RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 TAF6LQ9Y6J9 622 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 TMEM131LA2VDJ0 1609 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 AKAP12Q02952 1782 aa5.28□□□□□ -1.56
CDC42BPA-213ENST00000488131 WDR17Q8IZU2 1322 aa5.27□□□□□ -1.57
CDC42BPA-213ENST00000488131 DIP2AQ14689 1571 aa5.27□□□□□ -1.57
CDC42BPA-213ENST00000488131 ABLIM1O14639 778 aa5.27□□□□□ -1.57
CDC42BPA-213ENST00000488131 SPTLC2O15270 562 aa5.27□□□□□ -1.57
CDC42BPA-213ENST00000488131 SURF6O75683 361 aaKnown RBP5.27□□□□□ -1.57
CDC42BPA-213ENST00000488131 SASH1O94885 1247 aa5.27□□□□□ -1.57
CDC42BPA-213ENST00000488131 ATP6V1G2O95670 118 aa5.27□□□□□ -1.57
CDC42BPA-213ENST00000488131 FERP16591 822 aa5.27□□□□□ -1.57
CDC42BPA-213ENST00000488131 ST13P50502 369 aaKnown RBP5.27□□□□□ -1.57
CDC42BPA-213ENST00000488131 EPHB4P54760 987 aa5.27□□□□□ -1.57
CDC42BPA-213ENST00000488131 GPLD1P80108 840 aa5.27□□□□□ -1.57
CDC42BPA-213ENST00000488131 AKAP17AQ02040 695 aaKnown RBP5.27□□□□□ -1.57
CDC42BPA-213ENST00000488131 STK3Q13188 491 aa5.27□□□□□ -1.57
CDC42BPA-213ENST00000488131 G3BP1Q13283 466 aaKnown RBP eCLIP5.27□□□□□ -1.57
CDC42BPA-213ENST00000488131 NMIQ13287 307 aaPredicted RBP5.27□□□□□ -1.57
CDC42BPA-213ENST00000488131 BLMHQ13867 455 aa5.27□□□□□ -1.57
CDC42BPA-213ENST00000488131 STK38Q15208 465 aa5.27□□□□□ -1.57
CDC42BPA-213ENST00000488131 IQCEQ6IPM2 695 aa5.27□□□□□ -1.57
CDC42BPA-213ENST00000488131 SLC30A9Q6PML9 568 aa5.27□□□□□ -1.57
CDC42BPA-213ENST00000488131 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.27□□□□□ -1.57
CDC42BPA-213ENST00000488131 CCDC121Q6ZUS5 278 aa5.27□□□□□ -1.57
CDC42BPA-213ENST00000488131 APTXQ7Z2E3 356 aaKnown RBP5.27□□□□□ -1.57
CDC42BPA-213ENST00000488131 ARMC9Q7Z3E5 817 aa5.27□□□□□ -1.57
CDC42BPA-213ENST00000488131 PPP1R42Q7Z4L9 355 aa5.27□□□□□ -1.57
CDC42BPA-213ENST00000488131 SDCCAG8Q86SQ7 713 aaPredicted RBP5.27□□□□□ -1.57
CDC42BPA-213ENST00000488131 TRIM74Q86UV6 250 aa5.27□□□□□ -1.57
CDC42BPA-213ENST00000488131 TRIM73Q86UV7 250 aa5.27□□□□□ -1.57
CDC42BPA-213ENST00000488131 NLRP14Q86W24 1093 aa5.27□□□□□ -1.57
CDC42BPA-213ENST00000488131 TMTC1Q8IUR5 882 aa5.27□□□□□ -1.57
CDC42BPA-213ENST00000488131 CNGA4Q8IV77 575 aa5.27□□□□□ -1.57
CDC42BPA-213ENST00000488131 CD302Q8IX05 232 aa5.27□□□□□ -1.57
CDC42BPA-213ENST00000488131 CCDC170Q8IYT3 715 aa5.27□□□□□ -1.57
CDC42BPA-213ENST00000488131 RPUSD2Q8IZ73 545 aaKnown RBP5.27□□□□□ -1.57
CDC42BPA-213ENST00000488131 TRIM58Q8NG06 486 aa5.27□□□□□ -1.57
CDC42BPA-213ENST00000488131 NXPE3Q969Y0 559 aa5.27□□□□□ -1.57
CDC42BPA-213ENST00000488131 TRIM11Q96F44 468 aa5.27□□□□□ -1.57
CDC42BPA-213ENST00000488131 CCDC114Q96M63 670 aa5.27□□□□□ -1.57
CDC42BPA-213ENST00000488131 TCEANC2Q96MN5 208 aa5.27□□□□□ -1.57
CDC42BPA-213ENST00000488131 ANKRD27Q96NW4 1050 aa5.27□□□□□ -1.57
CDC42BPA-213ENST00000488131 SPAG5Q96R06 1193 aa5.27□□□□□ -1.57
CDC42BPA-213ENST00000488131 CDC5LQ99459 802 aaKnown RBP5.27□□□□□ -1.57
CDC42BPA-213ENST00000488131 MDFIQ99750 246 aa5.27□□□□□ -1.57
CDC42BPA-213ENST00000488131 TINF2Q9BSI4 451 aa5.27□□□□□ -1.57
CDC42BPA-213ENST00000488131 MOV10L1Q9BXT6 1211 aaKnown RBP5.27□□□□□ -1.57
CDC42BPA-213ENST00000488131 TGIF2Q9GZN2 237 aa5.27□□□□□ -1.57
CDC42BPA-213ENST00000488131 IGFLR1Q9H665 355 aa5.27□□□□□ -1.57
CDC42BPA-213ENST00000488131 CHCHD3Q9NX63 227 aaKnown RBP5.27□□□□□ -1.57
CDC42BPA-213ENST00000488131 DNAJB12Q9NXW2 375 aaKnown RBP5.27□□□□□ -1.57
CDC42BPA-213ENST00000488131 MYO5BQ9ULV0 1848 aa5.27□□□□□ -1.57
CDC42BPA-213ENST00000488131 A0A0D9SFI3 127 aa5.26□□□□□ -1.57
CDC42BPA-213ENST00000488131 A0A0U1RQJ8 604 aa5.26□□□□□ -1.57
CDC42BPA-213ENST00000488131 ANO9A1A5B4 782 aa5.26□□□□□ -1.57
CDC42BPA-213ENST00000488131 FRMD3A2A2Y4 597 aa5.26□□□□□ -1.57
CDC42BPA-213ENST00000488131 FBXO24O75426 580 aa5.26□□□□□ -1.57
CDC42BPA-213ENST00000488131 SKAP2O75563 359 aaPredicted RBP5.26□□□□□ -1.57
CDC42BPA-213ENST00000488131 LUC7L3O95232 432 aaKnown RBP5.26□□□□□ -1.57
CDC42BPA-213ENST00000488131 HMGB1P09429 215 aaKnown RBP5.26□□□□□ -1.57
CDC42BPA-213ENST00000488131 PAEPP09466 180 aa5.26□□□□□ -1.57
CDC42BPA-213ENST00000488131 FAM163BP0C2L3 166 aa5.26□□□□□ -1.57
CDC42BPA-213ENST00000488131 SETSIPP0DME0 302 aa5.26□□□□□ -1.57
CDC42BPA-213ENST00000488131 ALADP13716 330 aa5.26□□□□□ -1.57
CDC42BPA-213ENST00000488131 GSTT1P30711 240 aa5.26□□□□□ -1.57
CDC42BPA-213ENST00000488131 OS9Q13438 667 aaPredicted RBP5.26□□□□□ -1.57
CDC42BPA-213ENST00000488131 SKIDA1Q1XH10 827 aa5.26□□□□□ -1.57
CDC42BPA-213ENST00000488131 CCDC38Q502W7 563 aa5.26□□□□□ -1.57
CDC42BPA-213ENST00000488131 GLE1Q53GS7 698 aaKnown RBP5.26□□□□□ -1.57
CDC42BPA-213ENST00000488131 NT5DC1Q5TFE4 455 aa5.26□□□□□ -1.57
CDC42BPA-213ENST00000488131 PPP4R3AQ6IN85 833 aa5.26□□□□□ -1.57
CDC42BPA-213ENST00000488131 SYNE3Q6ZMZ3 975 aa5.26□□□□□ -1.57
CDC42BPA-213ENST00000488131 ERMP1Q7Z2K6 904 aa5.26□□□□□ -1.57
CDC42BPA-213ENST00000488131 SPATA21Q7Z572 469 aa5.26□□□□□ -1.57
CDC42BPA-213ENST00000488131 FBXL16Q8N461 479 aa5.26□□□□□ -1.57
CDC42BPA-213ENST00000488131 MMGT1Q8N4V1 131 aa5.26□□□□□ -1.57
CDC42BPA-213ENST00000488131 MREGQ8N565 214 aa5.26□□□□□ -1.57
CDC42BPA-213ENST00000488131 PDILTQ8N807 584 aa5.26□□□□□ -1.57
CDC42BPA-213ENST00000488131 ZNF513Q8N8E2 541 aaPredicted RBP5.26□□□□□ -1.57
CDC42BPA-213ENST00000488131 TRIML1Q8N9V2 468 aa5.26□□□□□ -1.57
CDC42BPA-213ENST00000488131 MLKLQ8NB16 471 aa5.26□□□□□ -1.57
CDC42BPA-213ENST00000488131 DDX54Q8TDD1 881 aaKnown RBP5.26□□□□□ -1.57
CDC42BPA-213ENST00000488131 NSMCE1Q8WV22 266 aa5.26□□□□□ -1.57
CDC42BPA-213ENST00000488131 ATRIPQ8WXE1 791 aa5.26□□□□□ -1.57
CDC42BPA-213ENST00000488131 CUL5Q93034 780 aa5.26□□□□□ -1.57
CDC42BPA-213ENST00000488131 NEK1Q96PY6 1258 aa5.26□□□□□ -1.57
CDC42BPA-213ENST00000488131 ALS2CR12Q96Q35 445 aa5.26□□□□□ -1.57
CDC42BPA-213ENST00000488131 CCT8L2Q96SF2 557 aa5.26□□□□□ -1.57
CDC42BPA-213ENST00000488131 NUP58Q9BVL2 599 aa5.26□□□□□ -1.57
CDC42BPA-213ENST00000488131 NOD2Q9HC29 1040 aa5.26□□□□□ -1.57
CDC42BPA-213ENST00000488131 HOOK1Q9UJC3 728 aaKnown RBP5.26□□□□□ -1.57
CDC42BPA-213ENST00000488131 NAGPAQ9UK23 515 aa5.26□□□□□ -1.57
CDC42BPA-213ENST00000488131 PCDHGC5Q9Y5F6 944 aa5.26□□□□□ -1.57
CDC42BPA-213ENST00000488131 SIGLEC1Q9BZZ2 1709 aa5.26□□□□□ -1.57
CDC42BPA-213ENST00000488131 PARP4Q9UKK3 1724 aaKnown RBP5.26□□□□□ -1.57
CDC42BPA-213ENST00000488131 ZMYM6O95789 1325 aa5.26□□□□□ -1.57
CDC42BPA-213ENST00000488131 KIDINS220Q9ULH0 1771 aa5.26□□□□□ -1.57
CDC42BPA-213ENST00000488131 MYO5AQ9Y4I1 1855 aaKnown RBP5.26□□□□□ -1.57
CDC42BPA-213ENST00000488131 FMN2Q9NZ56 1722 aa5.26□□□□□ -1.57
CDC42BPA-213ENST00000488131 POGZQ7Z3K3 1410 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms