RNA–Protein interactions for RNA: ENST00000488016.1

NECTIN3-209, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 3

Gene NECTIN3, Length 829 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-209ENST00000488016 UBXN2AP68543 259 aa9.04□□□□□ -0.96
NECTIN3-209ENST00000488016 SART3Q15020 963 aaKnown RBP9.04□□□□□ -0.96
NECTIN3-209ENST00000488016 TMEM63BQ5T3F8 832 aa9.04□□□□□ -0.96
NECTIN3-209ENST00000488016 GPATCH4Q5T3I0 446 aaKnown RBP9.04□□□□□ -0.96
NECTIN3-209ENST00000488016 MAP3K21Q5TCX8 1036 aa9.04□□□□□ -0.96
NECTIN3-209ENST00000488016 C1orf229Q6ZS94 237 aaPredicted RBP9.04□□□□□ -0.96
NECTIN3-209ENST00000488016 DHX32Q7L7V1 743 aaKnown RBP9.04□□□□□ -0.96
NECTIN3-209ENST00000488016 CATIPQ7Z7H3 387 aa9.04□□□□□ -0.96
NECTIN3-209ENST00000488016 DIS3LQ8TF46 1054 aaKnown RBP9.04□□□□□ -0.96
NECTIN3-209ENST00000488016 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.04□□□□□ -0.96
NECTIN3-209ENST00000488016 MKL2Q9ULH7 1088 aa9.04□□□□□ -0.96
NECTIN3-209ENST00000488016 NAP1L2Q9ULW6 460 aaPredicted RBP9.04□□□□□ -0.96
NECTIN3-209ENST00000488016 MAFBQ9Y5Q3 323 aaPredicted RBP9.04□□□□□ -0.96
NECTIN3-209ENST00000488016 RBBP6Q7Z6E9 1792 aaKnown RBP9.04□□□□□ -0.96
NECTIN3-209ENST00000488016 MYH6P13533 1939 aa9.03□□□□□ -0.96
NECTIN3-209ENST00000488016 DNAJC25-GNG10A0A024R161 153 aa9.03□□□□□ -0.96
NECTIN3-209ENST00000488016 KLF18A0A0U1RQI7 1052 aa9.03□□□□□ -0.96
NECTIN3-209ENST00000488016 PTPDC1A2A3K4 754 aa9.03□□□□□ -0.96
NECTIN3-209ENST00000488016 EML1O00423 815 aa9.03□□□□□ -0.96
NECTIN3-209ENST00000488016 XRCC5P13010 732 aaKnown RBP9.03□□□□□ -0.96
NECTIN3-209ENST00000488016 CYBAP13498 195 aa9.03□□□□□ -0.96
NECTIN3-209ENST00000488016 RPS6KB1P23443 525 aa9.03□□□□□ -0.96
NECTIN3-209ENST00000488016 CALML3P27482 149 aa9.03□□□□□ -0.96
NECTIN3-209ENST00000488016 ADH6P28332 368 aa9.03□□□□□ -0.96
NECTIN3-209ENST00000488016 CNGA1P29973 690 aa9.03□□□□□ -0.96
NECTIN3-209ENST00000488016 CDC27P30260 824 aa9.03□□□□□ -0.96
NECTIN3-209ENST00000488016 BAATQ14032 418 aaPredicted RBP9.03□□□□□ -0.96
NECTIN3-209ENST00000488016 BLOC1S2Q6QNY1 142 aa9.03□□□□□ -0.96
NECTIN3-209ENST00000488016 SRBD1Q8N5C6 995 aaKnown RBP9.03□□□□□ -0.96
NECTIN3-209ENST00000488016 CHST13Q8NET6 341 aa9.03□□□□□ -0.96
NECTIN3-209ENST00000488016 U2AF1L4Q8WU68 220 aaKnown RBP9.03□□□□□ -0.96
NECTIN3-209ENST00000488016 BRF1Q92994 677 aa9.03□□□□□ -0.96
NECTIN3-209ENST00000488016 DDX11Q96FC9 970 aa9.03□□□□□ -0.96
NECTIN3-209ENST00000488016 TMEM87BQ96K49 555 aa9.03□□□□□ -0.96
NECTIN3-209ENST00000488016 TSPAN10Q9H1Z9 355 aaPredicted RBP9.03□□□□□ -0.96
NECTIN3-209ENST00000488016 PAK6Q9NQU5 681 aaPredicted RBP9.03□□□□□ -0.96
NECTIN3-209ENST00000488016 COL20A1Q9P218 1284 aa9.03□□□□□ -0.96
NECTIN3-209ENST00000488016 SLC12A7Q9Y666 1083 aa9.03□□□□□ -0.96
NECTIN3-209ENST00000488016 FRMPD3Q5JV73 1810 aa9.03□□□□□ -0.96
NECTIN3-209ENST00000488016 LRRC37A2A6NM11 1700 aa9.02□□□□□ -0.96
NECTIN3-209ENST00000488016 LAMA3Q16787 3333 aa9.02□□□□□ -0.97
NECTIN3-209ENST00000488016 DNAH12Q6ZR08 3092 aa9.02□□□□□ -0.97
NECTIN3-209ENST00000488016 UNC80Q8N2C7 3258 aa9.02□□□□□ -0.97
NECTIN3-209ENST00000488016 SFI1A8K8P3 1242 aa9.02□□□□□ -0.97
NECTIN3-209ENST00000488016 OPLAHO14841 1288 aa9.02□□□□□ -0.97
NECTIN3-209ENST00000488016 ADCY6O43306 1168 aa9.02□□□□□ -0.97
NECTIN3-209ENST00000488016 STRNO43815 780 aa9.02□□□□□ -0.97
NECTIN3-209ENST00000488016 DDAH1O94760 285 aa9.02□□□□□ -0.97
NECTIN3-209ENST00000488016 SNAI1O95863 264 aaPredicted RBP9.02□□□□□ -0.97
NECTIN3-209ENST00000488016 LIFRP42702 1097 aa9.02□□□□□ -0.97
NECTIN3-209ENST00000488016 NT5C2P49902 561 aa9.02□□□□□ -0.97
NECTIN3-209ENST00000488016 LAMC2Q13753 1193 aa9.02□□□□□ -0.97
NECTIN3-209ENST00000488016 TOB2Q14106 344 aaPredicted RBP9.02□□□□□ -0.97
NECTIN3-209ENST00000488016 KRT32Q14532 448 aa9.02□□□□□ -0.97
NECTIN3-209ENST00000488016 MFSD14CQ5VZR4 134 aa9.02□□□□□ -0.97
NECTIN3-209ENST00000488016 APOA5Q6Q788 366 aa9.02□□□□□ -0.97
NECTIN3-209ENST00000488016 LRRC69Q6ZNQ3 347 aa9.02□□□□□ -0.97
NECTIN3-209ENST00000488016 NOL8Q76FK4 1167 aaKnown RBP9.02□□□□□ -0.97
NECTIN3-209ENST00000488016 EEPD1Q7L9B9 569 aa9.02□□□□□ -0.97
NECTIN3-209ENST00000488016 ABRAQ8N0Z2 381 aa9.02□□□□□ -0.97
NECTIN3-209ENST00000488016 FAM133AQ8N9E0 248 aa9.02□□□□□ -0.97
NECTIN3-209ENST00000488016 CTCFLQ8NI51 663 aaPredicted RBP9.02□□□□□ -0.97
NECTIN3-209ENST00000488016 MTMR8Q96EF0 704 aa9.02□□□□□ -0.97
NECTIN3-209ENST00000488016 TINF2Q9BSI4 451 aa9.02□□□□□ -0.97
NECTIN3-209ENST00000488016 RIOX1Q9H6W3 641 aa9.02□□□□□ -0.97
NECTIN3-209ENST00000488016 AVENQ9NQS1 362 aaPredicted RBP9.02□□□□□ -0.97
NECTIN3-209ENST00000488016 CYP39A1Q9NYL5 469 aa9.02□□□□□ -0.97
NECTIN3-209ENST00000488016 MARK1Q9P0L2 795 aa9.02□□□□□ -0.97
NECTIN3-209ENST00000488016 RPTORQ8N122 1335 aa9.02□□□□□ -0.97
NECTIN3-209ENST00000488016 WDR19Q8NEZ3 1342 aa9.02□□□□□ -0.97
NECTIN3-209ENST00000488016 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.01□□□□□ -0.97
NECTIN3-209ENST00000488016 GOLGA8AA7E2F4 631 aa9.01□□□□□ -0.97
NECTIN3-209ENST00000488016 GOLGA8BA8MQT2 603 aa9.01□□□□□ -0.97
NECTIN3-209ENST00000488016 ZBTB5O15062 677 aa9.01□□□□□ -0.97
NECTIN3-209ENST00000488016 SGPL1O95470 568 aa9.01□□□□□ -0.97
NECTIN3-209ENST00000488016 IGHA1P01876 353 aa9.01□□□□□ -0.97
NECTIN3-209ENST00000488016 GJB1P08034 283 aa9.01□□□□□ -0.97
NECTIN3-209ENST00000488016 ZNF865P0CJ78 1059 aaPredicted RBP9.01□□□□□ -0.97
NECTIN3-209ENST00000488016 EPXP11678 715 aa9.01□□□□□ -0.97
NECTIN3-209ENST00000488016 HOXA13P31271 388 aaPredicted RBP9.01□□□□□ -0.97
NECTIN3-209ENST00000488016 COPB2P35606 906 aa9.01□□□□□ -0.97
NECTIN3-209ENST00000488016 RPS6P62753 249 aaKnown RBP9.01□□□□□ -0.97
NECTIN3-209ENST00000488016 SNRPNP63162 240 aaKnown RBP9.01□□□□□ -0.97
NECTIN3-209ENST00000488016 CCT2P78371 535 aaKnown RBP9.01□□□□□ -0.97
NECTIN3-209ENST00000488016 FGD1P98174 961 aa9.01□□□□□ -0.97
NECTIN3-209ENST00000488016 TKFCQ3LXA3 575 aa9.01□□□□□ -0.97
NECTIN3-209ENST00000488016 OLFML2BQ68BL8 750 aa9.01□□□□□ -0.97
NECTIN3-209ENST00000488016 TMTC3Q6ZXV5 915 aa9.01□□□□□ -0.97
NECTIN3-209ENST00000488016 ARMCX2Q7L311 632 aa9.01□□□□□ -0.97
NECTIN3-209ENST00000488016 SGMS1Q86VZ5 419 aa9.01□□□□□ -0.97
NECTIN3-209ENST00000488016 FBXO11Q86XK2 927 aa9.01□□□□□ -0.97
NECTIN3-209ENST00000488016 FBXO16Q8IX29 292 aaPredicted RBP9.01□□□□□ -0.97
NECTIN3-209ENST00000488016 TSEN2Q8NCE0 465 aaKnown RBP9.01□□□□□ -0.97
NECTIN3-209ENST00000488016 NCOA5Q9HCD5 579 aaKnown RBP9.01□□□□□ -0.97
NECTIN3-209ENST00000488016 FBXO40Q9UH90 709 aa9.01□□□□□ -0.97
NECTIN3-209ENST00000488016 ZHX1Q9UKY1 873 aaPredicted RBP9.01□□□□□ -0.97
NECTIN3-209ENST00000488016 MYADML2A6NDP7 307 aa9□□□□□ -0.97
NECTIN3-209ENST00000488016 RBAK-RBAKDNI3L0D1 243 aa9□□□□□ -0.97
NECTIN3-209ENST00000488016 PIK3R2O00459 728 aa9□□□□□ -0.97
NECTIN3-209ENST00000488016 SOX1O00570 391 aaPredicted RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms