RNA–Protein interactions for RNA: ENST00000486255.1

GABRE-209, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 6,176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-209ENST00000486255 FBXO38Q6PIJ6 1188 aa9.43□□□□□ -0.9
GABRE-209ENST00000486255 NEK8Q86SG6 692 aa9.43□□□□□ -0.9
GABRE-209ENST00000486255 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.43□□□□□ -0.9
GABRE-209ENST00000486255 NUDCD1Q96RS6 583 aa9.43□□□□□ -0.9
GABRE-209ENST00000486255 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.43□□□□□ -0.9
GABRE-209ENST00000486255 ASCC2Q9H1I8 757 aaPredicted RBP9.43□□□□□ -0.9
GABRE-209ENST00000486255 ARHGAP26Q9UNA1 814 aa9.43□□□□□ -0.9
GABRE-209ENST00000486255 APOBEC2Q9Y235 224 aaKnown RBP9.43□□□□□ -0.9
GABRE-209ENST00000486255 PCDHA13Q9Y5I0 950 aa9.43□□□□□ -0.9
GABRE-209ENST00000486255 OVOS2A0A0J9YW53 1432 aa9.43□□□□□ -0.9
GABRE-209ENST00000486255 OVOS2Q6IE36 1432 aa9.43□□□□□ -0.9
GABRE-209ENST00000486255 hCG_1642624A0A1W2PR95 340 aa9.43□□□□□ -0.9
GABRE-209ENST00000486255 SMCO2A6NFE2 343 aa9.43□□□□□ -0.9
GABRE-209ENST00000486255 OLFML2BQ68BL8 750 aa9.43□□□□□ -0.9
GABRE-209ENST00000486255 ANGPTL8Q6UXH0 198 aa9.43□□□□□ -0.9
GABRE-209ENST00000486255 HOMEZQ8IX15 550 aa9.43□□□□□ -0.9
GABRE-209ENST00000486255 ZNF653Q96CK0 615 aa9.43□□□□□ -0.9
GABRE-209ENST00000486255 XAGE2Q96GT9 111 aa9.43□□□□□ -0.9
GABRE-209ENST00000486255 RBM17Q96I25 401 aaKnown RBP9.43□□□□□ -0.9
GABRE-209ENST00000486255 CLIC4Q9Y696 253 aa9.43□□□□□ -0.9
GABRE-209ENST00000486255 ZMYM6O95789 1325 aa9.43□□□□□ -0.9
GABRE-209ENST00000486255 NCAPD2Q15021 1401 aa9.43□□□□□ -0.9
GABRE-209ENST00000486255 CFAP73A6NFT4 308 aa9.43□□□□□ -0.9
GABRE-209ENST00000486255 STXBP3O00186 592 aa9.43□□□□□ -0.9
GABRE-209ENST00000486255 DTNBO60941 627 aa9.43□□□□□ -0.9
GABRE-209ENST00000486255 ESRRBO95718 433 aa9.43□□□□□ -0.9
GABRE-209ENST00000486255 TAC1P20366 129 aa9.43□□□□□ -0.9
GABRE-209ENST00000486255 BRDTQ58F21 947 aaPredicted RBP9.43□□□□□ -0.9
GABRE-209ENST00000486255 ACAD11Q709F0 780 aa9.43□□□□□ -0.9
GABRE-209ENST00000486255 ARHGEF25Q86VW2 580 aa9.43□□□□□ -0.9
GABRE-209ENST00000486255 CATSPER3Q86XQ3 398 aa9.43□□□□□ -0.9
GABRE-209ENST00000486255 NOSTRINQ8IVI9 506 aa9.43□□□□□ -0.9
GABRE-209ENST00000486255 ACRBPQ8NEB7 543 aa9.43□□□□□ -0.9
GABRE-209ENST00000486255 RPS6KC1Q96S38 1066 aa9.43□□□□□ -0.9
GABRE-209ENST00000486255 UBN1Q9NPG3 1134 aa9.43□□□□□ -0.9
GABRE-209ENST00000486255 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.43□□□□□ -0.95e-8■□□□□ 9.7
GABRE-209ENST00000486255 HESX1Q9UBX0 185 aa9.43□□□□□ -0.9
GABRE-209ENST00000486255 GAS7O60861 476 aa9.43□□□□□ -0.9
GABRE-209ENST00000486255 EFCAB14O75071 495 aa9.43□□□□□ -0.9
GABRE-209ENST00000486255 KITP10721 976 aa9.43□□□□□ -0.9
GABRE-209ENST00000486255 VCAM1P19320 739 aa9.43□□□□□ -0.9
GABRE-209ENST00000486255 PDCLQ13371 301 aa9.43□□□□□ -0.9
GABRE-209ENST00000486255 PCGF5Q86SE9 256 aa9.43□□□□□ -0.9
GABRE-209ENST00000486255 NHEJ1Q9H9Q4 299 aaPredicted RBP9.43□□□□□ -0.9
GABRE-209ENST00000486255 KLC4Q9NSK0 619 aa9.43□□□□□ -0.9
GABRE-209ENST00000486255 CDV3Q9UKY7 258 aaKnown RBP9.43□□□□□ -0.9
GABRE-209ENST00000486255 LRRC7Q96NW7 1537 aa9.43□□□□□ -0.9
GABRE-209ENST00000486255 MYO1FO00160 1098 aa9.42□□□□□ -0.9
GABRE-209ENST00000486255 CTIFO43310 598 aaKnown RBP9.42□□□□□ -0.9
GABRE-209ENST00000486255 DLATP10515 647 aaKnown RBP9.42□□□□□ -0.9
GABRE-209ENST00000486255 TMED10P49755 219 aaKnown RBP9.42□□□□□ -0.9
GABRE-209ENST00000486255 DYNLT1P63172 113 aa9.42□□□□□ -0.9
GABRE-209ENST00000486255 CEP78Q5JTW2 689 aa9.42□□□□□ -0.9
GABRE-209ENST00000486255 C10orf76Q5T2E6 689 aa9.42□□□□□ -0.9
GABRE-209ENST00000486255 ARMCX5Q6P1M9 558 aa9.42□□□□□ -0.9
GABRE-209ENST00000486255 TRAF7Q6Q0C0 670 aa9.42□□□□□ -0.9
GABRE-209ENST00000486255 REXO1Q8N1G1 1221 aaKnown RBP9.42□□□□□ -0.9
GABRE-209ENST00000486255 KCTD6Q8NC69 237 aa9.42□□□□□ -0.9
GABRE-209ENST00000486255 ZC3H12CQ9C0D7 883 aaKnown RBP9.42□□□□□ -0.9
GABRE-209ENST00000486255 GINM1Q9NU53 330 aa9.42□□□□□ -0.9
GABRE-209ENST00000486255 STK17AQ9UEE5 414 aa9.42□□□□□ -0.9
GABRE-209ENST00000486255 SFMBT1Q9UHJ3 866 aa9.42□□□□□ -0.9
GABRE-209ENST00000486255 PTK2Q05397 1052 aa9.42□□□□□ -0.9
GABRE-209ENST00000486255 CAPRIN1Q14444 709 aaKnown RBP9.42□□□□□ -0.9
GABRE-209ENST00000486255 DNAAF3Q8N9W5 541 aa9.42□□□□□ -0.9
GABRE-209ENST00000486255 PARD3BQ8TEW8 1205 aa9.42□□□□□ -0.9
GABRE-209ENST00000486255 SYMPKQ92797 1274 aaKnown RBP9.42□□□□□ -0.9
GABRE-209ENST00000486255 CLIC6Q96NY7 704 aa9.42□□□□□ -0.9
GABRE-209ENST00000486255 TUBGCP2Q9BSJ2 902 aa9.42□□□□□ -0.9
GABRE-209ENST00000486255 AP1M1Q9BXS5 423 aa9.42□□□□□ -0.9
GABRE-209ENST00000486255 TRIM33Q9UPN9 1127 aa9.42□□□□□ -0.9
GABRE-209ENST00000486255 LPXNO60711 386 aa9.42□□□□□ -0.9
GABRE-209ENST00000486255 WDR47O94967 919 aa9.42□□□□□ -0.9
GABRE-209ENST00000486255 HSPA6P17066 643 aa9.42□□□□□ -0.9
GABRE-209ENST00000486255 PPP4R4Q6NUP7 873 aa9.42□□□□□ -0.9
GABRE-209ENST00000486255 SPDYE1Q8NFV5 336 aaPredicted RBP9.42□□□□□ -0.9
GABRE-209ENST00000486255 ZFYVE19Q96K21 471 aa9.42□□□□□ -0.9
GABRE-209ENST00000486255 EYA3Q99504 573 aa9.42□□□□□ -0.9
GABRE-209ENST00000486255 AATFQ9NY61 560 aaKnown RBP eCLIP9.42□□□□□ -0.9
GABRE-209ENST00000486255 PRKAG2Q9UGJ0 569 aa9.42□□□□□ -0.9
GABRE-209ENST00000486255 PCDHA7Q9UN72 937 aa9.42□□□□□ -0.9
GABRE-209ENST00000486255 NCOA3Q9Y6Q9 1424 aa9.42□□□□□ -0.9
GABRE-209ENST00000486255 PDE6BP35913 854 aa9.42□□□□□ -0.9
GABRE-209ENST00000486255 HABP4Q5JVS0 413 aaKnown RBP9.42□□□□□ -0.9
GABRE-209ENST00000486255 SPOUT1Q5T280 376 aaKnown RBP9.42□□□□□ -0.9
GABRE-209ENST00000486255 CENPUQ71F23 418 aa9.42□□□□□ -0.9
GABRE-209ENST00000486255 BLIDQ8IZY5 108 aa9.42□□□□□ -0.9
GABRE-209ENST00000486255 MTBPQ96DY7 904 aa9.42□□□□□ -0.9
GABRE-209ENST00000486255 FAM161BQ96MY7 647 aa9.42□□□□□ -0.9
GABRE-209ENST00000486255 NFU1Q9UMS0 254 aa9.42□□□□□ -0.9
GABRE-209ENST00000486255 HAUS5O94927 633 aa9.42□□□□□ -0.9
GABRE-209ENST00000486255 CA4P22748 312 aa9.42□□□□□ -0.9
GABRE-209ENST00000486255 SOX5P35711 763 aa9.42□□□□□ -0.9
GABRE-209ENST00000486255 BPIFB4P59827 614 aa9.42□□□□□ -0.9
GABRE-209ENST00000486255 TMPRSS15P98073 1019 aa9.42□□□□□ -0.9
GABRE-209ENST00000486255 TBCCQ15814 346 aa9.42□□□□□ -0.9
GABRE-209ENST00000486255 EPM2AIP1Q7L775 607 aaPredicted RBP9.42□□□□□ -0.9
GABRE-209ENST00000486255 NLRP14Q86W24 1093 aa9.42□□□□□ -0.9
GABRE-209ENST00000486255 TTC17Q96AE7 1141 aa9.42□□□□□ -0.9
GABRE-209ENST00000486255 STAMBPL1Q96FJ0 436 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms