RNA–Protein interactions for RNA: ENST00000487997.1

PTBP3-208, Transcript of polypyrimidine tract binding protein 3, human

TSL 3

Gene PTBP3, Length 389 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTBP3-208	ENST00000487997	HSDL1	Q3SXM5	330 aa		10.82	□□□□□ -0.68
PTBP3-208	ENST00000487997	NIPA1	Q7RTP0	329 aa		10.82	□□□□□ -0.68
PTBP3-208	ENST00000487997	ANKRD33	Q7Z3H0	272 aa		10.82	□□□□□ -0.68
PTBP3-208	ENST00000487997	PLA2G4D	Q86XP0	818 aa		10.82	□□□□□ -0.68
PTBP3-208	ENST00000487997	MTR	Q99707	1265 aa		10.82	□□□□□ -0.68
PTBP3-208	ENST00000487997	KCNH7	Q9NS40	1196 aa		10.82	□□□□□ -0.68
PTBP3-208	ENST00000487997	TMEM39A	Q9NV64	488 aa		10.82	□□□□□ -0.68
PTBP3-208	ENST00000487997	KIF3A	Q9Y496	699 aa		10.82	□□□□□ -0.68
PTBP3-208	ENST00000487997	CEP290	O15078	2479 aa		10.81	□□□□□ -0.68
PTBP3-208	ENST00000487997	MEIS1	O00470	390 aa		10.81	□□□□□ -0.68
PTBP3-208	ENST00000487997	ADAMTS3	O15072	1205 aa		10.81	□□□□□ -0.68
PTBP3-208	ENST00000487997	ATP9A	O75110	1047 aa		10.81	□□□□□ -0.68
PTBP3-208	ENST00000487997	SUPT20HL2	P0C7V6	817 aa		10.81	□□□□□ -0.68
PTBP3-208	ENST00000487997	ZNF286B	P0CG31	522 aa		10.81	□□□□□ -0.68
PTBP3-208	ENST00000487997	FDPS	P14324	419 aa	Known RBP	10.81	□□□□□ -0.68
PTBP3-208	ENST00000487997	RAG1	P15918	1043 aa		10.81	□□□□□ -0.68
PTBP3-208	ENST00000487997	KCNA2	P16389	499 aa		10.81	□□□□□ -0.68
PTBP3-208	ENST00000487997	CDK7	P50613	346 aa		10.81	□□□□□ -0.68
PTBP3-208	ENST00000487997	PTPN11	Q06124	597 aa	Predicted RBP	10.81	□□□□□ -0.68
PTBP3-208	ENST00000487997	NBPF20	Q3BBV1	942 aa		10.81	□□□□□ -0.68
PTBP3-208	ENST00000487997	PRR16	Q569H4	304 aa		10.81	□□□□□ -0.68
PTBP3-208	ENST00000487997	SMYD5	Q6GMV2	418 aa		10.81	□□□□□ -0.68
PTBP3-208	ENST00000487997	NFRKB	Q6P4R8	1299 aa		10.81	□□□□□ -0.68
PTBP3-208	ENST00000487997	C7orf31	Q8N865	590 aa		10.81	□□□□□ -0.68
PTBP3-208	ENST00000487997	CYP2W1	Q8TAV3	490 aa		10.81	□□□□□ -0.68
PTBP3-208	ENST00000487997	TBCK	Q8TEA7	893 aa		10.81	□□□□□ -0.68
PTBP3-208	ENST00000487997	C8orf76	Q96K31	380 aa		10.81	□□□□□ -0.68
PTBP3-208	ENST00000487997	ZNF577	Q9BSK1	485 aa		10.81	□□□□□ -0.68
PTBP3-208	ENST00000487997	JPH1	Q9HDC5	661 aa	Predicted RBP	10.81	□□□□□ -0.68
PTBP3-208	ENST00000487997	SLC9A2	Q9UBY0	812 aa		10.81	□□□□□ -0.68
PTBP3-208	ENST00000487997	ZNF215	Q9UL58	517 aa	Predicted RBP	10.81	□□□□□ -0.68
PTBP3-208	ENST00000487997	NOD1	Q9Y239	953 aa		10.81	□□□□□ -0.68
PTBP3-208	ENST00000487997	NFASC	O94856	1347 aa		10.81	□□□□□ -0.68
PTBP3-208	ENST00000487997	FAM86B1	E9PN63	330 aa		10.8	□□□□□ -0.68
PTBP3-208	ENST00000487997	TULP1	O00294	542 aa	Predicted RBP	10.8	□□□□□ -0.68
PTBP3-208	ENST00000487997	FAM86B2	P0C5J1	330 aa		10.8	□□□□□ -0.68
PTBP3-208	ENST00000487997	AR	P10275	920 aa		10.8	□□□□□ -0.68
PTBP3-208	ENST00000487997	FAAP100	Q0VG06	881 aa		10.8	□□□□□ -0.68
PTBP3-208	ENST00000487997	GNL2	Q13823	731 aa	Known RBP	10.8	□□□□□ -0.68
PTBP3-208	ENST00000487997	KIAA0753	Q2KHM9	967 aa		10.8	□□□□□ -0.68
PTBP3-208	ENST00000487997	UTP14C	Q5TAP6	766 aa	Known RBP	10.8	□□□□□ -0.68
PTBP3-208	ENST00000487997	FAM126B	Q8IXS8	530 aa		10.8	□□□□□ -0.68
PTBP3-208	ENST00000487997	SLC43A3	Q8NBI5	491 aa		10.8	□□□□□ -0.68
PTBP3-208	ENST00000487997	SEPT1	Q8WYJ6	367 aa		10.8	□□□□□ -0.68
PTBP3-208	ENST00000487997	TMX3	Q96JJ7	454 aa		10.8	□□□□□ -0.68
PTBP3-208	ENST00000487997	GPR20	Q99678	358 aa		10.8	□□□□□ -0.68
PTBP3-208	ENST00000487997	NAP1L4	Q99733	375 aa	Known RBP	10.8	□□□□□ -0.68
PTBP3-208	ENST00000487997	BCAS3	Q9H6U6	928 aa		10.8	□□□□□ -0.68
PTBP3-208	ENST00000487997	AGO4	Q9HCK5	861 aa	Known RBP	10.8	□□□□□ -0.68
PTBP3-208	ENST00000487997	PDLIM7	Q9NR12	457 aa		10.8	□□□□□ -0.68
PTBP3-208	ENST00000487997	GJB4	Q9NTQ9	266 aa		10.8	□□□□□ -0.68
PTBP3-208	ENST00000487997	EVPL	Q92817	2033 aa		10.8	□□□□□ -0.68
PTBP3-208	ENST00000487997		H3BRB1	525 aa		10.79	□□□□□ -0.68
PTBP3-208	ENST00000487997		M0R2N6	131 aa		10.79	□□□□□ -0.68
PTBP3-208	ENST00000487997	DDX39A	O00148	427 aa	Known RBP	10.79	□□□□□ -0.68
PTBP3-208	ENST00000487997	IPO5	O00410	1097 aa	Known RBP	10.79	□□□□□ -0.68
PTBP3-208	ENST00000487997	MARCH6	O60337	910 aa		10.79	□□□□□ -0.68
PTBP3-208	ENST00000487997	F2	P00734	622 aa		10.79	□□□□□ -0.68
PTBP3-208	ENST00000487997	MMP1	P03956	469 aa		10.79	□□□□□ -0.68
PTBP3-208	ENST00000487997	LGALS2	P05162	132 aa		10.79	□□□□□ -0.68
PTBP3-208	ENST00000487997	HOXD8	P13378	290 aa	Predicted RBP	10.79	□□□□□ -0.68
PTBP3-208	ENST00000487997	CIITA	P33076	1130 aa		10.79	□□□□□ -0.68
PTBP3-208	ENST00000487997	TCF7	P36402	384 aa	Predicted RBP	10.79	□□□□□ -0.68
PTBP3-208	ENST00000487997	MDM2	Q00987	491 aa	Predicted RBP	10.79	□□□□□ -0.68
PTBP3-208	ENST00000487997	ST3GAL1	Q11201	340 aa		10.79	□□□□□ -0.68
PTBP3-208	ENST00000487997	INF2	Q27J81	1249 aa		10.79	□□□□□ -0.68
PTBP3-208	ENST00000487997	LETM2	Q2VYF4	491 aa		10.79	□□□□□ -0.68
PTBP3-208	ENST00000487997	KRT40	Q6A162	431 aa		10.79	□□□□□ -0.68
PTBP3-208	ENST00000487997	PIK3AP1	Q6ZUJ8	805 aa		10.79	□□□□□ -0.68
PTBP3-208	ENST00000487997	NEK8	Q86SG6	692 aa		10.79	□□□□□ -0.68
PTBP3-208	ENST00000487997	CRYGN	Q8WXF5	182 aa		10.79	□□□□□ -0.68
PTBP3-208	ENST00000487997	GLG1	Q92896	1179 aa		10.79	□□□□□ -0.68
PTBP3-208	ENST00000487997	TUT1	Q9H6E5	874 aa	Known RBP	10.79	□□□□□ -0.68
PTBP3-208	ENST00000487997	AZI2	Q9H6S1	392 aa		10.79	□□□□□ -0.68
PTBP3-208	ENST00000487997	TBC1D22B	Q9NU19	505 aa		10.79	□□□□□ -0.68
PTBP3-208	ENST00000487997	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	10.79	□□□□□ -0.68
PTBP3-208	ENST00000487997	LOXHD1	Q8IVV2	1947 aa		10.79	□□□□□ -0.68
PTBP3-208	ENST00000487997	GRIN2D	O15399	1336 aa		10.79	□□□□□ -0.68
PTBP3-208	ENST00000487997	IGLV3-22	A0A075B6J6	115 aa		10.78	□□□□□ -0.68
PTBP3-208	ENST00000487997	KIAA0355	O15063	1070 aa		10.78	□□□□□ -0.68
PTBP3-208	ENST00000487997	B4GALT4	O60513	344 aa		10.78	□□□□□ -0.68
PTBP3-208	ENST00000487997	CD4	P01730	458 aa		10.78	□□□□□ -0.68
PTBP3-208	ENST00000487997	GNAT1	P11488	350 aa		10.78	□□□□□ -0.68
PTBP3-208	ENST00000487997	GCFC2	P16383	781 aa	Known RBP	10.78	□□□□□ -0.68
PTBP3-208	ENST00000487997	DNAJB2	P25686	324 aa		10.78	□□□□□ -0.68
PTBP3-208	ENST00000487997	MAGEA10	P43363	369 aa	Predicted RBP	10.78	□□□□□ -0.68
PTBP3-208	ENST00000487997	GUCY1B3	Q02153	619 aa		10.78	□□□□□ -0.68
PTBP3-208	ENST00000487997	NPY5R	Q15761	445 aa		10.78	□□□□□ -0.68
PTBP3-208	ENST00000487997	PTGIS	Q16647	500 aa		10.78	□□□□□ -0.68
PTBP3-208	ENST00000487997	MOXD1	Q6UVY6	613 aa		10.78	□□□□□ -0.68
PTBP3-208	ENST00000487997	SH3RF1	Q7Z6J0	888 aa		10.78	□□□□□ -0.68
PTBP3-208	ENST00000487997	DIS3L2	Q8IYB7	885 aa	Known RBP	10.78	□□□□□ -0.68
PTBP3-208	ENST00000487997	CCDC155	Q8N6L0	562 aa		10.78	□□□□□ -0.68
PTBP3-208	ENST00000487997	KAT2B	Q92831	832 aa		10.78	□□□□□ -0.68
PTBP3-208	ENST00000487997	TNPO1	Q92973	898 aa	Known RBP	10.78	□□□□□ -0.68
PTBP3-208	ENST00000487997	UIMC1	Q96RL1	719 aa		10.78	□□□□□ -0.68
PTBP3-208	ENST00000487997	C16orf70	Q9BSU1	422 aa		10.78	□□□□□ -0.68
PTBP3-208	ENST00000487997	UBE2O	Q9C0C9	1292 aa	Known RBP	10.78	□□□□□ -0.68
PTBP3-208	ENST00000487997	TRPV6	Q9H1D0	765 aa		10.78	□□□□□ -0.68
PTBP3-208	ENST00000487997	SMARCAD1	Q9H4L7	1026 aa		10.78	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms