RNA–Protein interactions for RNA: ENST00000487453.1

PRDM2-208, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-208ENST00000487453 GABBR1Q9UBS5 961 aa14.35□□□□□ -0.11
PRDM2-208ENST00000487453 CIZ1Q9ULV3 898 aaPredicted RBP14.35□□□□□ -0.11
PRDM2-208ENST00000487453 IGSF9BQ9UPX0 1349 aa14.35□□□□□ -0.11
PRDM2-208ENST00000487453 EML1O00423 815 aa14.34□□□□□ -0.11
PRDM2-208ENST00000487453 LGR5O75473 907 aa14.34□□□□□ -0.11
PRDM2-208ENST00000487453 FXR2P51116 673 aaKnown RBP eCLIP14.34□□□□□ -0.11
PRDM2-208ENST00000487453 CYP4A11Q02928 519 aa14.34□□□□□ -0.11
PRDM2-208ENST00000487453 UGCGQ16739 394 aa14.34□□□□□ -0.11
PRDM2-208ENST00000487453 TRMT1LQ7Z2T5 733 aaKnown RBP14.34□□□□□ -0.11
PRDM2-208ENST00000487453 UBE2Q1Q7Z7E8 422 aa14.34□□□□□ -0.11
PRDM2-208ENST00000487453 C7orf31Q8N865 590 aa14.34□□□□□ -0.11
PRDM2-208ENST00000487453 KAT2BQ92831 832 aa14.34□□□□□ -0.11
PRDM2-208ENST00000487453 ATP6V0A1Q93050 837 aa14.34□□□□□ -0.11
PRDM2-208ENST00000487453 PCYT2Q99447 389 aa14.34□□□□□ -0.11
PRDM2-208ENST00000487453 LRWD1Q9UFC0 647 aa14.34□□□□□ -0.11
PRDM2-208ENST00000487453 TRPC6Q9Y210 931 aa14.34□□□□□ -0.11
PRDM2-208ENST00000487453 WDR81Q562E7 1941 aa14.33□□□□□ -0.11
PRDM2-208ENST00000487453 IGKV6D-21A0A0A0MT36 114 aa14.33□□□□□ -0.12
PRDM2-208ENST00000487453 MARCKSP29966 332 aaPredicted RBP14.33□□□□□ -0.12
PRDM2-208ENST00000487453 SLC26A2P50443 739 aa14.33□□□□□ -0.12
PRDM2-208ENST00000487453 KRT85P78386 507 aa14.33□□□□□ -0.12
PRDM2-208ENST00000487453 PRKCEQ02156 737 aa14.33□□□□□ -0.12
PRDM2-208ENST00000487453 PTPAQ15257 358 aa14.33□□□□□ -0.12
PRDM2-208ENST00000487453 NBPF20Q3BBV1 942 aa14.33□□□□□ -0.12
PRDM2-208ENST00000487453 ARL6IP4Q66PJ3 421 aaKnown RBP14.33□□□□□ -0.12
PRDM2-208ENST00000487453 SLC39A5Q6ZMH5 540 aa14.33□□□□□ -0.12
PRDM2-208ENST00000487453 PLPPR4Q7Z2D5 763 aa14.33□□□□□ -0.12
PRDM2-208ENST00000487453 ERMNQ8TAM6 284 aa14.33□□□□□ -0.12
PRDM2-208ENST00000487453 AFAP1L1Q8TED9 768 aa14.33□□□□□ -0.12
PRDM2-208ENST00000487453 CHMP5Q9NZZ3 219 aa14.33□□□□□ -0.12
PRDM2-208ENST00000487453 CFAP45Q9UL16 551 aa14.33□□□□□ -0.12
PRDM2-208ENST00000487453 ATP11BQ9Y2G3 1177 aa14.33□□□□□ -0.12
PRDM2-208ENST00000487453 SCN10AQ9Y5Y9 1956 aa14.33□□□□□ -0.12
PRDM2-208ENST00000487453 PP2D1A8MPX8 630 aa14.32□□□□□ -0.12
PRDM2-208ENST00000487453 HAS3O00219 553 aa14.32□□□□□ -0.12
PRDM2-208ENST00000487453 PQBP1O60828 265 aaKnown RBP14.32□□□□□ -0.12
PRDM2-208ENST00000487453 YEATS4O95619 227 aa14.32□□□□□ -0.12
PRDM2-208ENST00000487453 NASPP49321 788 aaPredicted RBP14.32□□□□□ -0.12
PRDM2-208ENST00000487453 SLC39A14Q15043 492 aa14.32□□□□□ -0.12
PRDM2-208ENST00000487453 EPHA7Q15375 998 aa14.32□□□□□ -0.12
PRDM2-208ENST00000487453 IL17AQ16552 155 aa14.32□□□□□ -0.12
PRDM2-208ENST00000487453 LRRC26Q2I0M4 334 aa14.32□□□□□ -0.12
PRDM2-208ENST00000487453 TRIM60Q495X7 471 aa14.32□□□□□ -0.12
PRDM2-208ENST00000487453 HAUS3Q68CZ6 603 aa14.32□□□□□ -0.12
PRDM2-208ENST00000487453 ATL3Q6DD88 541 aa14.32□□□□□ -0.12
PRDM2-208ENST00000487453 NEK9Q8TD19 979 aa14.32□□□□□ -0.12
PRDM2-208ENST00000487453 SNX29Q8TEQ0 813 aa14.32□□□□□ -0.12
PRDM2-208ENST00000487453 DYDC2Q96IM9 177 aa14.32□□□□□ -0.12
PRDM2-208ENST00000487453 CHAMP1Q96JM3 812 aa14.32□□□□□ -0.12
PRDM2-208ENST00000487453 EIF2AK1Q9BQI3 630 aaKnown RBP14.32□□□□□ -0.12
PRDM2-208ENST00000487453 LXNQ9BS40 222 aa14.32□□□□□ -0.12
PRDM2-208ENST00000487453 HTATIP2Q9BUP3 242 aa14.32□□□□□ -0.12
PRDM2-208ENST00000487453 RNPEPQ9H4A4 650 aa14.32□□□□□ -0.12
PRDM2-208ENST00000487453 RGL1Q9NZL6 768 aa14.32□□□□□ -0.12
PRDM2-208ENST00000487453 MAFBQ9Y5Q3 323 aaPredicted RBP14.32□□□□□ -0.12
PRDM2-208ENST00000487453 ARID2Q68CP9 1835 aa14.31□□□□□ -0.12
PRDM2-208ENST00000487453 ALPK3Q96L96 1907 aa14.31□□□□□ -0.12
PRDM2-208ENST00000487453 POTEB3A0JP26 581 aa14.31□□□□□ -0.12
PRDM2-208ENST00000487453 ARVCFO00192 962 aa14.31□□□□□ -0.12
PRDM2-208ENST00000487453 SPTLC2O15270 562 aa14.31□□□□□ -0.12
PRDM2-208ENST00000487453 DKC1O60832 514 aaKnown RBP eCLIP14.31□□□□□ -0.12
PRDM2-208ENST00000487453 OATP04181 439 aa14.31□□□□□ -0.12
PRDM2-208ENST00000487453 P4HBP07237 508 aaKnown RBP14.31□□□□□ -0.12
PRDM2-208ENST00000487453 SMIM10L2AP0DMW4 78 aa14.31□□□□□ -0.12
PRDM2-208ENST00000487453 SMIM10L2BP0DMW5 78 aa14.31□□□□□ -0.12
PRDM2-208ENST00000487453 QARSP47897 775 aaKnown RBP14.31□□□□□ -0.12
PRDM2-208ENST00000487453 RTP1P59025 263 aa14.31□□□□□ -0.12
PRDM2-208ENST00000487453 PSMC5P62195 406 aa14.31□□□□□ -0.12
PRDM2-208ENST00000487453 IGBP1P78318 339 aa14.31□□□□□ -0.12
PRDM2-208ENST00000487453 CTTNQ14247 550 aaKnown RBP14.31□□□□□ -0.12
PRDM2-208ENST00000487453 PLCB4Q15147 1175 aa14.31□□□□□ -0.12
PRDM2-208ENST00000487453 NFRKBQ6P4R8 1299 aa14.31□□□□□ -0.12
PRDM2-208ENST00000487453 POTEBQ6S5H4 581 aa14.31□□□□□ -0.12
PRDM2-208ENST00000487453 TPH2Q8IWU9 490 aa14.31□□□□□ -0.12
PRDM2-208ENST00000487453 IGSF22Q8N9C0 903 aa14.31□□□□□ -0.12
PRDM2-208ENST00000487453 LINC00301Q8NCQ3 95 aa14.31□□□□□ -0.12
PRDM2-208ENST00000487453 TNPO1Q92973 898 aaKnown RBP14.31□□□□□ -0.12
PRDM2-208ENST00000487453 FAM167AQ96KS9 214 aa14.31□□□□□ -0.12
PRDM2-208ENST00000487453 HDAC6Q9UBN7 1215 aa14.31□□□□□ -0.12
PRDM2-208ENST00000487453 SEPT9Q9UHD8 586 aaPredicted RBP14.31□□□□□ -0.12
PRDM2-208ENST00000487453 FBXO2Q9UK22 296 aaPredicted RBP14.31□□□□□ -0.12
PRDM2-208ENST00000487453 NOD1Q9Y239 953 aa14.31□□□□□ -0.12
PRDM2-208ENST00000487453 GRIN2DO15399 1336 aa14.31□□□□□ -0.12
PRDM2-208ENST00000487453 MROH7Q68CQ1 1323 aa14.31□□□□□ -0.12
PRDM2-208ENST00000487453 MYH9P35579 1960 aaKnown RBP14.31□□□□□ -0.12
PRDM2-208ENST00000487453 C17orf102A2RUQ5 167 aa14.3□□□□□ -0.12
PRDM2-208ENST00000487453 TLR3O15455 904 aaKnown RBP14.3□□□□□ -0.12
PRDM2-208ENST00000487453 ZNF862O60290 1169 aa14.3□□□□□ -0.12
PRDM2-208ENST00000487453 CDC25AP30304 524 aa14.3□□□□□ -0.12
PRDM2-208ENST00000487453 CCT6AP40227 531 aaKnown RBP14.3□□□□□ -0.12
PRDM2-208ENST00000487453 GRIN1Q05586 938 aa14.3□□□□□ -0.12
PRDM2-208ENST00000487453 PPFIA1Q13136 1202 aa14.3□□□□□ -0.12
PRDM2-208ENST00000487453 PDIA5Q14554 519 aa14.3□□□□□ -0.12
PRDM2-208ENST00000487453 ZRSR1Q15695 479 aaKnown RBP14.3□□□□□ -0.12
PRDM2-208ENST00000487453 KRT79Q5XKE5 535 aa14.3□□□□□ -0.12
PRDM2-208ENST00000487453 KRI1Q8N9T8 703 aaKnown RBP14.3□□□□□ -0.12
PRDM2-208ENST00000487453 RASSF8Q8NHQ8 419 aa14.3□□□□□ -0.12
PRDM2-208ENST00000487453 KCNG4Q8TDN1 519 aa14.3□□□□□ -0.12
PRDM2-208ENST00000487453 ATP8B4Q8TF62 1192 aa14.3□□□□□ -0.12
PRDM2-208ENST00000487453 SPATA32Q96LK8 384 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms