RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 EYA4O95677 639 aa16.08■□□□□ 0.16
VARS-227ENST00000489979 ITGB1P05556 798 aa16.08■□□□□ 0.16
VARS-227ENST00000489979 CD52P31358 61 aa16.08■□□□□ 0.16
VARS-227ENST00000489979 NUCB1Q02818 461 aa16.08■□□□□ 0.16
VARS-227ENST00000489979 WTAPQ15007 396 aa16.08■□□□□ 0.16
VARS-227ENST00000489979 XRRA1Q6P2D8 792 aa16.08■□□□□ 0.16
VARS-227ENST00000489979 ADGRD2Q7Z7M1 963 aa16.08■□□□□ 0.16
VARS-227ENST00000489979 GIMAP8Q8ND71 665 aaPredicted RBP16.08■□□□□ 0.16
VARS-227ENST00000489979 SPPL3Q8TCT6 385 aa16.08■□□□□ 0.16
VARS-227ENST00000489979 CUL5Q93034 780 aa16.08■□□□□ 0.16
VARS-227ENST00000489979 PPP2R3CQ969Q6 453 aa16.08■□□□□ 0.16
VARS-227ENST00000489979 RWDD1Q9H446 243 aaPredicted RBP16.08■□□□□ 0.16
VARS-227ENST00000489979 AGO3Q9H9G7 860 aaKnown RBP16.08■□□□□ 0.16
VARS-227ENST00000489979 ERAP1Q9NZ08 941 aa16.08■□□□□ 0.16
VARS-227ENST00000489979 CLEC1BQ9P126 229 aa16.08■□□□□ 0.16
VARS-227ENST00000489979 GSTTP1A0A1W2PQM5 241 aa16.07■□□□□ 0.16
VARS-227ENST00000489979 TMEM221A6NGB7 291 aa16.07■□□□□ 0.16
VARS-227ENST00000489979 M0R296 226 aa16.07■□□□□ 0.16
VARS-227ENST00000489979 MEIS2O14770 477 aa16.07■□□□□ 0.16
VARS-227ENST00000489979 KCNA2P16389 499 aa16.07■□□□□ 0.16
VARS-227ENST00000489979 IGBP1P78318 339 aa16.07■□□□□ 0.16
VARS-227ENST00000489979 MRPS6P82932 125 aaKnown RBP16.07■□□□□ 0.16
VARS-227ENST00000489979 PAN2Q504Q3 1202 aaKnown RBP16.07■□□□□ 0.16
VARS-227ENST00000489979 NAALADL2Q58DX5 795 aa16.07■□□□□ 0.16
VARS-227ENST00000489979 MARCH8Q5T0T0 291 aa16.07■□□□□ 0.16
VARS-227ENST00000489979 IER5LQ5T953 404 aa16.07■□□□□ 0.16
VARS-227ENST00000489979 TRIM67Q6ZTA4 783 aa16.07■□□□□ 0.16
VARS-227ENST00000489979 BMP8AQ7Z5Y6 402 aa16.07■□□□□ 0.16
VARS-227ENST00000489979 RTN4RL1Q86UN2 441 aaPredicted RBP16.07■□□□□ 0.16
VARS-227ENST00000489979 CMTR2Q8IYT2 770 aaKnown RBP16.07■□□□□ 0.16
VARS-227ENST00000489979 EFHBQ8N7U6 833 aa16.07■□□□□ 0.16
VARS-227ENST00000489979 KLHL23Q8NBE8 558 aa16.07■□□□□ 0.16
VARS-227ENST00000489979 SEPT1Q8WYJ6 367 aa16.07■□□□□ 0.16
VARS-227ENST00000489979 PBXIP1Q96AQ6 731 aa16.07■□□□□ 0.16
VARS-227ENST00000489979 ZBTB10Q96DT7 871 aa16.07■□□□□ 0.16
VARS-227ENST00000489979 FAM49AQ9H0Q0 323 aaPredicted RBP16.07■□□□□ 0.16
VARS-227ENST00000489979 USP34Q70CQ2 3546 aa16.06■□□□□ 0.16
VARS-227ENST00000489979 PIK3CDO00329 1044 aa16.06■□□□□ 0.16
VARS-227ENST00000489979 NRIP1P48552 1158 aa16.06■□□□□ 0.16
VARS-227ENST00000489979 COASYQ13057 564 aa16.06■□□□□ 0.16
VARS-227ENST00000489979 CATIPQ7Z7H3 387 aa16.06■□□□□ 0.16
VARS-227ENST00000489979 NPAS4Q8IUM7 802 aa16.06■□□□□ 0.16
VARS-227ENST00000489979 CRIPAKQ8N1N5 446 aa16.06■□□□□ 0.16
VARS-227ENST00000489979 SMRP1Q8NCR6 262 aa16.06■□□□□ 0.16
VARS-227ENST00000489979 POF1BQ8WVV4 589 aa16.06■□□□□ 0.16
VARS-227ENST00000489979 GLG1Q92896 1179 aa16.06■□□□□ 0.16
VARS-227ENST00000489979 GPRASP2Q96D09 838 aa16.06■□□□□ 0.16
VARS-227ENST00000489979 PKD2L1Q9P0L9 805 aa16.06■□□□□ 0.16
VARS-227ENST00000489979 ZDBF2Q9HCK1 2354 aa16.06■□□□□ 0.16
VARS-227ENST00000489979 LOC730098B7Z3J9 87 aa16.05■□□□□ 0.16
VARS-227ENST00000489979 IGHDP01880 384 aa16.05■□□□□ 0.16
VARS-227ENST00000489979 CYP21A2P08686 494 aa16.05■□□□□ 0.16
VARS-227ENST00000489979 PTPN5P54829 565 aa16.05■□□□□ 0.16
VARS-227ENST00000489979 ZXDAP98168 799 aa16.05■□□□□ 0.16
VARS-227ENST00000489979 SART3Q15020 963 aaKnown RBP16.05■□□□□ 0.16
VARS-227ENST00000489979 RBM23Q86U06 439 aaKnown RBP16.05■□□□□ 0.16
VARS-227ENST00000489979 RRP36Q96EU6 259 aaKnown RBP16.05■□□□□ 0.16
VARS-227ENST00000489979 CDHR1Q96JP9 859 aa16.05■□□□□ 0.16
VARS-227ENST00000489979 FTHL17Q9BXU8 183 aa16.05■□□□□ 0.16
VARS-227ENST00000489979 SMARCAD1Q9H4L7 1026 aa16.05■□□□□ 0.16
VARS-227ENST00000489979 BARX2Q9UMQ3 279 aaPredicted RBP16.05■□□□□ 0.16
VARS-227ENST00000489979 PCDHGC5Q9Y5F6 944 aa16.05■□□□□ 0.16
VARS-227ENST00000489979 U3KPZ7 1027 aaPredicted RBP16.05■□□□□ 0.16
VARS-227ENST00000489979 PLXNA4Q9HCM2 1894 aa16.05■□□□□ 0.16
VARS-227ENST00000489979 GLP2RO95838 553 aa16.04■□□□□ 0.16
VARS-227ENST00000489979 INSRRP14616 1297 aa16.04■□□□□ 0.16
VARS-227ENST00000489979 ITGB5P18084 799 aa16.04■□□□□ 0.16
VARS-227ENST00000489979 GATMP50440 423 aa16.04■□□□□ 0.16
VARS-227ENST00000489979 TMEM62Q0P6H9 643 aa16.04■□□□□ 0.16
VARS-227ENST00000489979 IER5Q5VY09 327 aa16.04■□□□□ 0.16
VARS-227ENST00000489979 RALYLQ86SE5 291 aaKnown RBP16.04■□□□□ 0.16
VARS-227ENST00000489979 SUGP1Q8IWZ8 645 aaKnown RBP16.04■□□□□ 0.16
VARS-227ENST00000489979 SPZ1Q9BXG8 430 aa16.04■□□□□ 0.16
VARS-227ENST00000489979 PADI3Q9ULW8 664 aa16.04■□□□□ 0.16
VARS-227ENST00000489979 USP15Q9Y4E8 981 aaPredicted RBP16.04■□□□□ 0.16
VARS-227ENST00000489979 TRPV2Q9Y5S1 764 aa16.04■□□□□ 0.16
VARS-227ENST00000489979 TAF6LQ9Y6J9 622 aa16.04■□□□□ 0.16
VARS-227ENST00000489979 SQORQ9Y6N5 450 aa16.04■□□□□ 0.16
VARS-227ENST00000489979 RRN3P2A6NIE6 340 aa16.03■□□□□ 0.16
VARS-227ENST00000489979 E7EWF7 191 aa16.03■□□□□ 0.16
VARS-227ENST00000489979 M0QZ92 97 aa16.03■□□□□ 0.16
VARS-227ENST00000489979 PPFIA3O75145 1194 aa16.03■□□□□ 0.16
VARS-227ENST00000489979 RPLP2P05387 115 aaKnown RBP16.03■□□□□ 0.16
VARS-227ENST00000489979 STAG3L1P0CL83 205 aa16.03■□□□□ 0.16
VARS-227ENST00000489979 SCG2P13521 617 aa16.03■□□□□ 0.16
VARS-227ENST00000489979 IBSPP21815 317 aaPredicted RBP16.03■□□□□ 0.16
VARS-227ENST00000489979 PTH1RQ03431 593 aa16.03■□□□□ 0.16
VARS-227ENST00000489979 TCF15Q12870 199 aa16.03■□□□□ 0.16
VARS-227ENST00000489979 PAK2Q13177 524 aa16.03■□□□□ 0.16
VARS-227ENST00000489979 CBX2Q14781 532 aaPredicted RBP16.03■□□□□ 0.16
VARS-227ENST00000489979 PKN1Q16512 942 aa16.03■□□□□ 0.16
VARS-227ENST00000489979 NCOA7Q8NI08 942 aa16.03■□□□□ 0.16
VARS-227ENST00000489979 PRRX2Q99811 253 aa16.03■□□□□ 0.16
VARS-227ENST00000489979 MYL10Q9BUA6 226 aa16.03■□□□□ 0.16
VARS-227ENST00000489979 SEC63Q9UGP8 760 aaKnown RBP16.03■□□□□ 0.16
VARS-227ENST00000489979 KMT2EQ8IZD2 1858 aa16.03■□□□□ 0.16
VARS-227ENST00000489979 ANTXR2P58335 489 aa16.02■□□□□ 0.16
VARS-227ENST00000489979 MTMR1Q13613 665 aa16.02■□□□□ 0.16
VARS-227ENST00000489979 AAMPQ13685 434 aa16.02■□□□□ 0.16
VARS-227ENST00000489979 FBXL6Q8N531 539 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms