RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 PRAMEF25A6NGN4 478 aa6.67□□□□□ -1.34
PRPF38A-203ENST00000487160 RASSF10A6NK89 507 aa6.67□□□□□ -1.34
PRPF38A-203ENST00000487160 FBXO21O94952 628 aa6.67□□□□□ -1.34
PRPF38A-203ENST00000487160 ZBTB7AO95365 584 aa6.67□□□□□ -1.34
PRPF38A-203ENST00000487160 GJA4P35212 333 aa6.67□□□□□ -1.34
PRPF38A-203ENST00000487160 RAB27AP51159 221 aa6.67□□□□□ -1.34
PRPF38A-203ENST00000487160 GP2P55259 537 aaKnown RBP6.67□□□□□ -1.34
PRPF38A-203ENST00000487160 RAB3GAP1Q15042 981 aa6.67□□□□□ -1.34
PRPF38A-203ENST00000487160 ABCB5Q2M3G0 1257 aa6.67□□□□□ -1.34
PRPF38A-203ENST00000487160 INAVAQ3KP66 663 aa6.67□□□□□ -1.34
PRPF38A-203ENST00000487160 PAN2Q504Q3 1202 aaKnown RBP6.67□□□□□ -1.34
PRPF38A-203ENST00000487160 CATSPEREQ5SY80 951 aa6.67□□□□□ -1.34
PRPF38A-203ENST00000487160 CMIPQ8IY22 773 aa6.67□□□□□ -1.34
PRPF38A-203ENST00000487160 INTS4Q96HW7 963 aaKnown RBP6.67□□□□□ -1.34
PRPF38A-203ENST00000487160 BCAS3Q9H6U6 928 aa6.67□□□□□ -1.34
PRPF38A-203ENST00000487160 TOPORSQ9NS56 1045 aaPredicted RBP6.67□□□□□ -1.34
PRPF38A-203ENST00000487160 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.66□□□□□ -1.34
PRPF38A-203ENST00000487160 FOXP2O15409 715 aa6.66□□□□□ -1.34
PRPF38A-203ENST00000487160 MT-CO1P00395 513 aa6.66□□□□□ -1.34
PRPF38A-203ENST00000487160 MYBL2P10244 700 aa6.66□□□□□ -1.34
PRPF38A-203ENST00000487160 SDHAP31040 664 aa6.66□□□□□ -1.34
PRPF38A-203ENST00000487160 IARSP41252 1262 aaKnown RBP6.66□□□□□ -1.34
PRPF38A-203ENST00000487160 SCAND1P57086 179 aa6.66□□□□□ -1.34
PRPF38A-203ENST00000487160 KLF1Q13351 362 aaPredicted RBP6.66□□□□□ -1.34
PRPF38A-203ENST00000487160 LRRC32Q14392 662 aa6.66□□□□□ -1.34
PRPF38A-203ENST00000487160 SLC9A5Q14940 896 aa6.66□□□□□ -1.34
PRPF38A-203ENST00000487160 NFE2Q16621 373 aaPredicted RBP6.66□□□□□ -1.34
PRPF38A-203ENST00000487160 GPR158Q5T848 1215 aa6.66□□□□□ -1.34
PRPF38A-203ENST00000487160 ZBTB46Q86UZ6 589 aa6.66□□□□□ -1.34
PRPF38A-203ENST00000487160 ZZZ3Q8IYH5 903 aa6.66□□□□□ -1.34
PRPF38A-203ENST00000487160 RTF1Q92541 710 aaKnown RBP6.66□□□□□ -1.34
PRPF38A-203ENST00000487160 HOOK2Q96ED9 719 aa6.66□□□□□ -1.34
PRPF38A-203ENST00000487160 C16orf92Q96LL3 132 aa6.66□□□□□ -1.34
PRPF38A-203ENST00000487160 ZDHHC5Q9C0B5 715 aa6.66□□□□□ -1.34
PRPF38A-203ENST00000487160 AASDHPPTQ9NRN7 309 aa6.66□□□□□ -1.34
PRPF38A-203ENST00000487160 KLHL14Q9P2G3 628 aa6.66□□□□□ -1.34
PRPF38A-203ENST00000487160 SPEF1Q9Y4P9 236 aa6.66□□□□□ -1.34
PRPF38A-203ENST00000487160 SHTN1A0MZ66 631 aa6.65□□□□□ -1.34
PRPF38A-203ENST00000487160 GOLGA8AA7E2F4 631 aa6.65□□□□□ -1.34
PRPF38A-203ENST00000487160 GOLGA8BA8MQT2 603 aa6.65□□□□□ -1.34
PRPF38A-203ENST00000487160 AKAP10O43572 662 aa6.65□□□□□ -1.34
PRPF38A-203ENST00000487160 MMEP08473 750 aa6.65□□□□□ -1.34
PRPF38A-203ENST00000487160 TMEM253P0C7T8 217 aa6.65□□□□□ -1.34
PRPF38A-203ENST00000487160 PDE6BP35913 854 aa6.65□□□□□ -1.34
PRPF38A-203ENST00000487160 MAPKAPK2P49137 400 aa6.65□□□□□ -1.34
PRPF38A-203ENST00000487160 PDCD1Q15116 288 aa6.65□□□□□ -1.34
PRPF38A-203ENST00000487160 LRRC41Q15345 812 aa6.65□□□□□ -1.34
PRPF38A-203ENST00000487160 PTPN21Q16825 1174 aa6.65□□□□□ -1.34
PRPF38A-203ENST00000487160 NOL8Q76FK4 1167 aaKnown RBP6.65□□□□□ -1.34
PRPF38A-203ENST00000487160 ATG4DQ86TL0 474 aaPredicted RBP6.65□□□□□ -1.34
PRPF38A-203ENST00000487160 TTLL11Q8NHH1 800 aa6.65□□□□□ -1.34
PRPF38A-203ENST00000487160 TSR2Q969E8 191 aaKnown RBP6.65□□□□□ -1.34
PRPF38A-203ENST00000487160 CHMP4CQ96CF2 233 aa6.65□□□□□ -1.34
PRPF38A-203ENST00000487160 TSPAN17Q96FV3 270 aa6.65□□□□□ -1.34
PRPF38A-203ENST00000487160 FUBP3Q96I24 572 aaKnown RBP eCLIP6.65□□□□□ -1.34
PRPF38A-203ENST00000487160 SLC6A17Q9H1V8 727 aa6.65□□□□□ -1.34
PRPF38A-203ENST00000487160 MSRAQ9UJ68 235 aa6.65□□□□□ -1.34
PRPF38A-203ENST00000487160 WASHC2AQ641Q2 1341 aa6.65□□□□□ -1.35
PRPF38A-203ENST00000487160 SCO2A0A1W2PP80 73 aa6.64□□□□□ -1.35
PRPF38A-203ENST00000487160 OR14I1A6ND48 311 aa6.64□□□□□ -1.35
PRPF38A-203ENST00000487160 KDM1AO60341 852 aa6.64□□□□□ -1.35
PRPF38A-203ENST00000487160 FAHP16930 419 aa6.64□□□□□ -1.35
PRPF38A-203ENST00000487160 CD40P25942 277 aa6.64□□□□□ -1.35
PRPF38A-203ENST00000487160 FNTBP49356 437 aa6.64□□□□□ -1.35
PRPF38A-203ENST00000487160 EPHA7Q15375 998 aa6.64□□□□□ -1.35
PRPF38A-203ENST00000487160 PLEKHN1Q494U1 663 aaPredicted RBP6.64□□□□□ -1.35
PRPF38A-203ENST00000487160 FRMD7Q6ZUT3 714 aa6.64□□□□□ -1.35
PRPF38A-203ENST00000487160 ASB15Q8WXK1 588 aa6.64□□□□□ -1.35
PRPF38A-203ENST00000487160 ERCC4Q92889 916 aaPredicted RBP6.64□□□□□ -1.35
PRPF38A-203ENST00000487160 ZNF496Q96IT1 587 aaPredicted RBP6.64□□□□□ -1.35
PRPF38A-203ENST00000487160 GBP4Q96PP9 640 aa6.64□□□□□ -1.35
PRPF38A-203ENST00000487160 ZIM2Q9NZV7 527 aa6.64□□□□□ -1.35
PRPF38A-203ENST00000487160 CC2D2AQ9P2K1 1620 aa6.64□□□□□ -1.35
PRPF38A-203ENST00000487160 TSPAN6O43657 245 aa6.63□□□□□ -1.35
PRPF38A-203ENST00000487160 LRG1P02750 347 aa6.63□□□□□ -1.35
PRPF38A-203ENST00000487160 HERVK_113P62684 666 aa6.63□□□□□ -1.35
PRPF38A-203ENST00000487160 PPP2R5AQ15172 486 aa6.63□□□□□ -1.35
PRPF38A-203ENST00000487160 PCBP2Q15366 365 aaKnown RBP eCLIP6.63□□□□□ -1.35
PRPF38A-203ENST00000487160 RGL3Q3MIN7 710 aa6.63□□□□□ -1.35
PRPF38A-203ENST00000487160 ARTNQ5T4W7 220 aa6.63□□□□□ -1.35
PRPF38A-203ENST00000487160 PGM2L1Q6PCE3 622 aa6.63□□□□□ -1.35
PRPF38A-203ENST00000487160 ZC3H14Q6PJT7 736 aaKnown RBP6.63□□□□□ -1.35
PRPF38A-203ENST00000487160 CBLL1Q75N03 491 aa6.63□□□□□ -1.35
PRPF38A-203ENST00000487160 C1orf162Q8NEQ5 155 aaPredicted RBP6.63□□□□□ -1.35
PRPF38A-203ENST00000487160 LMBR1Q8WVP7 490 aa6.63□□□□□ -1.35
PRPF38A-203ENST00000487160 FAXDC2Q96IV6 333 aa6.63□□□□□ -1.35
PRPF38A-203ENST00000487160 DTLQ9NZJ0 730 aa6.63□□□□□ -1.35
PRPF38A-203ENST00000487160 OAS3Q9Y6K5 1087 aaKnown RBP6.63□□□□□ -1.35
PRPF38A-203ENST00000487160 PRAMEF22A3QJZ6 481 aa6.62□□□□□ -1.35
PRPF38A-203ENST00000487160 FZD9O00144 591 aa6.62□□□□□ -1.35
PRPF38A-203ENST00000487160 CCND1P24385 295 aa6.62□□□□□ -1.35
PRPF38A-203ENST00000487160 STAT5AP42229 794 aa6.62□□□□□ -1.35
PRPF38A-203ENST00000487160 YBX1P67809 324 aaKnown RBP6.62□□□□□ -1.35
PRPF38A-203ENST00000487160 ADCY1Q08828 1119 aa6.62□□□□□ -1.35
PRPF38A-203ENST00000487160 TMEM62Q0P6H9 643 aa6.62□□□□□ -1.35
PRPF38A-203ENST00000487160 DBPQ10586 325 aaPredicted RBP6.62□□□□□ -1.35
PRPF38A-203ENST00000487160 PIN1Q13526 163 aaPredicted RBP6.62□□□□□ -1.35
PRPF38A-203ENST00000487160 HSP90AB2PQ58FF8 381 aa6.62□□□□□ -1.35
PRPF38A-203ENST00000487160 PRAMEF18Q5VWM3 479 aa6.62□□□□□ -1.35
PRPF38A-203ENST00000487160 NME9Q86XW9 330 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms