RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 VAMP1P23763 118 aa4.77□□□□□ -1.65
CCDC93-209ENST00000488908 GRK2P25098 689 aa4.77□□□□□ -1.65
CCDC93-209ENST00000488908 GRK3P35626 688 aa4.77□□□□□ -1.65
CCDC93-209ENST00000488908 RRADP55042 308 aa4.77□□□□□ -1.65
CCDC93-209ENST00000488908 KRTAP15-1Q3LI76 137 aa4.77□□□□□ -1.65
CCDC93-209ENST00000488908 TNNI3KQ59H18 835 aa4.77□□□□□ -1.65
CCDC93-209ENST00000488908 LDLRAD3Q86YD5 345 aa4.77□□□□□ -1.65
CCDC93-209ENST00000488908 ZNF483Q8TF39 744 aaPredicted RBP4.77□□□□□ -1.65
CCDC93-209ENST00000488908 ZG16BQ96DA0 208 aa4.77□□□□□ -1.65
CCDC93-209ENST00000488908 SCYL1Q96KG9 808 aa4.77□□□□□ -1.65
CCDC93-209ENST00000488908 CRAMP1Q96RY5 1269 aa4.77□□□□□ -1.65
CCDC93-209ENST00000488908 PHF20Q9BVI0 1012 aa4.77□□□□□ -1.65
CCDC93-209ENST00000488908 PLA2G12BQ9BX93 195 aa4.77□□□□□ -1.65
CCDC93-209ENST00000488908 C12orf65Q9H3J6 166 aaKnown RBP4.77□□□□□ -1.65
CCDC93-209ENST00000488908 MSL2Q9HCI7 577 aa4.77□□□□□ -1.65
CCDC93-209ENST00000488908 AURKAIP1Q9NWT8 199 aaPredicted RBP4.77□□□□□ -1.65
CCDC93-209ENST00000488908 DSEQ9UL01 958 aa4.77□□□□□ -1.65
CCDC93-209ENST00000488908 SMAD7O15105 426 aaKnown RBP4.76□□□□□ -1.65
CCDC93-209ENST00000488908 CAPNS1P04632 268 aa4.76□□□□□ -1.65
CCDC93-209ENST00000488908 COL6A2P12110 1019 aa4.76□□□□□ -1.65
CCDC93-209ENST00000488908 DNAJA1P31689 397 aaKnown RBP4.76□□□□□ -1.65
CCDC93-209ENST00000488908 HIBADHP31937 336 aaKnown RBP4.76□□□□□ -1.65
CCDC93-209ENST00000488908 ETV4P43268 484 aa4.76□□□□□ -1.65
CCDC93-209ENST00000488908 EPHA5P54756 1037 aa4.76□□□□□ -1.65
CCDC93-209ENST00000488908 DUSP8Q13202 625 aa4.76□□□□□ -1.65
CCDC93-209ENST00000488908 KIZQ2M2Z5 673 aa4.76□□□□□ -1.65
CCDC93-209ENST00000488908 USP53Q70EK8 1073 aa4.76□□□□□ -1.65
CCDC93-209ENST00000488908 KCTD1Q719H9 257 aa4.76□□□□□ -1.65
CCDC93-209ENST00000488908 MRGPRGQ86SM5 289 aa4.76□□□□□ -1.65
CCDC93-209ENST00000488908 ZNF808Q8N4W9 903 aaPredicted RBP4.76□□□□□ -1.65
CCDC93-209ENST00000488908 MICAL1Q8TDZ2 1067 aa4.76□□□□□ -1.65
CCDC93-209ENST00000488908 EPN3Q9H201 632 aa4.76□□□□□ -1.65
CCDC93-209ENST00000488908 MMRN2Q9H8L6 949 aa4.76□□□□□ -1.65
CCDC93-209ENST00000488908 PUF60Q9UHX1 559 aaKnown RBP4.76□□□□□ -1.65
CCDC93-209ENST00000488908 INPP5FQ9Y2H2 1132 aa4.76□□□□□ -1.65
CCDC93-209ENST00000488908 TELO2Q9Y4R8 837 aa4.76□□□□□ -1.65
CCDC93-209ENST00000488908 GRIA2P42262 883 aa4.75□□□□□ -1.65
CCDC93-209ENST00000488908 PPP2R2AP63151 447 aa4.75□□□□□ -1.65
CCDC93-209ENST00000488908 NFYCQ13952 458 aa4.75□□□□□ -1.65
CCDC93-209ENST00000488908 NOLC1Q14978 699 aaKnown RBP eCLIP4.75□□□□□ -1.65
CCDC93-209ENST00000488908 FXNQ16595 210 aa4.75□□□□□ -1.65
CCDC93-209ENST00000488908 EEPD1Q7L9B9 569 aa4.75□□□□□ -1.65
CCDC93-209ENST00000488908 KCNJ15Q99712 375 aa4.75□□□□□ -1.65
CCDC93-209ENST00000488908 IER2Q9BTL4 223 aa4.75□□□□□ -1.65
CCDC93-209ENST00000488908 TLR9Q9NR96 1032 aa4.75□□□□□ -1.65
CCDC93-209ENST00000488908 ACOT7O00154 380 aa4.74□□□□□ -1.65
CCDC93-209ENST00000488908 MATN2O00339 956 aa4.74□□□□□ -1.65
CCDC93-209ENST00000488908 NKRFO15226 690 aaKnown RBP eCLIP4.74□□□□□ -1.65
CCDC93-209ENST00000488908 ARHGAP6O43182 974 aa4.74□□□□□ -1.65
CCDC93-209ENST00000488908 MSX2P35548 267 aaPredicted RBP4.74□□□□□ -1.65
CCDC93-209ENST00000488908 HDLBPQ00341 1268 aaKnown RBP4.74□□□□□ -1.65
CCDC93-209ENST00000488908 HHEXQ03014 270 aa4.74□□□□□ -1.65
CCDC93-209ENST00000488908 WDR72Q3MJ13 1102 aa4.74□□□□□ -1.65
CCDC93-209ENST00000488908 HABP4Q5JVS0 413 aaKnown RBP4.74□□□□□ -1.65
CCDC93-209ENST00000488908 FNDC7Q5VTL7 733 aa4.74□□□□□ -1.65
CCDC93-209ENST00000488908 MRM1Q6IN84 353 aaKnown RBP4.74□□□□□ -1.65
CCDC93-209ENST00000488908 LBX2Q6XYB7 198 aa4.74□□□□□ -1.65
CCDC93-209ENST00000488908 LARP4BQ92615 738 aaKnown RBP4.74□□□□□ -1.65
CCDC93-209ENST00000488908 ZNF703Q9H7S9 590 aaPredicted RBP4.74□□□□□ -1.65
CCDC93-209ENST00000488908 SLC39A2Q9NP94 309 aa4.74□□□□□ -1.65
CCDC93-209ENST00000488908 PCSK5Q92824 1860 aa4.73□□□□□ -1.65
CCDC93-209ENST00000488908 DLX3O60479 287 aa4.73□□□□□ -1.65
CCDC93-209ENST00000488908 HMGCRP04035 888 aa4.73□□□□□ -1.65
CCDC93-209ENST00000488908 DBPQ10586 325 aaPredicted RBP4.73□□□□□ -1.65
CCDC93-209ENST00000488908 FOXL1Q12952 345 aa4.73□□□□□ -1.65
CCDC93-209ENST00000488908 SLC10A6Q3KNW5 377 aa4.73□□□□□ -1.65
CCDC93-209ENST00000488908 DCAF4Q8WV16 495 aa4.73□□□□□ -1.65
CCDC93-209ENST00000488908 AGAP2Q99490 1192 aa4.73□□□□□ -1.65
CCDC93-209ENST00000488908 PRRX2Q99811 253 aa4.73□□□□□ -1.65
CCDC93-209ENST00000488908 ZFYVE21Q9BQ24 234 aa4.73□□□□□ -1.65
CCDC93-209ENST00000488908 ZDHHC5Q9C0B5 715 aa4.73□□□□□ -1.65
CCDC93-209ENST00000488908 TGIF2Q9GZN2 237 aa4.73□□□□□ -1.65
CCDC93-209ENST00000488908 PLA2G3Q9NZ20 509 aa4.73□□□□□ -1.65
CCDC93-209ENST00000488908 FBXO10Q9UK96 956 aa4.73□□□□□ -1.65
CCDC93-209ENST00000488908 DMRT1Q9Y5R6 373 aa4.73□□□□□ -1.65
CCDC93-209ENST00000488908 MRVI1Q9Y6F6 885 aa4.73□□□□□ -1.65
CCDC93-209ENST00000488908 RAMP2O60895 175 aa4.72□□□□□ -1.65
CCDC93-209ENST00000488908 SSBP05455 408 aaKnown RBP eCLIP4.72□□□□□ -1.65
CCDC93-209ENST00000488908 ATF4P18848 351 aaPredicted RBP4.72□□□□□ -1.65
CCDC93-209ENST00000488908 USP30Q70CQ3 517 aa4.72□□□□□ -1.65
CCDC93-209ENST00000488908 SGMS1Q86VZ5 419 aa4.72□□□□□ -1.65
CCDC93-209ENST00000488908 ACBD3Q9H3P7 528 aa4.72□□□□□ -1.65
CCDC93-209ENST00000488908 PARPBPQ9NWS1 579 aa4.72□□□□□ -1.65
CCDC93-209ENST00000488908 ARHGAP28Q9P2N2 729 aa4.72□□□□□ -1.65
CCDC93-209ENST00000488908 GIT1Q9Y2X7 761 aa4.72□□□□□ -1.65
CCDC93-209ENST00000488908 REXO2Q9Y3B8 237 aaKnown RBP4.72□□□□□ -1.65
CCDC93-209ENST00000488908 TNFRSF18Q9Y5U5 241 aa4.72□□□□□ -1.65
CCDC93-209ENST00000488908 A0A1W2PQU0 124 aa4.71□□□□□ -1.66
CCDC93-209ENST00000488908 FAM47E-STBD1D6RA91 191 aa4.71□□□□□ -1.66
CCDC93-209ENST00000488908 SOD2P04179 222 aa4.71□□□□□ -1.66
CCDC93-209ENST00000488908 KCNQ1P51787 676 aa4.71□□□□□ -1.66
CCDC93-209ENST00000488908 TBR1Q16650 682 aa4.71□□□□□ -1.66
CCDC93-209ENST00000488908 DPY19L2P1Q6NXN4 242 aa4.71□□□□□ -1.66
CCDC93-209ENST00000488908 CXXC5Q7LFL8 322 aaKnown RBP4.71□□□□□ -1.66
CCDC93-209ENST00000488908 ADGRE4PQ86SQ3 457 aa4.71□□□□□ -1.66
CCDC93-209ENST00000488908 CFHR4Q92496 578 aa4.71□□□□□ -1.66
CCDC93-209ENST00000488908 CLIP3Q96DZ5 547 aa4.71□□□□□ -1.66
CCDC93-209ENST00000488908 CD244Q9BZW8 370 aa4.71□□□□□ -1.66
CCDC93-209ENST00000488908 KIAA1683Q9H0B3 1180 aa4.71□□□□□ -1.66
CCDC93-209ENST00000488908 NELFAQ9H3P2 528 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms