RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 MARK3P27448 753 aa26.31■■□□□ 1.8
CUL4A-209ENST00000488558 PLPPR4Q7Z2D5 763 aa26.31■■□□□ 1.8
CUL4A-209ENST00000488558 RAD9AQ99638 391 aa26.31■■□□□ 1.8
CUL4A-209ENST00000488558 ZBED2Q9BTP6 218 aa26.31■■□□□ 1.8
CUL4A-209ENST00000488558 COL4A4P53420 1690 aaPredicted RBP26.31■■□□□ 1.8
CUL4A-209ENST00000488558 RRN3P2A6NIE6 340 aa26.3■■□□□ 1.8
CUL4A-209ENST00000488558 FAM86B1E9PN63 330 aa26.3■■□□□ 1.8
CUL4A-209ENST00000488558 ATG7O95352 703 aa26.3■■□□□ 1.8
CUL4A-209ENST00000488558 AMHP03971 560 aa26.3■■□□□ 1.8
CUL4A-209ENST00000488558 FAM86B2P0C5J1 330 aa26.3■■□□□ 1.8
CUL4A-209ENST00000488558 SLC26A2P50443 739 aa26.3■■□□□ 1.8
CUL4A-209ENST00000488558 SETQ01105 290 aaPredicted RBP26.3■■□□□ 1.8
CUL4A-209ENST00000488558 RSPH3Q86UC2 560 aa26.3■■□□□ 1.8
CUL4A-209ENST00000488558 APBB2Q92870 758 aa26.3■■□□□ 1.8
CUL4A-209ENST00000488558 ZNF274Q96GC6 653 aaPredicted RBP26.3■■□□□ 1.8
CUL4A-209ENST00000488558 SLC26A6Q9BXS9 759 aa26.3■■□□□ 1.8
CUL4A-209ENST00000488558 SH3GLB2Q9NR46 395 aa26.3■■□□□ 1.8
CUL4A-209ENST00000488558 COL4A6Q14031 1691 aa26.3■■□□□ 1.8
CUL4A-209ENST00000488558 ARHGEF15O94989 841 aa26.29■■□□□ 1.8
CUL4A-209ENST00000488558 MARCH8Q5T0T0 291 aa26.29■■□□□ 1.8
CUL4A-209ENST00000488558 RUFY4Q6ZNE9 571 aa26.29■■□□□ 1.8
CUL4A-209ENST00000488558 PLA2G4DQ86XP0 818 aa26.29■■□□□ 1.8
CUL4A-209ENST00000488558 NCOA5Q9HCD5 579 aaKnown RBP26.29■■□□□ 1.8
CUL4A-209ENST00000488558 IGKV6D-21A0A0A0MT36 114 aa26.28■■□□□ 1.8
CUL4A-209ENST00000488558 STAT5BP51692 787 aa26.28■■□□□ 1.8
CUL4A-209ENST00000488558 CCT2P78371 535 aaKnown RBP26.28■■□□□ 1.8
CUL4A-209ENST00000488558 TMCO2Q7Z6W1 182 aaPredicted RBP26.28■■□□□ 1.8
CUL4A-209ENST00000488558 TRIM22Q8IYM9 498 aa26.28■■□□□ 1.8
CUL4A-209ENST00000488558 COL25A1Q9BXS0 654 aaPredicted RBP26.28■■□□□ 1.8
CUL4A-209ENST00000488558 LCHNA4D1U4 455 aa26.27■■□□□ 1.8
CUL4A-209ENST00000488558 ADAMTS3O15072 1205 aa26.27■■□□□ 1.8
CUL4A-209ENST00000488558 INSRRP14616 1297 aa26.27■■□□□ 1.8
CUL4A-209ENST00000488558 MGAT3Q09327 533 aa26.27■■□□□ 1.8
CUL4A-209ENST00000488558 LIN28BQ6ZN17 250 aaKnown RBP eCLIP26.27■■□□□ 1.8
CUL4A-209ENST00000488558 FAM177A1Q8N128 213 aaPredicted RBP26.27■■□□□ 1.8
CUL4A-209ENST00000488558 TRPC6Q9Y210 931 aa26.27■■□□□ 1.8
CUL4A-209ENST00000488558 IPO5O00410 1097 aaKnown RBP26.26■■□□□ 1.79
CUL4A-209ENST00000488558 DHX15O43143 795 aaKnown RBP26.26■■□□□ 1.79
CUL4A-209ENST00000488558 CCNE2O96020 404 aa26.26■■□□□ 1.79
CUL4A-209ENST00000488558 CHRNA1P02708 482 aa26.26■■□□□ 1.79
CUL4A-209ENST00000488558 CIITAP33076 1130 aa26.26■■□□□ 1.79
CUL4A-209ENST00000488558 PLCB4Q15147 1175 aa26.26■■□□□ 1.79
CUL4A-209ENST00000488558 ARNTL2Q8WYA1 636 aa26.26■■□□□ 1.79
CUL4A-209ENST00000488558 IFIH1Q9BYX4 1025 aaKnown RBP26.26■■□□□ 1.79
CUL4A-209ENST00000488558 OSBPL7Q9BZF2 842 aa26.26■■□□□ 1.79
CUL4A-209ENST00000488558 UPF3BQ9BZI7 483 aaKnown RBP26.26■■□□□ 1.79
CUL4A-209ENST00000488558 CERS4Q9HA82 394 aa26.26■■□□□ 1.79
CUL4A-209ENST00000488558 TBC1D22BQ9NU19 505 aa26.26■■□□□ 1.79
CUL4A-209ENST00000488558 VPS54Q9P1Q0 977 aa26.26■■□□□ 1.79
CUL4A-209ENST00000488558 INSL6Q9Y581 213 aa26.26■■□□□ 1.79
CUL4A-209ENST00000488558 EPOPA6NHQ4 379 aa26.25■■□□□ 1.79
CUL4A-209ENST00000488558 GTPBP6O43824 516 aaPredicted RBP26.25■■□□□ 1.79
CUL4A-209ENST00000488558 HTRA4P83105 476 aaPredicted RBP26.25■■□□□ 1.79
CUL4A-209ENST00000488558 ABHD15Q6UXT9 468 aa26.25■■□□□ 1.79
CUL4A-209ENST00000488558 MYOCDQ8IZQ8 938 aa26.25■■□□□ 1.79
CUL4A-209ENST00000488558 PPM1EQ8WY54 764 aa26.25■■□□□ 1.79
CUL4A-209ENST00000488558 LINC01553A4QN01 128 aa26.24■■□□□ 1.79
CUL4A-209ENST00000488558 CPLX1O14810 134 aa26.24■■□□□ 1.79
CUL4A-209ENST00000488558 DEXIO95424 95 aa26.24■■□□□ 1.79
CUL4A-209ENST00000488558 SSRP1Q08945 709 aaKnown RBP26.24■■□□□ 1.79
CUL4A-209ENST00000488558 FAM160B1Q5W0V3 765 aa26.24■■□□□ 1.79
CUL4A-209ENST00000488558 CPLX2Q6PUV4 134 aaKnown RBP26.24■■□□□ 1.79
CUL4A-209ENST00000488558 SP7Q8TDD2 431 aaPredicted RBP26.24■■□□□ 1.79
CUL4A-209ENST00000488558 ZNF577Q9BSK1 485 aa26.24■■□□□ 1.79
CUL4A-209ENST00000488558 PDRG1Q9NUG6 133 aa26.24■■□□□ 1.79
CUL4A-209ENST00000488558 THEGQ9P2T0 379 aa26.24■■□□□ 1.79
CUL4A-209ENST00000488558 PCDHA2Q9Y5H9 948 aa26.24■■□□□ 1.79
CUL4A-209ENST00000488558 MTCH2Q9Y6C9 303 aa26.24■■□□□ 1.79
CUL4A-209ENST00000488558 POTEB3A0JP26 581 aa26.23■■□□□ 1.79
CUL4A-209ENST00000488558 ANAPC15P60006 121 aa26.23■■□□□ 1.79
CUL4A-209ENST00000488558 ERVK-21P61565 698 aa26.23■■□□□ 1.79
CUL4A-209ENST00000488558 IGBP1P78318 339 aa26.23■■□□□ 1.79
CUL4A-209ENST00000488558 ZNF746Q6NUN9 644 aaPredicted RBP26.23■■□□□ 1.79
CUL4A-209ENST00000488558 POTEBQ6S5H4 581 aa26.23■■□□□ 1.79
CUL4A-209ENST00000488558 RASGRP4Q8TDF6 673 aa26.23■■□□□ 1.79
CUL4A-209ENST00000488558 DNAJB3Q8WWF6 145 aa26.23■■□□□ 1.79
CUL4A-209ENST00000488558 ATXN2LQ8WWM7 1075 aaKnown RBP26.23■■□□□ 1.79
CUL4A-209ENST00000488558 TOP1MTQ969P6 601 aa26.23■■□□□ 1.79
CUL4A-209ENST00000488558 TGS1Q96RS0 853 aaKnown RBP26.23■■□□□ 1.79
CUL4A-209ENST00000488558 SQORQ9Y6N5 450 aa26.23■■□□□ 1.79
CUL4A-209ENST00000488558 COL1A2P08123 1366 aa26.22■■□□□ 1.79
CUL4A-209ENST00000488558 LOC101059915A0A1B0GWI6 518 aaPredicted RBP26.22■■□□□ 1.79
CUL4A-209ENST00000488558 DDX39AO00148 427 aaKnown RBP26.22■■□□□ 1.79
CUL4A-209ENST00000488558 RFXAPO00287 272 aa26.22■■□□□ 1.79
CUL4A-209ENST00000488558 PPFIA3O75145 1194 aa26.22■■□□□ 1.79
CUL4A-209ENST00000488558 GHRP10912 638 aa26.22■■□□□ 1.79
CUL4A-209ENST00000488558 MRPS6P82932 125 aaKnown RBP26.22■■□□□ 1.79
CUL4A-209ENST00000488558 LPIN1Q14693 890 aa26.22■■□□□ 1.79
CUL4A-209ENST00000488558 CCDC85BQ15834 202 aaPredicted RBP26.22■■□□□ 1.79
CUL4A-209ENST00000488558 TJAP1Q5JTD0 557 aa26.22■■□□□ 1.79
CUL4A-209ENST00000488558 MIS18BP1Q6P0N0 1132 aa26.22■■□□□ 1.79
CUL4A-209ENST00000488558 FAM117BQ6P1L5 589 aa26.22■■□□□ 1.79
CUL4A-209ENST00000488558 CCDC60Q8IWA6 550 aaPredicted RBP26.22■■□□□ 1.79
CUL4A-209ENST00000488558 SMAP1Q8IYB5 467 aaPredicted RBP26.22■■□□□ 1.79
CUL4A-209ENST00000488558 ATP8B4Q8TF62 1192 aa26.22■■□□□ 1.79
CUL4A-209ENST00000488558 SYMPKQ92797 1274 aaKnown RBP26.22■■□□□ 1.79
CUL4A-209ENST00000488558 LENG9Q96B70 501 aa26.22■■□□□ 1.79
CUL4A-209ENST00000488558 C22orf23Q9BZE7 217 aa26.22■■□□□ 1.79
CUL4A-209ENST00000488558 BACH1O14867 736 aa26.21■■□□□ 1.79
CUL4A-209ENST00000488558 HBP1O60381 514 aa26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms