RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 SDF4Q9BRK5 362 aa28.03■■■□□ 2.08
LIME1-206ENST00000487026 IFIH1Q9BYX4 1025 aaKnown RBP28.03■■■□□ 2.08
LIME1-206ENST00000487026 AGO4Q9HCK5 861 aaKnown RBP28.03■■■□□ 2.08
LIME1-206ENST00000487026 TUBE1Q9UJT0 475 aa28.03■■■□□ 2.08
LIME1-206ENST00000487026 GHRP10912 638 aa28.02■■■□□ 2.08
LIME1-206ENST00000487026 INSRRP14616 1297 aa28.02■■■□□ 2.08
LIME1-206ENST00000487026 ZNF76P36508 570 aa28.02■■■□□ 2.08
LIME1-206ENST00000487026 ACTR2P61160 394 aa28.02■■■□□ 2.08
LIME1-206ENST00000487026 HTRA4P83105 476 aaPredicted RBP28.02■■■□□ 2.08
LIME1-206ENST00000487026 PFKFB3Q16875 520 aaPredicted RBP28.02■■■□□ 2.08
LIME1-206ENST00000487026 TAF2Q6P1X5 1199 aa28.02■■■□□ 2.08
LIME1-206ENST00000487026 DNAJB3Q8WWF6 145 aa28.02■■■□□ 2.08
LIME1-206ENST00000487026 TOP1MTQ969P6 601 aa28.02■■■□□ 2.08
LIME1-206ENST00000487026 C17orf80Q9BSJ5 609 aa28.02■■■□□ 2.08
LIME1-206ENST00000487026 MEIS1O00470 390 aa28.01■■■□□ 2.07
LIME1-206ENST00000487026 PPFIA3O75145 1194 aa28.01■■■□□ 2.07
LIME1-206ENST00000487026 SREBF1P36956 1147 aa28.01■■■□□ 2.07
LIME1-206ENST00000487026 IL27Q8NEV9 243 aa28.01■■■□□ 2.07
LIME1-206ENST00000487026 UIMC1Q96RL1 719 aa28.01■■■□□ 2.07
LIME1-206ENST00000487026 AZI2Q9H6S1 392 aa28.01■■■□□ 2.07
LIME1-206ENST00000487026 COL4A4P53420 1690 aaPredicted RBP28■■■□□ 2.07
LIME1-206ENST00000487026 NFASCO94856 1347 aa28■■■□□ 2.07
LIME1-206ENST00000487026 CCDC196A0A1B0GTZ2 297 aa28■■■□□ 2.07
LIME1-206ENST00000487026 MBLAC1A4D2B0 266 aaPredicted RBP28■■■□□ 2.07
LIME1-206ENST00000487026 TNFRSF10AO00220 468 aa28■■■□□ 2.07
LIME1-206ENST00000487026 SCG2P13521 617 aa28■■■□□ 2.07
LIME1-206ENST00000487026 RPS6KB1P23443 525 aa28■■■□□ 2.07
LIME1-206ENST00000487026 KCNQ1P51787 676 aa28■■■□□ 2.07
LIME1-206ENST00000487026 MGAT3Q09327 533 aa28■■■□□ 2.07
LIME1-206ENST00000487026 AP3B2Q13367 1082 aa28■■■□□ 2.07
LIME1-206ENST00000487026 RPAINQ86UA6 219 aa28■■■□□ 2.07
LIME1-206ENST00000487026 RSPH3Q86UC2 560 aa28■■■□□ 2.07
LIME1-206ENST00000487026 TEX2Q8IWB9 1127 aa28■■■□□ 2.07
LIME1-206ENST00000487026 APBB2Q92870 758 aa28■■■□□ 2.07
LIME1-206ENST00000487026 GLT8D2Q9H1C3 349 aa28■■■□□ 2.07
LIME1-206ENST00000487026 TRPC6Q9Y210 931 aa28■■■□□ 2.07
LIME1-206ENST00000487026 MUC3AQ02505 3323 aa27.99■■■□□ 2.07
LIME1-206ENST00000487026 DDX39AO00148 427 aaKnown RBP27.99■■■□□ 2.07
LIME1-206ENST00000487026 LPIN1Q14693 890 aa27.99■■■□□ 2.07
LIME1-206ENST00000487026 PLCB4Q15147 1175 aa27.99■■■□□ 2.07
LIME1-206ENST00000487026 PKN1Q16512 942 aa27.99■■■□□ 2.07
LIME1-206ENST00000487026 TRAPPC12Q8WVT3 735 aa27.99■■■□□ 2.07
LIME1-206ENST00000487026 PHKBQ93100 1093 aa27.99■■■□□ 2.07
LIME1-206ENST00000487026 YME1L1Q96TA2 773 aa27.99■■■□□ 2.07
LIME1-206ENST00000487026 FAM49AQ9H0Q0 323 aaPredicted RBP27.99■■■□□ 2.07
LIME1-206ENST00000487026 FAM86B1E9PN63 330 aa27.98■■■□□ 2.07
LIME1-206ENST00000487026 FAM86B2P0C5J1 330 aa27.98■■■□□ 2.07
LIME1-206ENST00000487026 BMP1P13497 986 aa27.98■■■□□ 2.07
LIME1-206ENST00000487026 STAT5BP51692 787 aa27.98■■■□□ 2.07
LIME1-206ENST00000487026 FBXO22Q8NEZ5 403 aa27.98■■■□□ 2.07
LIME1-206ENST00000487026 SP7Q8TDD2 431 aaPredicted RBP27.98■■■□□ 2.07
LIME1-206ENST00000487026 UHRF1Q96T88 793 aaPredicted RBP27.98■■■□□ 2.07
LIME1-206ENST00000487026 CDY2AQ9Y6F7 541 aa27.98■■■□□ 2.07
LIME1-206ENST00000487026 TCF20Q9UGU0 1960 aaKnown RBP27.97■■■□□ 2.07
LIME1-206ENST00000487026 RRN3P2A6NIE6 340 aa27.97■■■□□ 2.07
LIME1-206ENST00000487026 PRPF3O43395 683 aaKnown RBP27.97■■■□□ 2.07
LIME1-206ENST00000487026 PLPPR4Q7Z2D5 763 aa27.97■■■□□ 2.07
LIME1-206ENST00000487026 PLA2G4DQ86XP0 818 aa27.97■■■□□ 2.07
LIME1-206ENST00000487026 NECAB3Q96P71 396 aaPredicted RBP27.97■■■□□ 2.07
LIME1-206ENST00000487026 LMCD1Q9NZU5 365 aa27.97■■■□□ 2.07
LIME1-206ENST00000487026 ATG7O95352 703 aa27.96■■■□□ 2.07
LIME1-206ENST00000487026 CCNE2O96020 404 aa27.96■■■□□ 2.07
LIME1-206ENST00000487026 TMEM62Q0P6H9 643 aa27.96■■■□□ 2.07
LIME1-206ENST00000487026 HLA-CQ95604 372 aa27.96■■■□□ 2.07
LIME1-206ENST00000487026 ZMYND12Q9H0C1 365 aa27.96■■■□□ 2.07
LIME1-206ENST00000487026 C6orf50Q9HD87 102 aa27.96■■■□□ 2.07
LIME1-206ENST00000487026 REC8O95072 547 aa27.95■■■□□ 2.06
LIME1-206ENST00000487026 MRPS6P82932 125 aaKnown RBP27.95■■■□□ 2.06
LIME1-206ENST00000487026 AAK1Q2M2I8 961 aa27.95■■■□□ 2.06
LIME1-206ENST00000487026 FBXO47Q5MNV8 452 aa27.95■■■□□ 2.06
LIME1-206ENST00000487026 COG5Q9UP83 839 aa27.95■■■□□ 2.06
LIME1-206ENST00000487026 SIP14410 1827 aa27.95■■■□□ 2.06
LIME1-206ENST00000487026 ENPP3O14638 875 aa27.94■■■□□ 2.06
LIME1-206ENST00000487026 PSMA5P28066 241 aa27.94■■■□□ 2.06
LIME1-206ENST00000487026 CCT2P78371 535 aaKnown RBP27.94■■■□□ 2.06
LIME1-206ENST00000487026 EPC2Q52LR7 807 aa27.94■■■□□ 2.06
LIME1-206ENST00000487026 ABHD15Q6UXT9 468 aa27.94■■■□□ 2.06
LIME1-206ENST00000487026 NIPA1Q7RTP0 329 aa27.94■■■□□ 2.06
LIME1-206ENST00000487026 FBXL16Q8N461 479 aa27.94■■■□□ 2.06
LIME1-206ENST00000487026 CRYGNQ8WXF5 182 aa27.94■■■□□ 2.06
LIME1-206ENST00000487026 AGXT2Q9BYV1 514 aa27.94■■■□□ 2.06
LIME1-206ENST00000487026 AGO3Q9H9G7 860 aaKnown RBP27.94■■■□□ 2.06
LIME1-206ENST00000487026 NCOA5Q9HCD5 579 aaKnown RBP27.94■■■□□ 2.06
LIME1-206ENST00000487026 IGLV3-22A0A075B6J6 115 aa27.93■■■□□ 2.06
LIME1-206ENST00000487026 ESYT2A0FGR8 921 aa27.93■■■□□ 2.06
LIME1-206ENST00000487026 POTEB3A0JP26 581 aa27.93■■■□□ 2.06
LIME1-206ENST00000487026 BACH1O14867 736 aa27.93■■■□□ 2.06
LIME1-206ENST00000487026 DHX15O43143 795 aaKnown RBP27.93■■■□□ 2.06
LIME1-206ENST00000487026 CYP3A4P08684 503 aa27.93■■■□□ 2.06
LIME1-206ENST00000487026 CD52P31358 61 aa27.93■■■□□ 2.06
LIME1-206ENST00000487026 AKAP17AQ02040 695 aaKnown RBP27.93■■■□□ 2.06
LIME1-206ENST00000487026 NTRK3Q16288 839 aa27.93■■■□□ 2.06
LIME1-206ENST00000487026 POTEBQ6S5H4 581 aa27.93■■■□□ 2.06
LIME1-206ENST00000487026 REXO1Q8N1G1 1221 aaKnown RBP27.93■■■□□ 2.06
LIME1-206ENST00000487026 RASGRP4Q8TDF6 673 aa27.93■■■□□ 2.06
LIME1-206ENST00000487026 TNPO1Q92973 898 aaKnown RBP27.93■■■□□ 2.06
LIME1-206ENST00000487026 SLC26A6Q9BXS9 759 aa27.93■■■□□ 2.06
LIME1-206ENST00000487026 PCDHA2Q9Y5H9 948 aa27.93■■■□□ 2.06
LIME1-206ENST00000487026 NID2Q14112 1375 aa27.93■■■□□ 2.06
LIME1-206ENST00000487026 IGKV6D-21A0A0A0MT36 114 aa27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms