ZRSR1Q15695 479 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms