RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 DGKDQ16760 1214 aa12.36□□□□□ -0.43
HDLBP-242ENST00000488013 ABHD15Q6UXT9 468 aa12.36□□□□□ -0.43
HDLBP-242ENST00000488013 PLPPR4Q7Z2D5 763 aa12.36□□□□□ -0.43
HDLBP-242ENST00000488013 CATSPER3Q86XQ3 398 aa12.36□□□□□ -0.43
HDLBP-242ENST00000488013 C4orf19Q8IY42 314 aa12.36□□□□□ -0.43
HDLBP-242ENST00000488013 EXOC8Q8IYI6 725 aa12.36□□□□□ -0.43
HDLBP-242ENST00000488013 FMR1NBQ8N0W7 255 aaPredicted RBP12.36□□□□□ -0.43
HDLBP-242ENST00000488013 CNNM3Q8NE01 707 aa12.36□□□□□ -0.43
HDLBP-242ENST00000488013 ENGASEQ8NFI3 743 aa12.36□□□□□ -0.43
HDLBP-242ENST00000488013 AFAP1L1Q8TED9 768 aa12.36□□□□□ -0.43
HDLBP-242ENST00000488013 FAM167AQ96KS9 214 aa12.36□□□□□ -0.43
HDLBP-242ENST00000488013 SMARCAD1Q9H4L7 1026 aa12.36□□□□□ -0.43
HDLBP-242ENST00000488013 BMP2KQ9NSY1 1161 aaPredicted RBP12.36□□□□□ -0.43
HDLBP-242ENST00000488013 TSKSQ9UJT2 592 aa12.36□□□□□ -0.43
HDLBP-242ENST00000488013 ZNF215Q9UL58 517 aaPredicted RBP12.36□□□□□ -0.43
HDLBP-242ENST00000488013 GNEQ9Y223 722 aaKnown RBP12.36□□□□□ -0.43
HDLBP-242ENST00000488013 IGKV6D-21A0A0A0MT36 114 aa12.35□□□□□ -0.43
HDLBP-242ENST00000488013 EML1O00423 815 aa12.35□□□□□ -0.43
HDLBP-242ENST00000488013 SLITRK3O94933 977 aa12.35□□□□□ -0.43
HDLBP-242ENST00000488013 ARIH2O95376 493 aa12.35□□□□□ -0.43
HDLBP-242ENST00000488013 HSPA1AP0DMV8 641 aaKnown RBP12.35□□□□□ -0.43
HDLBP-242ENST00000488013 HSPA1BP0DMV9 641 aaKnown RBP12.35□□□□□ -0.43
HDLBP-242ENST00000488013 HOXD8P13378 290 aaPredicted RBP12.35□□□□□ -0.43
HDLBP-242ENST00000488013 STAT5BP51692 787 aa12.35□□□□□ -0.43
HDLBP-242ENST00000488013 NKX3-2P78367 333 aa12.35□□□□□ -0.43
HDLBP-242ENST00000488013 ARHGAP1Q07960 439 aa12.35□□□□□ -0.43
HDLBP-242ENST00000488013 CACNB2Q08289 660 aaPredicted RBP12.35□□□□□ -0.43
HDLBP-242ENST00000488013 SNW1Q13573 536 aaKnown RBP12.35□□□□□ -0.43
HDLBP-242ENST00000488013 ZRSR1Q15695 479 aaKnown RBP12.35□□□□□ -0.43
HDLBP-242ENST00000488013 TMEM119Q4V9L6 283 aa12.35□□□□□ -0.43
HDLBP-242ENST00000488013 SPECC1Q5M775 1068 aa12.35□□□□□ -0.43
HDLBP-242ENST00000488013 TPH2Q8IWU9 490 aa12.35□□□□□ -0.43
HDLBP-242ENST00000488013 OR6J1Q8NGC5 347 aa12.35□□□□□ -0.43
HDLBP-242ENST00000488013 GJA10Q969M2 543 aa12.35□□□□□ -0.43
HDLBP-242ENST00000488013 GPR20Q99678 358 aa12.35□□□□□ -0.43
HDLBP-242ENST00000488013 LXNQ9BS40 222 aa12.35□□□□□ -0.43
HDLBP-242ENST00000488013 MMTAG2Q9BU76 263 aaKnown RBP12.35□□□□□ -0.43
HDLBP-242ENST00000488013 GTPBP4Q9BZE4 634 aaKnown RBP12.35□□□□□ -0.43
HDLBP-242ENST00000488013 TNMDQ9H2S6 317 aa12.35□□□□□ -0.43
HDLBP-242ENST00000488013 HMX1Q9NP08 348 aaPredicted RBP12.35□□□□□ -0.43
HDLBP-242ENST00000488013 ZNF302Q9NR11 478 aa12.35□□□□□ -0.43
HDLBP-242ENST00000488013 NRBP2Q9NSY0 501 aa12.35□□□□□ -0.43
HDLBP-242ENST00000488013 DACT1Q9NYF0 836 aa12.35□□□□□ -0.43
HDLBP-242ENST00000488013 KCND2Q9NZV8 630 aa12.35□□□□□ -0.43
HDLBP-242ENST00000488013 KIAA1024Q9UPX6 916 aa12.35□□□□□ -0.43
HDLBP-242ENST00000488013 RBBP6Q7Z6E9 1792 aaKnown RBP12.34□□□□□ -0.43
HDLBP-242ENST00000488013 A6NJR5 290 aa12.34□□□□□ -0.43
HDLBP-242ENST00000488013 PP2D1A8MPX8 630 aa12.34□□□□□ -0.43
HDLBP-242ENST00000488013 DYNC1LI2O43237 492 aaPredicted RBP12.34□□□□□ -0.43
HDLBP-242ENST00000488013 NR1I2O75469 434 aa12.34□□□□□ -0.43
HDLBP-242ENST00000488013 LGR5O75473 907 aa12.34□□□□□ -0.43
HDLBP-242ENST00000488013 SPATA31C1P0DKV0 1188 aa12.34□□□□□ -0.43
HDLBP-242ENST00000488013 ELNP15502 786 aa12.34□□□□□ -0.43
HDLBP-242ENST00000488013 PLCG1P19174 1290 aa12.34□□□□□ -0.43
HDLBP-242ENST00000488013 CNGA1P29973 690 aa12.34□□□□□ -0.43
HDLBP-242ENST00000488013 CDC25AP30304 524 aa12.34□□□□□ -0.43
HDLBP-242ENST00000488013 KARSQ15046 597 aaKnown RBP12.34□□□□□ -0.43
HDLBP-242ENST00000488013 SLC9C1Q4G0N8 1177 aa12.34□□□□□ -0.43
HDLBP-242ENST00000488013 XKR3Q5GH77 459 aa12.34□□□□□ -0.43
HDLBP-242ENST00000488013 PRAMEF19Q5SWL8 479 aa12.34□□□□□ -0.43
HDLBP-242ENST00000488013 CCDC183Q5T5S1 534 aa12.34□□□□□ -0.43
HDLBP-242ENST00000488013 SWSAP1Q6NVH7 229 aa12.34□□□□□ -0.43
HDLBP-242ENST00000488013 FBXO46Q6PJ61 603 aaPredicted RBP12.34□□□□□ -0.43
HDLBP-242ENST00000488013 KRBA2Q6ZNG9 492 aa12.34□□□□□ -0.43
HDLBP-242ENST00000488013 USP49Q70CQ1 688 aa12.34□□□□□ -0.43
HDLBP-242ENST00000488013 SV2BQ7L1I2 683 aa12.34□□□□□ -0.43
HDLBP-242ENST00000488013 TLK2Q86UE8 772 aa12.34□□□□□ -0.43
HDLBP-242ENST00000488013 GLG1Q92896 1179 aa12.34□□□□□ -0.43
HDLBP-242ENST00000488013 DHX58Q96C10 678 aa12.34□□□□□ -0.43
HDLBP-242ENST00000488013 CCDC43Q96MW1 224 aaKnown RBP12.34□□□□□ -0.43
HDLBP-242ENST00000488013 NUP62CLQ9H1M0 184 aa12.34□□□□□ -0.43
HDLBP-242ENST00000488013 GOLPH3LQ9H4A5 285 aa12.34□□□□□ -0.43
HDLBP-242ENST00000488013 ANKEF1Q9NU02 776 aa12.34□□□□□ -0.43
HDLBP-242ENST00000488013 ERAP1Q9NZ08 941 aa12.34□□□□□ -0.43
HDLBP-242ENST00000488013 MAFBQ9Y5Q3 323 aaPredicted RBP12.34□□□□□ -0.43
HDLBP-242ENST00000488013 PTCH2Q9Y6C5 1203 aa12.34□□□□□ -0.43
HDLBP-242ENST00000488013 EMSYQ7Z589 1322 aa12.34□□□□□ -0.43
HDLBP-242ENST00000488013 FOXN1O15353 648 aa12.33□□□□□ -0.44
HDLBP-242ENST00000488013 MED24O75448 989 aa12.33□□□□□ -0.44
HDLBP-242ENST00000488013 SMC2O95347 1197 aa12.33□□□□□ -0.44
HDLBP-242ENST00000488013 EYA4O95677 639 aa12.33□□□□□ -0.44
HDLBP-242ENST00000488013 INHAP05111 366 aa12.33□□□□□ -0.44
HDLBP-242ENST00000488013 LIG1P18858 919 aa12.33□□□□□ -0.44
HDLBP-242ENST00000488013 TCF7P36402 384 aaPredicted RBP12.33□□□□□ -0.44
HDLBP-242ENST00000488013 GJA9P57773 515 aa12.33□□□□□ -0.44
HDLBP-242ENST00000488013 SP4Q02446 784 aa12.33□□□□□ -0.44
HDLBP-242ENST00000488013 GRB10Q13322 594 aa12.33□□□□□ -0.44
HDLBP-242ENST00000488013 E2F4Q16254 413 aa12.33□□□□□ -0.44
HDLBP-242ENST00000488013 HSDL1Q3SXM5 330 aa12.33□□□□□ -0.44
HDLBP-242ENST00000488013 PDXDC2PQ6P474 469 aa12.33□□□□□ -0.44
HDLBP-242ENST00000488013 PDILTQ8N807 584 aa12.33□□□□□ -0.44
HDLBP-242ENST00000488013 PCSK9Q8NBP7 692 aaKnown RBP12.33□□□□□ -0.44
HDLBP-242ENST00000488013 GPT2Q8TD30 523 aa12.33□□□□□ -0.44
HDLBP-242ENST00000488013 AFG1LQ8WV93 481 aa12.33□□□□□ -0.44
HDLBP-242ENST00000488013 LARP4BQ92615 738 aaKnown RBP12.33□□□□□ -0.44
HDLBP-242ENST00000488013 RAD54LQ92698 747 aa12.33□□□□□ -0.44
HDLBP-242ENST00000488013 CCDC47Q96A33 483 aaKnown RBP12.33□□□□□ -0.44
HDLBP-242ENST00000488013 DYDC2Q96IM9 177 aa12.33□□□□□ -0.44
HDLBP-242ENST00000488013 UIMC1Q96RL1 719 aa12.33□□□□□ -0.44
HDLBP-242ENST00000488013 JPH2Q9BR39 696 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms