RNA–Protein interactions for RNA: ENST00000489313.1

PTP4A2-206, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 2

Gene PTP4A2, Length 1,551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-206ENST00000489313 SMARCC2Q8TAQ2 1214 aa12.44□□□□□ -0.42
PTP4A2-206ENST00000489313 DNAJB3Q8WWF6 145 aa12.44□□□□□ -0.42
PTP4A2-206ENST00000489313 CLP1Q92989 425 aaKnown RBP12.44□□□□□ -0.42
PTP4A2-206ENST00000489313 ZBTB10Q96DT7 871 aa12.44□□□□□ -0.42
PTP4A2-206ENST00000489313 SENP7Q9BQF6 1050 aa12.44□□□□□ -0.42
PTP4A2-206ENST00000489313 UPF3BQ9BZI7 483 aaKnown RBP12.44□□□□□ -0.42
PTP4A2-206ENST00000489313 RWDD3Q9Y3V2 267 aa12.44□□□□□ -0.42
PTP4A2-206ENST00000489313 MEIS2O14770 477 aa12.43□□□□□ -0.42
PTP4A2-206ENST00000489313 MMP1P03956 469 aa12.43□□□□□ -0.42
PTP4A2-206ENST00000489313 PTH1RQ03431 593 aa12.43□□□□□ -0.42
PTP4A2-206ENST00000489313 CAMK1Q14012 370 aa12.43□□□□□ -0.42
PTP4A2-206ENST00000489313 GRIK4Q16099 956 aa12.43□□□□□ -0.42
PTP4A2-206ENST00000489313 FBXO47Q5MNV8 452 aa12.43□□□□□ -0.42
PTP4A2-206ENST00000489313 RNF135Q8IUD6 432 aa12.43□□□□□ -0.42
PTP4A2-206ENST00000489313 LINC01599Q8WXQ3 324 aa12.43□□□□□ -0.42
PTP4A2-206ENST00000489313 CUL5Q93034 780 aa12.43□□□□□ -0.42
PTP4A2-206ENST00000489313 ZNF689Q96CS4 500 aaPredicted RBP12.43□□□□□ -0.42
PTP4A2-206ENST00000489313 PKD2L1Q9P0L9 805 aa12.43□□□□□ -0.42
PTP4A2-206ENST00000489313 TUBE1Q9UJT0 475 aa12.43□□□□□ -0.42
PTP4A2-206ENST00000489313 GSTTP1A0A1W2PQM5 241 aa12.43□□□□□ -0.42
PTP4A2-206ENST00000489313 E7EWF7 191 aa12.43□□□□□ -0.42
PTP4A2-206ENST00000489313 DGKIO75912 1065 aa12.43□□□□□ -0.42
PTP4A2-206ENST00000489313 KCNA2P16389 499 aa12.43□□□□□ -0.42
PTP4A2-206ENST00000489313 DNAJB1P25685 340 aa12.43□□□□□ -0.42
PTP4A2-206ENST00000489313 CD52P31358 61 aa12.43□□□□□ -0.42
PTP4A2-206ENST00000489313 IGBP1P78318 339 aa12.43□□□□□ -0.42
PTP4A2-206ENST00000489313 SMAD4Q13485 552 aaKnown RBP12.43□□□□□ -0.42
PTP4A2-206ENST00000489313 MARCH8Q5T0T0 291 aa12.43□□□□□ -0.42
PTP4A2-206ENST00000489313 CATIPQ7Z7H3 387 aa12.43□□□□□ -0.42
PTP4A2-206ENST00000489313 RALYLQ86SE5 291 aaKnown RBP12.43□□□□□ -0.42
PTP4A2-206ENST00000489313 RSPH3Q86UC2 560 aa12.43□□□□□ -0.42
PTP4A2-206ENST00000489313 NLRX1Q86UT6 975 aa12.43□□□□□ -0.42
PTP4A2-206ENST00000489313 POP1Q99575 1024 aaKnown RBP12.43□□□□□ -0.42
PTP4A2-206ENST00000489313 MYL10Q9BUA6 226 aa12.43□□□□□ -0.42
PTP4A2-206ENST00000489313 AGO3Q9H9G7 860 aaKnown RBP12.43□□□□□ -0.42
PTP4A2-206ENST00000489313 CD207Q9UJ71 328 aa12.43□□□□□ -0.42
PTP4A2-206ENST00000489313 PLAGL2Q9UPG8 496 aa12.43□□□□□ -0.42
PTP4A2-206ENST00000489313 CDY2AQ9Y6F7 541 aa12.43□□□□□ -0.42
PTP4A2-206ENST00000489313 MRPL42Q9Y6G3 142 aaKnown RBP12.43□□□□□ -0.42
PTP4A2-206ENST00000489313 DMDP11532 3685 aa12.42□□□□□ -0.42
PTP4A2-206ENST00000489313 PLXNA4Q9HCM2 1894 aa12.42□□□□□ -0.42
PTP4A2-206ENST00000489313 STXBP3O00186 592 aa12.42□□□□□ -0.42
PTP4A2-206ENST00000489313 NDUFV1P49821 464 aa12.42□□□□□ -0.42
PTP4A2-206ENST00000489313 ANTXR2P58335 489 aa12.42□□□□□ -0.42
PTP4A2-206ENST00000489313 ADAM15Q13444 863 aa12.42□□□□□ -0.42
PTP4A2-206ENST00000489313 SART3Q15020 963 aaKnown RBP12.42□□□□□ -0.42
PTP4A2-206ENST00000489313 PAN2Q504Q3 1202 aaKnown RBP12.42□□□□□ -0.42
PTP4A2-206ENST00000489313 HERC4Q5GLZ8 1057 aaPredicted RBP12.42□□□□□ -0.42
PTP4A2-206ENST00000489313 XRRA1Q6P2D8 792 aa12.42□□□□□ -0.42
PTP4A2-206ENST00000489313 TSHZ1Q6ZSZ6 1077 aa12.42□□□□□ -0.42
PTP4A2-206ENST00000489313 ADGRD2Q7Z7M1 963 aa12.42□□□□□ -0.42
PTP4A2-206ENST00000489313 RTN4RL1Q86UN2 441 aaPredicted RBP12.42□□□□□ -0.42
PTP4A2-206ENST00000489313 GIMAP8Q8ND71 665 aaPredicted RBP12.42□□□□□ -0.42
PTP4A2-206ENST00000489313 SEPT1Q8WYJ6 367 aa12.42□□□□□ -0.42
PTP4A2-206ENST00000489313 GLG1Q92896 1179 aa12.42□□□□□ -0.42
PTP4A2-206ENST00000489313 RRP36Q96EU6 259 aaKnown RBP12.42□□□□□ -0.42
PTP4A2-206ENST00000489313 PLVAPQ9BX97 442 aa12.42□□□□□ -0.42
PTP4A2-206ENST00000489313 FAM49AQ9H0Q0 323 aaPredicted RBP12.42□□□□□ -0.42
PTP4A2-206ENST00000489313 KCNH6Q9H252 994 aa12.42□□□□□ -0.42
PTP4A2-206ENST00000489313 ERAP1Q9NZ08 941 aa12.42□□□□□ -0.42
PTP4A2-206ENST00000489313 SPTBN4Q9H254 2564 aa12.42□□□□□ -0.42
PTP4A2-206ENST00000489313 MBLAC1A4D2B0 266 aaPredicted RBP12.41□□□□□ -0.42
PTP4A2-206ENST00000489313 PIK3CDO00329 1044 aa12.41□□□□□ -0.42
PTP4A2-206ENST00000489313 GSPT1P15170 499 aaKnown RBP12.41□□□□□ -0.42
PTP4A2-206ENST00000489313 ITGB5P18084 799 aa12.41□□□□□ -0.42
PTP4A2-206ENST00000489313 MRPS6P82932 125 aaKnown RBP12.41□□□□□ -0.42
PTP4A2-206ENST00000489313 AAMPQ13685 434 aa12.41□□□□□ -0.42
PTP4A2-206ENST00000489313 ZNF579Q8NAF0 562 aaKnown RBP12.41□□□□□ -0.42
PTP4A2-206ENST00000489313 NCOA7Q8NI08 942 aa12.41□□□□□ -0.42
PTP4A2-206ENST00000489313 IGDCC4Q8TDY8 1250 aa12.41□□□□□ -0.42
PTP4A2-206ENST00000489313 GPRASP2Q96D09 838 aa12.41□□□□□ -0.42
PTP4A2-206ENST00000489313 MFSD14AQ96MC6 490 aa12.41□□□□□ -0.42
PTP4A2-206ENST00000489313 SPZ1Q9BXG8 430 aa12.41□□□□□ -0.42
PTP4A2-206ENST00000489313 CACNA1HO95180 2353 aa12.41□□□□□ -0.42
PTP4A2-206ENST00000489313 GALR2O43603 387 aaPredicted RBP12.4□□□□□ -0.42
PTP4A2-206ENST00000489313 PLEKHA8P1O95397 391 aa12.4□□□□□ -0.42
PTP4A2-206ENST00000489313 ITGB1P05556 798 aa12.4□□□□□ -0.42
PTP4A2-206ENST00000489313 IBSPP21815 317 aaPredicted RBP12.4□□□□□ -0.42
PTP4A2-206ENST00000489313 GATMP50440 423 aa12.4□□□□□ -0.42
PTP4A2-206ENST00000489313 TMEM62Q0P6H9 643 aa12.4□□□□□ -0.42
PTP4A2-206ENST00000489313 ZNF654Q8IZM8 581 aa12.4□□□□□ -0.42
PTP4A2-206ENST00000489313 CMTR1Q8N1G2 835 aaKnown RBP12.4□□□□□ -0.42
PTP4A2-206ENST00000489313 KLHL23Q8NBE8 558 aa12.4□□□□□ -0.42
PTP4A2-206ENST00000489313 SPPL3Q8TCT6 385 aa12.4□□□□□ -0.42
PTP4A2-206ENST00000489313 P2RX5Q93086 422 aa12.4□□□□□ -0.42
PTP4A2-206ENST00000489313 MSLNLQ96KJ4 702 aa12.4□□□□□ -0.42
PTP4A2-206ENST00000489313 PHOX2BQ99453 314 aa12.4□□□□□ -0.42
PTP4A2-206ENST00000489313 SMARCAD1Q9H4L7 1026 aa12.4□□□□□ -0.42
PTP4A2-206ENST00000489313 CLEC1BQ9P126 229 aa12.4□□□□□ -0.42
PTP4A2-206ENST00000489313 SEC63Q9UGP8 760 aaKnown RBP12.4□□□□□ -0.42
PTP4A2-206ENST00000489313 PCDHGC5Q9Y5F6 944 aa12.4□□□□□ -0.42
PTP4A2-206ENST00000489313 FRYLO94915 3013 aa12.4□□□□□ -0.42
PTP4A2-206ENST00000489313 INSRRP14616 1297 aa12.39□□□□□ -0.43
PTP4A2-206ENST00000489313 PDE4AP27815 886 aa12.39□□□□□ -0.43
PTP4A2-206ENST00000489313 NRIP1P48552 1158 aa12.39□□□□□ -0.43
PTP4A2-206ENST00000489313 MTMR1Q13613 665 aa12.39□□□□□ -0.43
PTP4A2-206ENST00000489313 UBE2SQ16763 222 aa12.39□□□□□ -0.43
PTP4A2-206ENST00000489313 TTC22Q5TAA0 569 aa12.39□□□□□ -0.43
PTP4A2-206ENST00000489313 RBM23Q86U06 439 aaKnown RBP12.39□□□□□ -0.43
PTP4A2-206ENST00000489313 NPAS4Q8IUM7 802 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms