RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 GDPD5Q8WTR4 605 aa14.19□□□□□ -0.14
SREBF1-215ENST00000487401 DNAJB3Q8WWF6 145 aa14.19□□□□□ -0.14
SREBF1-215ENST00000487401 SUGCTQ9HAC7 445 aa14.19□□□□□ -0.14
SREBF1-215ENST00000487401 C6orf50Q9HD87 102 aa14.19□□□□□ -0.14
SREBF1-215ENST00000487401 LMCD1Q9NZU5 365 aa14.19□□□□□ -0.14
SREBF1-215ENST00000487401 COG5Q9UP83 839 aa14.19□□□□□ -0.14
SREBF1-215ENST00000487401 MBLAC1A4D2B0 266 aaPredicted RBP14.18□□□□□ -0.14
SREBF1-215ENST00000487401 PRPF3O43395 683 aaKnown RBP14.18□□□□□ -0.14
SREBF1-215ENST00000487401 LPXNO60711 386 aa14.18□□□□□ -0.14
SREBF1-215ENST00000487401 RPLP2P05387 115 aaKnown RBP14.18□□□□□ -0.14
SREBF1-215ENST00000487401 GHRP10912 638 aa14.18□□□□□ -0.14
SREBF1-215ENST00000487401 CLK2P49760 499 aaKnown RBP14.18□□□□□ -0.14
SREBF1-215ENST00000487401 STAT5BP51692 787 aa14.18□□□□□ -0.14
SREBF1-215ENST00000487401 HTRA4P83105 476 aaPredicted RBP14.18□□□□□ -0.14
SREBF1-215ENST00000487401 ITGB3BPQ13352 177 aaPredicted RBP14.18□□□□□ -0.14
SREBF1-215ENST00000487401 MKRN4PQ13434 485 aaPredicted RBP14.18□□□□□ -0.14
SREBF1-215ENST00000487401 MARCH8Q5T0T0 291 aa14.18□□□□□ -0.14
SREBF1-215ENST00000487401 NIPA1Q7RTP0 329 aa14.18□□□□□ -0.14
SREBF1-215ENST00000487401 PLPPR4Q7Z2D5 763 aa14.18□□□□□ -0.14
SREBF1-215ENST00000487401 PLA2G4DQ86XP0 818 aa14.18□□□□□ -0.14
SREBF1-215ENST00000487401 FBXO22Q8NEZ5 403 aa14.18□□□□□ -0.14
SREBF1-215ENST00000487401 TOP1MTQ969P6 601 aa14.18□□□□□ -0.14
SREBF1-215ENST00000487401 UHRF1Q96T88 793 aaPredicted RBP14.18□□□□□ -0.14
SREBF1-215ENST00000487401 PCYT2Q99447 389 aa14.18□□□□□ -0.14
SREBF1-215ENST00000487401 OSBPL7Q9BZF2 842 aa14.18□□□□□ -0.14
SREBF1-215ENST00000487401 FAM49AQ9H0Q0 323 aaPredicted RBP14.18□□□□□ -0.14
SREBF1-215ENST00000487401 VCANP13611 3396 aa14.18□□□□□ -0.14
SREBF1-215ENST00000487401 CHD7Q9P2D1 2997 aa14.17□□□□□ -0.14
SREBF1-215ENST00000487401 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.17□□□□□ -0.14
SREBF1-215ENST00000487401 DDX39AO00148 427 aaKnown RBP14.17□□□□□ -0.14
SREBF1-215ENST00000487401 BACH1O14867 736 aa14.17□□□□□ -0.14
SREBF1-215ENST00000487401 GNA11P29992 359 aa14.17□□□□□ -0.14
SREBF1-215ENST00000487401 TFF2Q03403 129 aa14.17□□□□□ -0.14
SREBF1-215ENST00000487401 PLCB4Q15147 1175 aa14.17□□□□□ -0.14
SREBF1-215ENST00000487401 IER5Q5VY09 327 aa14.17□□□□□ -0.14
SREBF1-215ENST00000487401 FAM160B1Q5W0V3 765 aa14.17□□□□□ -0.14
SREBF1-215ENST00000487401 FBXL16Q8N461 479 aa14.17□□□□□ -0.14
SREBF1-215ENST00000487401 BICD2Q8TD16 824 aa14.17□□□□□ -0.14
SREBF1-215ENST00000487401 HLA-CQ95604 372 aa14.17□□□□□ -0.14
SREBF1-215ENST00000487401 SAMD11Q96NU1 681 aa14.17□□□□□ -0.14
SREBF1-215ENST00000487401 C17orf80Q9BSJ5 609 aa14.17□□□□□ -0.14
SREBF1-215ENST00000487401 CDY2AQ9Y6F7 541 aa14.17□□□□□ -0.14
SREBF1-215ENST00000487401 SPTBN5Q9NRC6 3674 aaKnown RBP14.17□□□□□ -0.14
SREBF1-215ENST00000487401 ESYT2A0FGR8 921 aa14.16□□□□□ -0.14
SREBF1-215ENST00000487401 POTEB3A0JP26 581 aa14.16□□□□□ -0.14
SREBF1-215ENST00000487401 M0QZ92 97 aa14.16□□□□□ -0.14
SREBF1-215ENST00000487401 NEFLP07196 543 aa14.16□□□□□ -0.14
SREBF1-215ENST00000487401 CYP3A4P08684 503 aa14.16□□□□□ -0.14
SREBF1-215ENST00000487401 SLC26A2P50443 739 aa14.16□□□□□ -0.14
SREBF1-215ENST00000487401 MRPS6P82932 125 aaKnown RBP14.16□□□□□ -0.14
SREBF1-215ENST00000487401 MGAT3Q09327 533 aa14.16□□□□□ -0.14
SREBF1-215ENST00000487401 LPIN1Q14693 890 aa14.16□□□□□ -0.14
SREBF1-215ENST00000487401 POTEBQ6S5H4 581 aa14.16□□□□□ -0.14
SREBF1-215ENST00000487401 REXO1Q8N1G1 1221 aaKnown RBP14.16□□□□□ -0.14
SREBF1-215ENST00000487401 SP7Q8TDD2 431 aaPredicted RBP14.16□□□□□ -0.14
SREBF1-215ENST00000487401 PHKBQ93100 1093 aa14.16□□□□□ -0.14
SREBF1-215ENST00000487401 ZBTB10Q96DT7 871 aa14.16□□□□□ -0.14
SREBF1-215ENST00000487401 IL17RAQ96F46 866 aa14.16□□□□□ -0.14
SREBF1-215ENST00000487401 SLC26A6Q9BXS9 759 aa14.16□□□□□ -0.14
SREBF1-215ENST00000487401 ZMYND12Q9H0C1 365 aa14.16□□□□□ -0.14
SREBF1-215ENST00000487401 TCEAL9Q9UHQ7 104 aa14.16□□□□□ -0.14
SREBF1-215ENST00000487401 PCDHA2Q9Y5H9 948 aa14.16□□□□□ -0.14
SREBF1-215ENST00000487401 BAZ2BQ9UIF8 2168 aaKnown RBP14.15□□□□□ -0.14
SREBF1-215ENST00000487401 FAM86B1E9PN63 330 aa14.15□□□□□ -0.14
SREBF1-215ENST00000487401 ENPP3O14638 875 aa14.15□□□□□ -0.14
SREBF1-215ENST00000487401 ATG7O95352 703 aa14.15□□□□□ -0.14
SREBF1-215ENST00000487401 FAM86B2P0C5J1 330 aa14.15□□□□□ -0.14
SREBF1-215ENST00000487401 BMP1P13497 986 aa14.15□□□□□ -0.14
SREBF1-215ENST00000487401 PKN1Q16512 942 aa14.15□□□□□ -0.14
SREBF1-215ENST00000487401 PTPROQ16827 1216 aa14.15□□□□□ -0.14
SREBF1-215ENST00000487401 EPC2Q52LR7 807 aa14.15□□□□□ -0.14
SREBF1-215ENST00000487401 FBXO47Q5MNV8 452 aa14.15□□□□□ -0.14
SREBF1-215ENST00000487401 MIS18BP1Q6P0N0 1132 aa14.15□□□□□ -0.14
SREBF1-215ENST00000487401 ABHD15Q6UXT9 468 aa14.15□□□□□ -0.14
SREBF1-215ENST00000487401 TSHZ1Q6ZSZ6 1077 aa14.15□□□□□ -0.14
SREBF1-215ENST00000487401 CCDC148Q8NFR7 591 aa14.15□□□□□ -0.14
SREBF1-215ENST00000487401 ZNF577Q9BSK1 485 aa14.15□□□□□ -0.14
SREBF1-215ENST00000487401 TBC1D22BQ9NU19 505 aa14.15□□□□□ -0.14
SREBF1-215ENST00000487401 IPO5O00410 1097 aaKnown RBP14.14□□□□□ -0.15
SREBF1-215ENST00000487401 HBP1O60381 514 aa14.14□□□□□ -0.15
SREBF1-215ENST00000487401 PPFIA3O75145 1194 aa14.14□□□□□ -0.15
SREBF1-215ENST00000487401 CCNE2O96020 404 aa14.14□□□□□ -0.15
SREBF1-215ENST00000487401 IFNAR1P17181 557 aa14.14□□□□□ -0.15
SREBF1-215ENST00000487401 PDIA3P30101 505 aaKnown RBP14.14□□□□□ -0.15
SREBF1-215ENST00000487401 CCT2P78371 535 aaKnown RBP14.14□□□□□ -0.15
SREBF1-215ENST00000487401 SETQ01105 290 aaPredicted RBP14.14□□□□□ -0.15
SREBF1-215ENST00000487401 TMEM62Q0P6H9 643 aa14.14□□□□□ -0.15
SREBF1-215ENST00000487401 GPM6BQ13491 265 aa14.14□□□□□ -0.15
SREBF1-215ENST00000487401 SWSAP1Q6NVH7 229 aa14.14□□□□□ -0.15
SREBF1-215ENST00000487401 PDXDC2PQ6P474 469 aa14.14□□□□□ -0.15
SREBF1-215ENST00000487401 RUFY3Q7L099 469 aa14.14□□□□□ -0.15
SREBF1-215ENST00000487401 TMEM192Q8IY95 271 aa14.14□□□□□ -0.15
SREBF1-215ENST00000487401 CKAP2LQ8IYA6 745 aa14.14□□□□□ -0.15
SREBF1-215ENST00000487401 NME8Q8N427 588 aa14.14□□□□□ -0.15
SREBF1-215ENST00000487401 FIBCD1Q8N539 461 aa14.14□□□□□ -0.15
SREBF1-215ENST00000487401 ATP8B4Q8TF62 1192 aa14.14□□□□□ -0.15
SREBF1-215ENST00000487401 TRAPPC12Q8WVT3 735 aa14.14□□□□□ -0.15
SREBF1-215ENST00000487401 UIMC1Q96RL1 719 aa14.14□□□□□ -0.15
SREBF1-215ENST00000487401 RNF26Q9BY78 433 aaPredicted RBP14.14□□□□□ -0.15
SREBF1-215ENST00000487401 AGXT2Q9BYV1 514 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms