RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 EGFL7Q9UHF1 273 aa5.21□□□□□ -1.58
SNRNP40-206ENST00000489853 SERTAD1Q9UHV2 236 aa5.21□□□□□ -1.58
SNRNP40-206ENST00000489853 SCOCQ9UIL1 159 aa5.21□□□□□ -1.58
SNRNP40-206ENST00000489853 DCTN4Q9UJW0 460 aa5.21□□□□□ -1.58
SNRNP40-206ENST00000489853 CAPN11Q9UMQ6 739 aa5.21□□□□□ -1.58
SNRNP40-206ENST00000489853 AGAP1Q9UPQ3 857 aa5.21□□□□□ -1.58
SNRNP40-206ENST00000489853 PCDHB11Q9Y5F2 797 aa5.21□□□□□ -1.58
SNRNP40-206ENST00000489853 MAP2P11137 1827 aaKnown RBP5.21□□□□□ -1.58
SNRNP40-206ENST00000489853 NEXMIFQ5QGS0 1516 aa5.21□□□□□ -1.58
SNRNP40-206ENST00000489853 ITSN1Q15811 1721 aa5.2□□□□□ -1.58
SNRNP40-206ENST00000489853 XRN1Q8IZH2 1706 aaKnown RBP5.2□□□□□ -1.58
SNRNP40-206ENST00000489853 NCAPD2Q15021 1401 aa5.2□□□□□ -1.58
SNRNP40-206ENST00000489853 MROH1Q8NDA8 1641 aa5.2□□□□□ -1.58
SNRNP40-206ENST00000489853 SYNRGQ9UMZ2 1314 aa5.2□□□□□ -1.58
SNRNP40-206ENST00000489853 A0A1W2PQC6 194 aa5.2□□□□□ -1.58
SNRNP40-206ENST00000489853 IGF2BP3O00425 579 aaKnown RBP eCLIP5.2□□□□□ -1.58
SNRNP40-206ENST00000489853 PRPF3O43395 683 aaKnown RBP5.2□□□□□ -1.58
SNRNP40-206ENST00000489853 CEP104O60308 925 aa5.2□□□□□ -1.58
SNRNP40-206ENST00000489853 ZPR1O75312 459 aa5.2□□□□□ -1.58
SNRNP40-206ENST00000489853 ZNF189O75820 626 aaPredicted RBP5.2□□□□□ -1.58
SNRNP40-206ENST00000489853 HEXIM1O94992 359 aaKnown RBP5.2□□□□□ -1.58
SNRNP40-206ENST00000489853 UPP2O95045 317 aa5.2□□□□□ -1.58
SNRNP40-206ENST00000489853 P4HBP07237 508 aaKnown RBP5.2□□□□□ -1.58
SNRNP40-206ENST00000489853 GLI1P08151 1106 aa5.2□□□□□ -1.58
SNRNP40-206ENST00000489853 TUBP50607 506 aa5.2□□□□□ -1.58
SNRNP40-206ENST00000489853 GUCY2FP51841 1108 aa5.2□□□□□ -1.58
SNRNP40-206ENST00000489853 CDK17Q00537 523 aa5.2□□□□□ -1.58
SNRNP40-206ENST00000489853 GUCY2DQ02846 1103 aa5.2□□□□□ -1.58
SNRNP40-206ENST00000489853 ZNF844Q08AG5 666 aa5.2□□□□□ -1.58
SNRNP40-206ENST00000489853 BNIP1Q12981 228 aa5.2□□□□□ -1.58
SNRNP40-206ENST00000489853 CFAP221Q4G0U5 840 aa5.2□□□□□ -1.58
SNRNP40-206ENST00000489853 FAM133BQ5BKY9 247 aaKnown RBP5.2□□□□□ -1.58
SNRNP40-206ENST00000489853 RNF220Q5VTB9 566 aa5.2□□□□□ -1.58
SNRNP40-206ENST00000489853 DDX46Q7L014 1031 aaKnown RBP5.2□□□□□ -1.58
SNRNP40-206ENST00000489853 RNF10Q8N5U6 811 aaKnown RBP5.2□□□□□ -1.58
SNRNP40-206ENST00000489853 ZBTB8BQ8NAP8 495 aaPredicted RBP5.2□□□□□ -1.58
SNRNP40-206ENST00000489853 SMC1BQ8NDV3 1235 aa5.2□□□□□ -1.58
SNRNP40-206ENST00000489853 SH3TC2Q8TF17 1288 aa5.2□□□□□ -1.58
SNRNP40-206ENST00000489853 BAP1Q92560 729 aa5.2□□□□□ -1.58
SNRNP40-206ENST00000489853 PTPRN2Q92932 1015 aa5.2□□□□□ -1.58
SNRNP40-206ENST00000489853 KLHL29Q96CT2 875 aa5.2□□□□□ -1.58
SNRNP40-206ENST00000489853 PBKQ96KB5 322 aa5.2□□□□□ -1.58
SNRNP40-206ENST00000489853 RAB3IPQ96QF0 476 aaPredicted RBP5.2□□□□□ -1.58
SNRNP40-206ENST00000489853 RPS6KC1Q96S38 1066 aa5.2□□□□□ -1.58
SNRNP40-206ENST00000489853 CCDC28BQ9BUN5 200 aa5.2□□□□□ -1.58
SNRNP40-206ENST00000489853 KRT23Q9C075 422 aa5.2□□□□□ -1.58
SNRNP40-206ENST00000489853 LACRTQ9GZZ8 138 aa5.2□□□□□ -1.58
SNRNP40-206ENST00000489853 UBA5Q9GZZ9 404 aa5.2□□□□□ -1.58
SNRNP40-206ENST00000489853 BOLA2Q9H3K6 86 aa5.2□□□□□ -1.58
SNRNP40-206ENST00000489853 ATP8A2Q9NTI2 1148 aa5.2□□□□□ -1.58
SNRNP40-206ENST00000489853 ZNHIT6Q9NWK9 470 aaKnown RBP5.2□□□□□ -1.58
SNRNP40-206ENST00000489853 SPATA7Q9P0W8 599 aa5.2□□□□□ -1.58
SNRNP40-206ENST00000489853 DLGAP2Q9P1A6 1054 aa5.2□□□□□ -1.58
SNRNP40-206ENST00000489853 PDP2Q9P2J9 529 aa5.2□□□□□ -1.58
SNRNP40-206ENST00000489853 ITGB1BP2Q9UKP3 347 aa5.2□□□□□ -1.58
SNRNP40-206ENST00000489853 EID1Q9Y6B2 187 aa5.2□□□□□ -1.58
SNRNP40-206ENST00000489853 BZW2Q9Y6E2 419 aaKnown RBP5.2□□□□□ -1.58
SNRNP40-206ENST00000489853 MROH2AA6NES4 1674 aa5.2□□□□□ -1.58
SNRNP40-206ENST00000489853 ZNF142P52746 1687 aaPredicted RBP5.2□□□□□ -1.58
SNRNP40-206ENST00000489853 CLTCQ00610 1675 aaKnown RBP5.2□□□□□ -1.58
SNRNP40-206ENST00000489853 KIF20BQ96Q89 1820 aa5.2□□□□□ -1.58
SNRNP40-206ENST00000489853 CEP170BQ9Y4F5 1589 aaPredicted RBP5.2□□□□□ -1.58
SNRNP40-206ENST00000489853 TTC26A0AVF1 554 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 POLR2DO15514 142 aaKnown RBP5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 CTNND1O60716 968 aaKnown RBP5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 MBD4O95243 580 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 IDO1P14902 403 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 ZFXP17010 805 aaPredicted RBP5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 EIF4BP23588 611 aaKnown RBP5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 POLD1P28340 1107 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 RXRBP28702 533 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 WEE1P30291 646 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 CDC25AP30304 524 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 GSTT1P30711 240 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 HSD17B3P37058 310 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 PSMD7P51665 324 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 CUL1Q13616 776 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 PLS1Q14651 629 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 AGERQ15109 404 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 ZNF827Q17R98 1081 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 CCDC92Q53HC0 331 aaPredicted RBP5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 SULT6B1Q6IMI4 303 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 WDR59Q6PJI9 974 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 POTEAQ6S8J7 498 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 ZNF365Q70YC5 407 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 ASRGL1Q7L266 308 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 STKLD1Q8NE28 680 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 KLHDC4Q8TBB5 520 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 ATP8B4Q8TF62 1192 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 CASKIN2Q8WXE0 1202 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 IRGQQ8WZA9 623 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 PRCCQ92733 491 aaPredicted RBP5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 GPKOWQ92917 476 aaPredicted RBP eCLIP5.19□□□□□ -1.581e-8■□□□□ 11.1
SNRNP40-206ENST00000489853 SLC35B4Q969S0 331 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 AZIN2Q96A70 460 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 EMID1Q96A84 441 aaPredicted RBP5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 FAM136AQ96C01 138 aa5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 EAF2Q96CJ1 260 aaPredicted RBP5.19□□□□□ -1.58
SNRNP40-206ENST00000489853 TLCD1Q96CP7 247 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms