RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 SCG2P13521 617 aa25.78■■□□□ 1.72
PTPN4-211ENST00000488279 RUFY4Q6ZNE9 571 aa25.78■■□□□ 1.72
PTPN4-211ENST00000488279 IL27Q8NEV9 243 aa25.78■■□□□ 1.72
PTPN4-211ENST00000488279 IFIH1Q9BYX4 1025 aaKnown RBP25.78■■□□□ 1.72
PTPN4-211ENST00000488279 MTUS1Q9ULD2 1270 aa25.78■■□□□ 1.72
PTPN4-211ENST00000488279 MUC3AQ02505 3323 aa25.78■■□□□ 1.72
PTPN4-211ENST00000488279 MBLAC1A4D2B0 266 aaPredicted RBP25.77■■□□□ 1.72
PTPN4-211ENST00000488279 RRN3P2A6NIE6 340 aa25.77■■□□□ 1.72
PTPN4-211ENST00000488279 LPXNO60711 386 aa25.77■■□□□ 1.72
PTPN4-211ENST00000488279 RPS6KB1P23443 525 aa25.77■■□□□ 1.72
PTPN4-211ENST00000488279 ACTR2P61160 394 aa25.77■■□□□ 1.72
PTPN4-211ENST00000488279 HTRA4P83105 476 aaPredicted RBP25.77■■□□□ 1.72
PTPN4-211ENST00000488279 JAKMIP3Q5VZ66 844 aa25.77■■□□□ 1.72
PTPN4-211ENST00000488279 CCDC12Q8WUD4 166 aaPredicted RBP25.77■■□□□ 1.72
PTPN4-211ENST00000488279 TOP1MTQ969P6 601 aa25.77■■□□□ 1.72
PTPN4-211ENST00000488279 PCYT2Q99447 389 aa25.77■■□□□ 1.72
PTPN4-211ENST00000488279 SUGCTQ9HAC7 445 aa25.77■■□□□ 1.72
PTPN4-211ENST00000488279 LMCD1Q9NZU5 365 aa25.77■■□□□ 1.72
PTPN4-211ENST00000488279 PRPF3O43395 683 aaKnown RBP25.76■■□□□ 1.71
PTPN4-211ENST00000488279 INSRRP14616 1297 aa25.76■■□□□ 1.71
PTPN4-211ENST00000488279 IGBP1P78318 339 aa25.76■■□□□ 1.71
PTPN4-211ENST00000488279 AAK1Q2M2I8 961 aa25.76■■□□□ 1.71
PTPN4-211ENST00000488279 MARCH8Q5T0T0 291 aa25.76■■□□□ 1.71
PTPN4-211ENST00000488279 NIPA1Q7RTP0 329 aa25.76■■□□□ 1.71
PTPN4-211ENST00000488279 PLPPR4Q7Z2D5 763 aa25.76■■□□□ 1.71
PTPN4-211ENST00000488279 C6orf50Q9HD87 102 aa25.76■■□□□ 1.71
PTPN4-211ENST00000488279 UPP2O95045 317 aa25.75■■□□□ 1.71
PTPN4-211ENST00000488279 RPLP2P05387 115 aaKnown RBP25.75■■□□□ 1.71
PTPN4-211ENST00000488279 STAT5BP51692 787 aa25.75■■□□□ 1.71
PTPN4-211ENST00000488279 AKAP17AQ02040 695 aaKnown RBP25.75■■□□□ 1.71
PTPN4-211ENST00000488279 ITGB3BPQ13352 177 aaPredicted RBP25.75■■□□□ 1.71
PTPN4-211ENST00000488279 MCTP2Q6DN12 878 aa25.75■■□□□ 1.71
PTPN4-211ENST00000488279 DNAJB3Q8WWF6 145 aa25.75■■□□□ 1.71
PTPN4-211ENST00000488279 AGXT2Q9BYV1 514 aa25.75■■□□□ 1.71
PTPN4-211ENST00000488279 ZMYND12Q9H0C1 365 aa25.75■■□□□ 1.71
PTPN4-211ENST00000488279 TRPC6Q9Y210 931 aa25.75■■□□□ 1.71
PTPN4-211ENST00000488279 TTC28Q96AY4 2481 aa25.75■■□□□ 1.71
PTPN4-211ENST00000488279 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.74■■□□□ 1.71
PTPN4-211ENST00000488279 ESYT2A0FGR8 921 aa25.74■■□□□ 1.71
PTPN4-211ENST00000488279 GDPD5Q8WTR4 605 aa25.74■■□□□ 1.71
PTPN4-211ENST00000488279 YME1L1Q96TA2 773 aa25.74■■□□□ 1.71
PTPN4-211ENST00000488279 PTPRSQ13332 1948 aa25.74■■□□□ 1.71
PTPN4-211ENST00000488279 PRRC2BQ5JSZ5 2229 aaKnown RBP25.73■■□□□ 1.71
PTPN4-211ENST00000488279 ATG7O95352 703 aa25.73■■□□□ 1.71
PTPN4-211ENST00000488279 GHRP10912 638 aa25.73■■□□□ 1.71
PTPN4-211ENST00000488279 GNA11P29992 359 aa25.73■■□□□ 1.71
PTPN4-211ENST00000488279 TFF2Q03403 129 aa25.73■■□□□ 1.71
PTPN4-211ENST00000488279 MGAT3Q09327 533 aa25.73■■□□□ 1.71
PTPN4-211ENST00000488279 PKN1Q16512 942 aa25.73■■□□□ 1.71
PTPN4-211ENST00000488279 PLA2G4DQ86XP0 818 aa25.73■■□□□ 1.71
PTPN4-211ENST00000488279 SP7Q8TDD2 431 aaPredicted RBP25.73■■□□□ 1.71
PTPN4-211ENST00000488279 ADAMTS19Q8TE59 1207 aa25.73■■□□□ 1.71
PTPN4-211ENST00000488279 PHKBQ93100 1093 aa25.73■■□□□ 1.71
PTPN4-211ENST00000488279 COG5Q9UP83 839 aa25.73■■□□□ 1.71
PTPN4-211ENST00000488279 NID2Q14112 1375 aa25.72■■□□□ 1.71
PTPN4-211ENST00000488279 FAM86B1E9PN63 330 aa25.72■■□□□ 1.71
PTPN4-211ENST00000488279 TNFRSF10AO00220 468 aa25.72■■□□□ 1.71
PTPN4-211ENST00000488279 EPB41L2O43491 1005 aaKnown RBP25.72■■□□□ 1.71
PTPN4-211ENST00000488279 CYP3A4P08684 503 aa25.72■■□□□ 1.71
PTPN4-211ENST00000488279 FAM86B2P0C5J1 330 aa25.72■■□□□ 1.71
PTPN4-211ENST00000488279 SLC26A2P50443 739 aa25.72■■□□□ 1.71
PTPN4-211ENST00000488279 LPIN1Q14693 890 aa25.72■■□□□ 1.71
PTPN4-211ENST00000488279 PLCB4Q15147 1175 aa25.72■■□□□ 1.71
PTPN4-211ENST00000488279 IER5Q5VY09 327 aa25.72■■□□□ 1.71
PTPN4-211ENST00000488279 REXO1Q8N1G1 1221 aaKnown RBP25.72■■□□□ 1.71
PTPN4-211ENST00000488279 C17orf80Q9BSJ5 609 aa25.72■■□□□ 1.71
PTPN4-211ENST00000488279 CDY2AQ9Y6F7 541 aa25.72■■□□□ 1.71
PTPN4-211ENST00000488279 POTEB3A0JP26 581 aa25.71■■□□□ 1.71
PTPN4-211ENST00000488279 MRPS6P82932 125 aaKnown RBP25.71■■□□□ 1.71
PTPN4-211ENST00000488279 POTEBQ6S5H4 581 aa25.71■■□□□ 1.71
PTPN4-211ENST00000488279 FBXO22Q8NEZ5 403 aa25.71■■□□□ 1.71
PTPN4-211ENST00000488279 CRYGNQ8WXF5 182 aa25.71■■□□□ 1.71
PTPN4-211ENST00000488279 HLA-CQ95604 372 aa25.71■■□□□ 1.71
PTPN4-211ENST00000488279 FAM49AQ9H0Q0 323 aaPredicted RBP25.71■■□□□ 1.71
PTPN4-211ENST00000488279 PCDHA2Q9Y5H9 948 aa25.71■■□□□ 1.71
PTPN4-211ENST00000488279 KAT6AQ92794 2004 aa25.7■■□□□ 1.7
PTPN4-211ENST00000488279 DDX39AO00148 427 aaKnown RBP25.7■■□□□ 1.7
PTPN4-211ENST00000488279 BACH1O14867 736 aa25.7■■□□□ 1.7
PTPN4-211ENST00000488279 CCNE2O96020 404 aa25.7■■□□□ 1.7
PTPN4-211ENST00000488279 PDIA3P30101 505 aaKnown RBP25.7■■□□□ 1.7
PTPN4-211ENST00000488279 EVCP57679 992 aa25.7■■□□□ 1.7
PTPN4-211ENST00000488279 NTRK3Q16288 839 aa25.7■■□□□ 1.7
PTPN4-211ENST00000488279 FBXO47Q5MNV8 452 aa25.7■■□□□ 1.7
PTPN4-211ENST00000488279 ABHD15Q6UXT9 468 aa25.7■■□□□ 1.7
PTPN4-211ENST00000488279 RUFY3Q7L099 469 aa25.7■■□□□ 1.7
PTPN4-211ENST00000488279 BICD2Q8TD16 824 aa25.7■■□□□ 1.7
PTPN4-211ENST00000488279 ZBTB10Q96DT7 871 aa25.7■■□□□ 1.7
PTPN4-211ENST00000488279 SAMD11Q96NU1 681 aa25.7■■□□□ 1.7
PTPN4-211ENST00000488279 SLC26A6Q9BXS9 759 aa25.7■■□□□ 1.7
PTPN4-211ENST00000488279 RNF26Q9BY78 433 aaPredicted RBP25.7■■□□□ 1.7
PTPN4-211ENST00000488279 IGLV3-22A0A075B6J6 115 aa25.69■■□□□ 1.7
PTPN4-211ENST00000488279 IGKV6D-21A0A0A0MT36 114 aa25.69■■□□□ 1.7
PTPN4-211ENST00000488279 M0QZ92 97 aa25.69■■□□□ 1.7
PTPN4-211ENST00000488279 IPO5O00410 1097 aaKnown RBP25.69■■□□□ 1.7
PTPN4-211ENST00000488279 BMP1P13497 986 aa25.69■■□□□ 1.7
PTPN4-211ENST00000488279 FAM160B1Q5W0V3 765 aa25.69■■□□□ 1.7
PTPN4-211ENST00000488279 TSHZ1Q6ZSZ6 1077 aa25.69■■□□□ 1.7
PTPN4-211ENST00000488279 UHRF1Q96T88 793 aaPredicted RBP25.69■■□□□ 1.7
PTPN4-211ENST00000488279 ZNF577Q9BSK1 485 aa25.69■■□□□ 1.7
PTPN4-211ENST00000488279 ZSWIM6Q9HCJ5 1215 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms