RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 CFAP73A6NFT4 308 aa17.61■□□□□ 0.41
MCF2L-229ENST00000488765 RGS16O15492 202 aaPredicted RBP17.61■□□□□ 0.41
MCF2L-229ENST00000488765 KCNQ2O43526 872 aa17.61■□□□□ 0.41
MCF2L-229ENST00000488765 MCAMP43121 646 aa17.61■□□□□ 0.41
MCF2L-229ENST00000488765 RPS6KA1Q15418 735 aa17.61■□□□□ 0.41
MCF2L-229ENST00000488765 PIGWQ7Z7B1 504 aa17.61■□□□□ 0.41
MCF2L-229ENST00000488765 INPP4AQ96PE3 977 aaPredicted RBP17.61■□□□□ 0.41
MCF2L-229ENST00000488765 RTCBQ9Y3I0 505 aaKnown RBP17.61■□□□□ 0.41
MCF2L-229ENST00000488765 ZCCHC18P0CG32 403 aa17.61■□□□□ 0.41
MCF2L-229ENST00000488765 GM2AP17900 193 aa17.61■□□□□ 0.41
MCF2L-229ENST00000488765 RFX8Q6ZV50 586 aa17.61■□□□□ 0.41
MCF2L-229ENST00000488765 PREBQ9HCU5 417 aa17.61■□□□□ 0.41
MCF2L-229ENST00000488765 PIH1D3Q9NQM4 214 aaKnown RBP17.61■□□□□ 0.41
MCF2L-229ENST00000488765 WDR35Q9P2L0 1181 aa17.61■□□□□ 0.41
MCF2L-229ENST00000488765 A0A087X0T9 212 aa17.6■□□□□ 0.41
MCF2L-229ENST00000488765 FAM228BP0C875 321 aa17.6■□□□□ 0.41
MCF2L-229ENST00000488765 SP100P23497 879 aaPredicted RBP17.6■□□□□ 0.41
MCF2L-229ENST00000488765 SLC29A2Q14542 456 aa17.6■□□□□ 0.41
MCF2L-229ENST00000488765 TNIP1Q15025 636 aa17.6■□□□□ 0.41
MCF2L-229ENST00000488765 LRRC41Q15345 812 aa17.6■□□□□ 0.41
MCF2L-229ENST00000488765 MUM1Q2TAK8 710 aa17.6■□□□□ 0.41
MCF2L-229ENST00000488765 ARMC9Q7Z3E5 817 aa17.6■□□□□ 0.41
MCF2L-229ENST00000488765 ZNF654Q8IZM8 581 aa17.6■□□□□ 0.41
MCF2L-229ENST00000488765 ATXN2LQ8WWM7 1075 aaKnown RBP17.6■□□□□ 0.41
MCF2L-229ENST00000488765 FGD4Q96M96 766 aa17.6■□□□□ 0.41
MCF2L-229ENST00000488765 NUDCD1Q96RS6 583 aa17.6■□□□□ 0.41
MCF2L-229ENST00000488765 RMND1Q9NWS8 449 aa17.6■□□□□ 0.41
MCF2L-229ENST00000488765 CACNA1FO60840 1977 aa17.6■□□□□ 0.41
MCF2L-229ENST00000488765 GCLCP48506 637 aaPredicted RBP17.6■□□□□ 0.41
MCF2L-229ENST00000488765 ASIC1P78348 528 aa17.6■□□□□ 0.41
MCF2L-229ENST00000488765 LRIG3Q6UXM1 1119 aa17.6■□□□□ 0.41
MCF2L-229ENST00000488765 FBF1Q8TES7 1133 aa17.6■□□□□ 0.41
MCF2L-229ENST00000488765 FERMT2Q96AC1 680 aa17.6■□□□□ 0.41
MCF2L-229ENST00000488765 ADAM7Q9H2U9 754 aa17.6■□□□□ 0.41
MCF2L-229ENST00000488765 INTUQ9ULD6 942 aa17.6■□□□□ 0.41
MCF2L-229ENST00000488765 AFF2P51816 1311 aa17.6■□□□□ 0.41
MCF2L-229ENST00000488765 FGFR4P22455 802 aa17.6■□□□□ 0.41
MCF2L-229ENST00000488765 TARSP26639 723 aaKnown RBP17.6■□□□□ 0.41
MCF2L-229ENST00000488765 ALDH3A1P30838 453 aa17.6■□□□□ 0.41
MCF2L-229ENST00000488765 RAPGEF1Q13905 1077 aa17.6■□□□□ 0.41
MCF2L-229ENST00000488765 FOXB2Q5VYV0 432 aa17.6■□□□□ 0.41
MCF2L-229ENST00000488765 MTHFD1LQ6UB35 978 aa17.6■□□□□ 0.41
MCF2L-229ENST00000488765 LRRC15Q8TF66 581 aa17.6■□□□□ 0.41
MCF2L-229ENST00000488765 UIMC1Q96RL1 719 aa17.6■□□□□ 0.41
MCF2L-229ENST00000488765 DNAJC17Q9NVM6 304 aaKnown RBP17.6■□□□□ 0.41
MCF2L-229ENST00000488765 SNX24Q9Y343 169 aa17.6■□□□□ 0.41
MCF2L-229ENST00000488765 N4BP2Q86UW6 1770 aaPredicted RBP17.6■□□□□ 0.41
MCF2L-229ENST00000488765 SERPINB4P48594 390 aa17.59■□□□□ 0.41
MCF2L-229ENST00000488765 POLR2FP61218 127 aaKnown RBP17.59■□□□□ 0.41
MCF2L-229ENST00000488765 C1QTNF12Q5T7M4 302 aa17.59■□□□□ 0.41
MCF2L-229ENST00000488765 ZNF662Q6ZS27 426 aa17.59■□□□□ 0.41
MCF2L-229ENST00000488765 ZNF232Q9UNY5 417 aa17.59■□□□□ 0.41
MCF2L-229ENST00000488765 GRID2IPA4D2P6 1211 aa17.59■□□□□ 0.41
MCF2L-229ENST00000488765 WTIPA6NIX2 430 aaPredicted RBP17.59■□□□□ 0.41
MCF2L-229ENST00000488765 SNX3O60493 162 aa17.59■□□□□ 0.41
MCF2L-229ENST00000488765 ATP6V1G1O75348 118 aa17.59■□□□□ 0.41
MCF2L-229ENST00000488765 MBD4O95243 580 aa17.59■□□□□ 0.41
MCF2L-229ENST00000488765 GH1P01241 217 aa17.59■□□□□ 0.41
MCF2L-229ENST00000488765 UBTFL6P0CB48 400 aaPredicted RBP17.59■□□□□ 0.41
MCF2L-229ENST00000488765 NLRP5P59047 1200 aa17.59■□□□□ 0.41
MCF2L-229ENST00000488765 DYMQ7RTS9 669 aa17.59■□□□□ 0.41
MCF2L-229ENST00000488765 THAP9Q9H5L6 903 aa17.59■□□□□ 0.41
MCF2L-229ENST00000488765 HAO1Q9UJM8 370 aa17.59■□□□□ 0.41
MCF2L-229ENST00000488765 MYH7BA7E2Y1 1941 aa17.59■□□□□ 0.41
MCF2L-229ENST00000488765 UBA7P41226 1012 aa17.59■□□□□ 0.41
MCF2L-229ENST00000488765 KLC1Q07866 573 aa17.59■□□□□ 0.41
MCF2L-229ENST00000488765 RASIP1Q5U651 963 aa17.59■□□□□ 0.41
MCF2L-229ENST00000488765 FAM133AQ8N9E0 248 aa17.59■□□□□ 0.41
MCF2L-229ENST00000488765 DTX3LQ8TDB6 740 aa17.59■□□□□ 0.41
MCF2L-229ENST00000488765 P3H4Q92791 437 aa17.59■□□□□ 0.41
MCF2L-229ENST00000488765 RCN2Q14257 317 aa17.58■□□□□ 0.41
MCF2L-229ENST00000488765 RNF10Q8N5U6 811 aaKnown RBP17.58■□□□□ 0.41
MCF2L-229ENST00000488765 P2RX5Q93086 422 aa17.58■□□□□ 0.41
MCF2L-229ENST00000488765 UTP4Q969X6 686 aaKnown RBP17.58■□□□□ 0.41
MCF2L-229ENST00000488765 EPB41L4AQ9HCS5 686 aaPredicted RBP17.58■□□□□ 0.41
MCF2L-229ENST00000488765 JAG2Q9Y219 1238 aa17.58■□□□□ 0.41
MCF2L-229ENST00000488765 NOC2LQ9Y3T9 749 aaKnown RBP17.58■□□□□ 0.41
MCF2L-229ENST00000488765 PTDSS1P48651 473 aaKnown RBP17.58■□□□□ 0.4
MCF2L-229ENST00000488765 DDB1Q16531 1140 aa17.58■□□□□ 0.4
MCF2L-229ENST00000488765 NAALADL2Q58DX5 795 aa17.58■□□□□ 0.4
MCF2L-229ENST00000488765 AGBL2Q5U5Z8 902 aa17.58■□□□□ 0.4
MCF2L-229ENST00000488765 SGMS1Q86VZ5 419 aa17.58■□□□□ 0.4
MCF2L-229ENST00000488765 SEMA4AQ9H3S1 761 aa17.58■□□□□ 0.4
MCF2L-229ENST00000488765 USP15Q9Y4E8 981 aaPredicted RBP17.58■□□□□ 0.4
MCF2L-229ENST00000488765 DEUP1Q05D60 604 aa17.57■□□□□ 0.4
MCF2L-229ENST00000488765 PKN1Q16512 942 aa17.57■□□□□ 0.4
MCF2L-229ENST00000488765 IFI16Q16666 785 aaKnown RBP17.57■□□□□ 0.4
MCF2L-229ENST00000488765 ZC3H18Q86VM9 953 aaKnown RBP17.57■□□□□ 0.4
MCF2L-229ENST00000488765 IFNL3Q8IZI9 196 aa17.57■□□□□ 0.4
MCF2L-229ENST00000488765 GSTA1P08263 222 aa17.57■□□□□ 0.4
MCF2L-229ENST00000488765 PAEPP09466 180 aa17.57■□□□□ 0.4
MCF2L-229ENST00000488765 XBP1P17861 261 aa17.57■□□□□ 0.4
MCF2L-229ENST00000488765 SLMAPQ14BN4 828 aa17.57■□□□□ 0.4
MCF2L-229ENST00000488765 MEI1Q5TIA1 1274 aa17.57■□□□□ 0.4
MCF2L-229ENST00000488765 GLIS3Q8NEA6 775 aa17.57■□□□□ 0.4
MCF2L-229ENST00000488765 RUBCNQ92622 972 aa17.57■□□□□ 0.4
MCF2L-229ENST00000488765 FMO2Q99518 471 aa17.57■□□□□ 0.4
MCF2L-229ENST00000488765 RAB17Q9H0T7 212 aa17.57■□□□□ 0.4
MCF2L-229ENST00000488765 MMADHCQ9H3L0 296 aaPredicted RBP17.57■□□□□ 0.4
MCF2L-229ENST00000488765 CYP2D7A0A087X1C5 515 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms