RNA–Protein interactions for RNA: ENST00000486116.5

PTPN7-213, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-213ENST00000486116 PLPP4Q5VZY2 271 aa11.33□□□□□ -0.6
PTPN7-213ENST00000486116 RUFY4Q6ZNE9 571 aa11.33□□□□□ -0.6
PTPN7-213ENST00000486116 SIX5Q8N196 739 aa11.33□□□□□ -0.6
PTPN7-213ENST00000486116 APPBP2Q92624 585 aa11.33□□□□□ -0.6
PTPN7-213ENST00000486116 ADAM7Q9H2U9 754 aa11.33□□□□□ -0.6
PTPN7-213ENST00000486116 BCAS3Q9H6U6 928 aa11.33□□□□□ -0.6
PTPN7-213ENST00000486116 AGO3Q9H9G7 860 aaKnown RBP11.33□□□□□ -0.6
PTPN7-213ENST00000486116 HCSTQ9UBK5 93 aa11.33□□□□□ -0.6
PTPN7-213ENST00000486116 PATL2C9JE40 543 aaKnown RBP11.32□□□□□ -0.6
PTPN7-213ENST00000486116 GNAT2P19087 354 aa11.32□□□□□ -0.6
PTPN7-213ENST00000486116 SDHBP21912 280 aa11.32□□□□□ -0.6
PTPN7-213ENST00000486116 UBA1P22314 1058 aaKnown RBP11.32□□□□□ -0.6
PTPN7-213ENST00000486116 ARHGAP4P98171 946 aa11.32□□□□□ -0.6
PTPN7-213ENST00000486116 ARHGEF16Q5VV41 709 aa11.32□□□□□ -0.6
PTPN7-213ENST00000486116 PDE12Q6L8Q7 609 aaKnown RBP11.32□□□□□ -0.6
PTPN7-213ENST00000486116 ZC3H14Q6PJT7 736 aaKnown RBP11.32□□□□□ -0.6
PTPN7-213ENST00000486116 GPKOWQ92917 476 aaPredicted RBP eCLIP11.32□□□□□ -0.6
PTPN7-213ENST00000486116 TMEM47Q9BQJ4 181 aa11.32□□□□□ -0.6
PTPN7-213ENST00000486116 PXMP2Q9NR77 195 aa11.32□□□□□ -0.6
PTPN7-213ENST00000486116 TMEM260Q9NX78 707 aa11.32□□□□□ -0.6
PTPN7-213ENST00000486116 PCDHB12Q9Y5F1 795 aa11.32□□□□□ -0.6
PTPN7-213ENST00000486116 CCDC171Q6TFL3 1326 aa11.32□□□□□ -0.6
PTPN7-213ENST00000486116 SLC3A2P08195 630 aaKnown RBP11.31□□□□□ -0.6
PTPN7-213ENST00000486116 PDHBP11177 359 aa11.31□□□□□ -0.6
PTPN7-213ENST00000486116 GNAT1P11488 350 aa11.31□□□□□ -0.6
PTPN7-213ENST00000486116 RLBP1P12271 317 aa11.31□□□□□ -0.6
PTPN7-213ENST00000486116 CD52P31358 61 aa11.31□□□□□ -0.6
PTPN7-213ENST00000486116 MTHFRP42898 656 aa11.31□□□□□ -0.6
PTPN7-213ENST00000486116 CTDSPL2Q05D32 466 aa11.31□□□□□ -0.6
PTPN7-213ENST00000486116 ITIH3Q06033 890 aa11.31□□□□□ -0.6
PTPN7-213ENST00000486116 ZNF543Q08ER8 600 aa11.31□□□□□ -0.6
PTPN7-213ENST00000486116 TPRNQ4KMQ1 711 aa11.31□□□□□ -0.6
PTPN7-213ENST00000486116 ZKSCAN2Q63HK3 967 aa11.31□□□□□ -0.6
PTPN7-213ENST00000486116 CES5AQ6NT32 575 aa11.31□□□□□ -0.6
PTPN7-213ENST00000486116 TSHZ1Q6ZSZ6 1077 aa11.31□□□□□ -0.6
PTPN7-213ENST00000486116 TRIM50Q86XT4 487 aa11.31□□□□□ -0.6
PTPN7-213ENST00000486116 ITPRIPQ8IWB1 547 aa11.31□□□□□ -0.6
PTPN7-213ENST00000486116 FEZF2Q8TBJ5 459 aa11.31□□□□□ -0.6
PTPN7-213ENST00000486116 CASP10Q92851 521 aa11.31□□□□□ -0.6
PTPN7-213ENST00000486116 MAF1Q9H063 256 aa11.31□□□□□ -0.6
PTPN7-213ENST00000486116 FBXL21Q9UKT6 434 aa11.31□□□□□ -0.6
PTPN7-213ENST00000486116 CDV3Q9UKY7 258 aaKnown RBP11.31□□□□□ -0.6
PTPN7-213ENST00000486116 DUSP12Q9UNI6 340 aa11.31□□□□□ -0.6
PTPN7-213ENST00000486116 FRYQ5TBA9 3013 aa11.31□□□□□ -0.6
PTPN7-213ENST00000486116 ABCB11O95342 1321 aa11.31□□□□□ -0.6
PTPN7-213ENST00000486116 CEP295Q9C0D2 2601 aa11.3□□□□□ -0.6
PTPN7-213ENST00000486116 TOP1P11387 765 aaKnown RBP11.3□□□□□ -0.6
PTPN7-213ENST00000486116 SCG2P13521 617 aa11.3□□□□□ -0.6
PTPN7-213ENST00000486116 TDGQ13569 410 aa11.3□□□□□ -0.6
PTPN7-213ENST00000486116 SPOUT1Q5T280 376 aaKnown RBP11.3□□□□□ -0.6
PTPN7-213ENST00000486116 KANK3Q6NY19 840 aa11.3□□□□□ -0.6
PTPN7-213ENST00000486116 THNSL1Q8IYQ7 743 aa11.3□□□□□ -0.6
PTPN7-213ENST00000486116 PLCD3Q8N3E9 789 aa11.3□□□□□ -0.6
PTPN7-213ENST00000486116 COLGALT1Q8NBJ5 622 aa11.3□□□□□ -0.6
PTPN7-213ENST00000486116 TCF25Q9BQ70 676 aa11.3□□□□□ -0.6
PTPN7-213ENST00000486116 RTKNQ9BST9 563 aa11.3□□□□□ -0.6
PTPN7-213ENST00000486116 CPVLQ9H3G5 476 aa11.3□□□□□ -0.6
PTPN7-213ENST00000486116 CYP26B1Q9NR63 512 aa11.3□□□□□ -0.6
PTPN7-213ENST00000486116 SH2B1Q9NRF2 756 aaPredicted RBP11.3□□□□□ -0.6
PTPN7-213ENST00000486116 RNF216Q9NWF9 866 aaPredicted RBP11.3□□□□□ -0.6
PTPN7-213ENST00000486116 USTQ9Y2C2 406 aa11.3□□□□□ -0.6
PTPN7-213ENST00000486116 TELO2Q9Y4R8 837 aa11.3□□□□□ -0.6
PTPN7-213ENST00000486116 HCFC2Q9Y5Z7 792 aa11.3□□□□□ -0.6
PTPN7-213ENST00000486116 CDY2AQ9Y6F7 541 aa11.3□□□□□ -0.6
PTPN7-213ENST00000486116 SPEGQ15772 3267 aa11.29□□□□□ -0.6
PTPN7-213ENST00000486116 KRBA1A5PL33 1030 aa11.29□□□□□ -0.6
PTPN7-213ENST00000486116 RNF113AO15541 343 aaKnown RBP11.29□□□□□ -0.6
PTPN7-213ENST00000486116 NARSO43776 548 aaKnown RBP11.29□□□□□ -0.6
PTPN7-213ENST00000486116 RANBP6O60518 1105 aaKnown RBP11.29□□□□□ -0.6
PTPN7-213ENST00000486116 EOMESO95936 686 aa11.29□□□□□ -0.6
PTPN7-213ENST00000486116 STAG3L1P0CL83 205 aa11.29□□□□□ -0.6
PTPN7-213ENST00000486116 SNHG28P0DPA3 235 aa11.29□□□□□ -0.6
PTPN7-213ENST00000486116 MYCLP12524 364 aaPredicted RBP11.29□□□□□ -0.6
PTPN7-213ENST00000486116 COL9A3Q14050 684 aaPredicted RBP11.29□□□□□ -0.6
PTPN7-213ENST00000486116 VARS2Q5ST30 1063 aaKnown RBP11.29□□□□□ -0.6
PTPN7-213ENST00000486116 RARS2Q5T160 578 aaKnown RBP11.29□□□□□ -0.6
PTPN7-213ENST00000486116 KIAA1841Q6NSI8 718 aa11.29□□□□□ -0.6
PTPN7-213ENST00000486116 KCNV1Q6PIU1 500 aa11.29□□□□□ -0.6
PTPN7-213ENST00000486116 C12orf76Q8N812 135 aaPredicted RBP11.29□□□□□ -0.6
PTPN7-213ENST00000486116 KBTBD3Q8NAB2 608 aa11.29□□□□□ -0.6
PTPN7-213ENST00000486116 IL31RAQ8NI17 732 aa11.29□□□□□ -0.6
PTPN7-213ENST00000486116 PDCD2LQ9BRP1 358 aa11.29□□□□□ -0.6
PTPN7-213ENST00000486116 NACAP1Q9BZK3 213 aa11.29□□□□□ -0.6
PTPN7-213ENST00000486116 NAPBQ9H115 298 aa11.29□□□□□ -0.6
PTPN7-213ENST00000486116 MLXIPQ9HAP2 919 aa11.29□□□□□ -0.6
PTPN7-213ENST00000486116 ENTPD7Q9NQZ7 604 aa11.29□□□□□ -0.6
PTPN7-213ENST00000486116 AAASQ9NRG9 546 aa11.29□□□□□ -0.6
PTPN7-213ENST00000486116 DLGAP2Q9P1A6 1054 aa11.29□□□□□ -0.6
PTPN7-213ENST00000486116 NCDNQ9UBB6 729 aa11.29□□□□□ -0.6
PTPN7-213ENST00000486116 LZTS1Q9Y250 596 aa11.29□□□□□ -0.6
PTPN7-213ENST00000486116 ZZEF1O43149 2961 aa11.28□□□□□ -0.6
PTPN7-213ENST00000486116 LAMA4Q16363 1823 aa11.28□□□□□ -0.6
PTPN7-213ENST00000486116 DOCK8Q8NF50 2099 aa11.28□□□□□ -0.6
PTPN7-213ENST00000486116 POTEMA6NI47 508 aa11.28□□□□□ -0.6
PTPN7-213ENST00000486116 PRR5-ARHGAP8B1AHC4 643 aa11.28□□□□□ -0.6
PTPN7-213ENST00000486116 FOXP2O15409 715 aa11.28□□□□□ -0.6
PTPN7-213ENST00000486116 HSPD1P10809 573 aaKnown RBP11.28□□□□□ -0.6
PTPN7-213ENST00000486116 ARHGAP8P85298 464 aa11.28□□□□□ -0.6
PTPN7-213ENST00000486116 TBC1D8BQ0IIM8 1120 aa11.28□□□□□ -0.6
PTPN7-213ENST00000486116 CDC37Q16543 378 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms