RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 CRACR2BQ8N4Y2 399 aaPredicted RBP5.22□□□□□ -1.57
SNRNP27-204ENST00000487029 CLEC4DQ8WXI8 215 aa5.22□□□□□ -1.57
SNRNP27-204ENST00000487029 PPP1R14AQ96A00 147 aa5.22□□□□□ -1.57
SNRNP27-204ENST00000487029 NEIL1Q96FI4 390 aaPredicted RBP5.22□□□□□ -1.57
SNRNP27-204ENST00000487029 RNPC3Q96LT9 517 aaKnown RBP5.22□□□□□ -1.57
SNRNP27-204ENST00000487029 CDIP1Q9H305 208 aa5.22□□□□□ -1.57
SNRNP27-204ENST00000487029 IQCA1LA6NCM1 817 aa5.21□□□□□ -1.58
SNRNP27-204ENST00000487029 H7BY64 318 aa5.21□□□□□ -1.58
SNRNP27-204ENST00000487029 MEFVO15553 781 aaPredicted RBP5.21□□□□□ -1.58
SNRNP27-204ENST00000487029 MYO1BO43795 1136 aa5.21□□□□□ -1.58
SNRNP27-204ENST00000487029 ZNF888P0CJ79 500 aaPredicted RBP5.21□□□□□ -1.58
SNRNP27-204ENST00000487029 COMTP21964 271 aa5.21□□□□□ -1.58
SNRNP27-204ENST00000487029 SSRP1Q08945 709 aaKnown RBP5.21□□□□□ -1.58
SNRNP27-204ENST00000487029 LSAMPQ13449 338 aa5.21□□□□□ -1.58
SNRNP27-204ENST00000487029 SMAD2Q15796 467 aaKnown RBP5.21□□□□□ -1.58
SNRNP27-204ENST00000487029 RBM12BQ8IXT5 1001 aaKnown RBP5.21□□□□□ -1.58
SNRNP27-204ENST00000487029 LILRB2Q8N423 598 aa5.21□□□□□ -1.58
SNRNP27-204ENST00000487029 IL17DQ8TAD2 202 aa5.21□□□□□ -1.58
SNRNP27-204ENST00000487029 SH3TC2Q8TF17 1288 aa5.21□□□□□ -1.58
SNRNP27-204ENST00000487029 NEU4Q8WWR8 484 aaPredicted RBP5.21□□□□□ -1.58
SNRNP27-204ENST00000487029 CHAMP1Q96JM3 812 aa5.21□□□□□ -1.58
SNRNP27-204ENST00000487029 CLDND1Q9NY35 253 aa5.21□□□□□ -1.58
SNRNP27-204ENST00000487029 ASH2LQ9UBL3 628 aa5.21□□□□□ -1.58
SNRNP27-204ENST00000487029 PFDN2Q9UHV9 154 aa5.21□□□□□ -1.58
SNRNP27-204ENST00000487029 KDM2BQ8NHM5 1336 aa5.21□□□□□ -1.58
SNRNP27-204ENST00000487029 A0A087X1B8 175 aa5.2□□□□□ -1.58
SNRNP27-204ENST00000487029 AGRPO00253 132 aa5.2□□□□□ -1.58
SNRNP27-204ENST00000487029 DIAPH1O60610 1272 aaKnown RBP5.2□□□□□ -1.58
SNRNP27-204ENST00000487029 CKMP06732 381 aa5.2□□□□□ -1.58
SNRNP27-204ENST00000487029 ACO1P21399 889 aaKnown RBP5.2□□□□□ -1.58
SNRNP27-204ENST00000487029 MCM7P33993 719 aa5.2□□□□□ -1.58
SNRNP27-204ENST00000487029 GLRBP48167 497 aa5.2□□□□□ -1.58
SNRNP27-204ENST00000487029 KCNAB2Q13303 367 aa5.2□□□□□ -1.58
SNRNP27-204ENST00000487029 SV2CQ496J9 727 aa5.2□□□□□ -1.58
SNRNP27-204ENST00000487029 FNDC7Q5VTL7 733 aa5.2□□□□□ -1.58
SNRNP27-204ENST00000487029 LDLRAD3Q86YD5 345 aa5.2□□□□□ -1.58
SNRNP27-204ENST00000487029 LRRC47Q8N1G4 583 aaKnown RBP5.2□□□□□ -1.58
SNRNP27-204ENST00000487029 STPG3Q8N7X2 389 aa5.2□□□□□ -1.58
SNRNP27-204ENST00000487029 JMYQ8N9B5 988 aa5.2□□□□□ -1.58
SNRNP27-204ENST00000487029 THAP3Q8WTV1 239 aaPredicted RBP5.2□□□□□ -1.58
SNRNP27-204ENST00000487029 SGSM3Q96HU1 749 aa5.2□□□□□ -1.58
SNRNP27-204ENST00000487029 KATNBL1Q9H079 304 aa5.2□□□□□ -1.58
SNRNP27-204ENST00000487029 SMOC1Q9H4F8 434 aa5.2□□□□□ -1.58
SNRNP27-204ENST00000487029 DLL4Q9NR61 685 aa5.2□□□□□ -1.58
SNRNP27-204ENST00000487029 ENPP3O14638 875 aa5.19□□□□□ -1.58
SNRNP27-204ENST00000487029 SLC27A2O14975 620 aa5.19□□□□□ -1.58
SNRNP27-204ENST00000487029 SCG5P05408 212 aa5.19□□□□□ -1.58
SNRNP27-204ENST00000487029 SNRPB2P08579 225 aaKnown RBP5.19□□□□□ -1.58
SNRNP27-204ENST00000487029 HSD3B2P26439 372 aa5.19□□□□□ -1.58
SNRNP27-204ENST00000487029 HOXC12P31275 282 aa5.19□□□□□ -1.58
SNRNP27-204ENST00000487029 TESK1Q15569 626 aa5.19□□□□□ -1.58
SNRNP27-204ENST00000487029 C2orf27AQ580R0 203 aa5.19□□□□□ -1.58
SNRNP27-204ENST00000487029 VASNQ6EMK4 673 aa5.19□□□□□ -1.58
SNRNP27-204ENST00000487029 C1orf210Q8IVY1 113 aa5.19□□□□□ -1.58
SNRNP27-204ENST00000487029 CACTINQ8WUQ7 758 aaKnown RBP5.19□□□□□ -1.58
SNRNP27-204ENST00000487029 SPATA9Q9BWV2 254 aa5.19□□□□□ -1.58
SNRNP27-204ENST00000487029 KCND1Q9NSA2 647 aa5.19□□□□□ -1.58
SNRNP27-204ENST00000487029 ZFP69BQ9UJL9 534 aa5.19□□□□□ -1.58
SNRNP27-204ENST00000487029 DGKIO75912 1065 aa5.18□□□□□ -1.58
SNRNP27-204ENST00000487029 IL18BPO95998 194 aa5.18□□□□□ -1.58
SNRNP27-204ENST00000487029 ITGAVP06756 1048 aa5.18□□□□□ -1.58
SNRNP27-204ENST00000487029 INHBCP55103 352 aa5.18□□□□□ -1.58
SNRNP27-204ENST00000487029 NOLC1Q14978 699 aaKnown RBP eCLIP5.18□□□□□ -1.58
SNRNP27-204ENST00000487029 SKIDA1Q1XH10 827 aa5.18□□□□□ -1.58
SNRNP27-204ENST00000487029 PPIL6Q8IXY8 311 aa5.18□□□□□ -1.58
SNRNP27-204ENST00000487029 PHOSPHO1Q8TCT1 267 aa5.18□□□□□ -1.58
SNRNP27-204ENST00000487029 LARP4BQ92615 738 aaKnown RBP5.18□□□□□ -1.58
SNRNP27-204ENST00000487029 APPBP2Q92624 585 aa5.18□□□□□ -1.58
SNRNP27-204ENST00000487029 PLEKHG4BQ96PX9 1271 aa5.18□□□□□ -1.58
SNRNP27-204ENST00000487029 JAM3Q9BX67 310 aa5.18□□□□□ -1.58
SNRNP27-204ENST00000487029 EPB41L1Q9H4G0 881 aa5.18□□□□□ -1.58
SNRNP27-204ENST00000487029 KANSL2Q9H9L4 492 aa5.18□□□□□ -1.58
SNRNP27-204ENST00000487029 TMEM260Q9NX78 707 aa5.18□□□□□ -1.58
SNRNP27-204ENST00000487029 LRP2BPQ9P2M1 347 aa5.18□□□□□ -1.58
SNRNP27-204ENST00000487029 A0A1W2PQU0 124 aa5.17□□□□□ -1.58
SNRNP27-204ENST00000487029 CDC45O75419 566 aa5.17□□□□□ -1.58
SNRNP27-204ENST00000487029 RAD17O75943 681 aa5.17□□□□□ -1.58
SNRNP27-204ENST00000487029 LTFP02788 710 aa5.17□□□□□ -1.58
SNRNP27-204ENST00000487029 CHGBP05060 677 aa5.17□□□□□ -1.58
SNRNP27-204ENST00000487029 LTBRP36941 435 aa5.17□□□□□ -1.58
SNRNP27-204ENST00000487029 SQSTM1Q13501 440 aa5.17□□□□□ -1.58
SNRNP27-204ENST00000487029 LONRF2Q1L5Z9 754 aa5.17□□□□□ -1.58
SNRNP27-204ENST00000487029 RNF151Q2KHN1 245 aa5.17□□□□□ -1.58
SNRNP27-204ENST00000487029 ACBD5Q5T8D3 534 aaPredicted RBP5.17□□□□□ -1.58
SNRNP27-204ENST00000487029 EGFLAMQ63HQ2 1017 aa5.17□□□□□ -1.58
SNRNP27-204ENST00000487029 PCSK4Q6UW60 755 aa5.17□□□□□ -1.58
SNRNP27-204ENST00000487029 MAMDC4Q6UXC1 1216 aa5.17□□□□□ -1.58
SNRNP27-204ENST00000487029 ZNF627Q7L945 461 aa5.17□□□□□ -1.58
SNRNP27-204ENST00000487029 HOMER1Q86YM7 354 aa5.17□□□□□ -1.58
SNRNP27-204ENST00000487029 DNAJC10Q8IXB1 793 aa5.17□□□□□ -1.58
SNRNP27-204ENST00000487029 TTLL11Q8NHH1 800 aa5.17□□□□□ -1.58
SNRNP27-204ENST00000487029 PIP4K2CQ8TBX8 421 aa5.17□□□□□ -1.58
SNRNP27-204ENST00000487029 AGAP2Q99490 1192 aa5.17□□□□□ -1.58
SNRNP27-204ENST00000487029 FANCLQ9NW38 375 aa5.17□□□□□ -1.58
SNRNP27-204ENST00000487029 PPARGC1AQ9UBK2 798 aaKnown RBP5.17□□□□□ -1.58
SNRNP27-204ENST00000487029 PTCH2Q9Y6C5 1203 aa5.17□□□□□ -1.58
SNRNP27-204ENST00000487029 ESYT3A0FGR9 886 aa5.16□□□□□ -1.58
SNRNP27-204ENST00000487029 MATN2O00339 956 aa5.16□□□□□ -1.58
SNRNP27-204ENST00000487029 ADCY3O60266 1144 aa5.16□□□□□ -1.58
SNRNP27-204ENST00000487029 FBXO21O94952 628 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms