RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 BRINP1O60477 761 aa8.31□□□□□ -1.08
RTN4-214ENST00000486085 ATF2P15336 505 aa8.31□□□□□ -1.08
RTN4-214ENST00000486085 PFKLP17858 780 aa8.31□□□□□ -1.08
RTN4-214ENST00000486085 CDK11BP21127 795 aaKnown RBP8.31□□□□□ -1.08
RTN4-214ENST00000486085 CDKN1CP49918 316 aaPredicted RBP8.31□□□□□ -1.08
RTN4-214ENST00000486085 NKX3-2P78367 333 aa8.31□□□□□ -1.08
RTN4-214ENST00000486085 OCRLQ01968 901 aa8.31□□□□□ -1.08
RTN4-214ENST00000486085 CR1LQ2VPA4 569 aa8.31□□□□□ -1.08
RTN4-214ENST00000486085 C11orf74Q86VG3 221 aa8.31□□□□□ -1.08
RTN4-214ENST00000486085 WDR66Q8TBY9 1149 aa8.31□□□□□ -1.08
RTN4-214ENST00000486085 MZB1Q8WU39 189 aa8.31□□□□□ -1.08
RTN4-214ENST00000486085 ELF4Q99607 663 aaPredicted RBP8.31□□□□□ -1.08
RTN4-214ENST00000486085 TOMM22Q9NS69 142 aa8.31□□□□□ -1.08
RTN4-214ENST00000486085 FAN1Q9Y2M0 1017 aa8.31□□□□□ -1.08
RTN4-214ENST00000486085 LOC100996750A0A140TA64 210 aa8.3□□□□□ -1.08
RTN4-214ENST00000486085 SEMA7AO75326 666 aa8.3□□□□□ -1.08
RTN4-214ENST00000486085 C8BP07358 591 aa8.3□□□□□ -1.08
RTN4-214ENST00000486085 ATP13A4Q4VNC1 1196 aa8.3□□□□□ -1.08
RTN4-214ENST00000486085 CC2D1AQ6P1N0 951 aaPredicted RBP8.3□□□□□ -1.08
RTN4-214ENST00000486085 ZC3H18Q86VM9 953 aaKnown RBP8.3□□□□□ -1.08
RTN4-214ENST00000486085 PASD1Q8IV76 773 aa8.3□□□□□ -1.08
RTN4-214ENST00000486085 EFHBQ8N7U6 833 aa8.3□□□□□ -1.08
RTN4-214ENST00000486085 PRPF38AQ8NAV1 312 aaKnown RBP8.3□□□□□ -1.08
RTN4-214ENST00000486085 CPA5Q8WXQ8 436 aa8.3□□□□□ -1.08
RTN4-214ENST00000486085 KRTAP4-6Q9BYQ5 205 aa8.3□□□□□ -1.08
RTN4-214ENST00000486085 RNF38Q9H0F5 515 aa8.3□□□□□ -1.08
RTN4-214ENST00000486085 GCM1Q9NP62 436 aa8.3□□□□□ -1.08
RTN4-214ENST00000486085 ACSS2Q9NR19 701 aa8.3□□□□□ -1.08
RTN4-214ENST00000486085 RBPJLQ9UBG7 517 aa8.3□□□□□ -1.08
RTN4-214ENST00000486085 SPO11Q9Y5K1 396 aa8.3□□□□□ -1.08
RTN4-214ENST00000486085 RSF1Q96T23 1441 aaPredicted RBP8.29□□□□□ -1.08
RTN4-214ENST00000486085 N4BP3O15049 544 aa8.29□□□□□ -1.08
RTN4-214ENST00000486085 FOXP2O15409 715 aa8.29□□□□□ -1.08
RTN4-214ENST00000486085 TGM5O43548 720 aa8.29□□□□□ -1.08
RTN4-214ENST00000486085 DLG4P78352 724 aa8.29□□□□□ -1.08
RTN4-214ENST00000486085 TMPRSS15P98073 1019 aa8.29□□□□□ -1.08
RTN4-214ENST00000486085 SYDE1Q6ZW31 735 aaPredicted RBP8.29□□□□□ -1.08
RTN4-214ENST00000486085 IGDCC3Q8IVU1 814 aa8.29□□□□□ -1.08
RTN4-214ENST00000486085 SMARCC2Q8TAQ2 1214 aa8.29□□□□□ -1.08
RTN4-214ENST00000486085 SYT3Q9BQG1 590 aa8.29□□□□□ -1.08
RTN4-214ENST00000486085 EMC7Q9NPA0 242 aa8.29□□□□□ -1.08
RTN4-214ENST00000486085 NGRNQ9NPE2 291 aaKnown RBP8.29□□□□□ -1.08
RTN4-214ENST00000486085 APOBEC2Q9Y235 224 aaKnown RBP8.29□□□□□ -1.08
RTN4-214ENST00000486085 SMARCA2P51531 1590 aa8.29□□□□□ -1.08
RTN4-214ENST00000486085 MROH2BQ7Z745 1585 aa8.28□□□□□ -1.08
RTN4-214ENST00000486085 NCAPD3P42695 1498 aa8.28□□□□□ -1.08
RTN4-214ENST00000486085 ETV2O00321 342 aaPredicted RBP8.28□□□□□ -1.08
RTN4-214ENST00000486085 MMEP08473 750 aa8.28□□□□□ -1.08
RTN4-214ENST00000486085 PTX3P26022 381 aaPredicted RBP8.28□□□□□ -1.08
RTN4-214ENST00000486085 DBPQ10586 325 aaPredicted RBP8.28□□□□□ -1.08
RTN4-214ENST00000486085 FAM50AQ14320 339 aaKnown RBP8.28□□□□□ -1.08
RTN4-214ENST00000486085 CATSPEREQ5SY80 951 aa8.28□□□□□ -1.08
RTN4-214ENST00000486085 TMC5Q6UXY8 1006 aa8.28□□□□□ -1.08
RTN4-214ENST00000486085 STK32CQ86UX6 486 aa8.28□□□□□ -1.08
RTN4-214ENST00000486085 ANKRD13AQ8IZ07 590 aa8.28□□□□□ -1.08
RTN4-214ENST00000486085 ERCC4Q92889 916 aaPredicted RBP8.28□□□□□ -1.08
RTN4-214ENST00000486085 RASSF10A6NK89 507 aa8.27□□□□□ -1.09
RTN4-214ENST00000486085 PPM1GO15355 546 aaPredicted RBP8.27□□□□□ -1.09
RTN4-214ENST00000486085 GPR39O43194 453 aa8.27□□□□□ -1.09
RTN4-214ENST00000486085 CYP17A1P05093 508 aa8.27□□□□□ -1.09
RTN4-214ENST00000486085 TMEM253P0C7T8 217 aa8.27□□□□□ -1.09
RTN4-214ENST00000486085 CYP2C8P10632 490 aa8.27□□□□□ -1.09
RTN4-214ENST00000486085 SDHAP31040 664 aa8.27□□□□□ -1.09
RTN4-214ENST00000486085 FOXO4P98177 505 aa8.27□□□□□ -1.09
RTN4-214ENST00000486085 MESP2Q0VG99 397 aa8.27□□□□□ -1.09
RTN4-214ENST00000486085 RNF219Q5W0B1 726 aaPredicted RBP8.27□□□□□ -1.09
RTN4-214ENST00000486085 CD276Q5ZPR3 534 aa8.27□□□□□ -1.09
RTN4-214ENST00000486085 RPUSD2Q8IZ73 545 aaKnown RBP8.27□□□□□ -1.09
RTN4-214ENST00000486085 GBP4Q96PP9 640 aa8.27□□□□□ -1.09
RTN4-214ENST00000486085 ARHGAP28Q9P2N2 729 aa8.27□□□□□ -1.09
RTN4-214ENST00000486085 RNF114Q9Y508 228 aa8.27□□□□□ -1.09
RTN4-214ENST00000486085 HMGXB3Q12766 1538 aa8.27□□□□□ -1.09
RTN4-214ENST00000486085 ATAD2BQ9ULI0 1458 aa8.26□□□□□ -1.09
RTN4-214ENST00000486085 ENO2P09104 434 aaPredicted RBP8.26□□□□□ -1.09
RTN4-214ENST00000486085 IGFBP6P24592 240 aaPredicted RBP8.26□□□□□ -1.09
RTN4-214ENST00000486085 LIMS1P48059 325 aa8.26□□□□□ -1.09
RTN4-214ENST00000486085 HERVK_113P62684 666 aa8.26□□□□□ -1.09
RTN4-214ENST00000486085 VASNQ6EMK4 673 aa8.26□□□□□ -1.09
RTN4-214ENST00000486085 LIPIQ6XZB0 460 aa8.26□□□□□ -1.09
RTN4-214ENST00000486085 HDGFL2Q7Z4V5 671 aaPredicted RBP8.26□□□□□ -1.09
RTN4-214ENST00000486085 B3GNT8Q7Z7M8 397 aa8.26□□□□□ -1.09
RTN4-214ENST00000486085 PROSER1Q86XN7 944 aa8.26□□□□□ -1.09
RTN4-214ENST00000486085 HIPK4Q8NE63 616 aa8.26□□□□□ -1.09
RTN4-214ENST00000486085 ASB15Q8WXK1 588 aa8.26□□□□□ -1.09
RTN4-214ENST00000486085 SCYL1Q96KG9 808 aa8.26□□□□□ -1.09
RTN4-214ENST00000486085 FAM84AQ96KN4 292 aa8.26□□□□□ -1.09
RTN4-214ENST00000486085 PUS7Q96PZ0 661 aaKnown RBP8.26□□□□□ -1.09
RTN4-214ENST00000486085 SLC39A2Q9NP94 309 aa8.26□□□□□ -1.09
RTN4-214ENST00000486085 HSPBP1Q9NZL4 362 aa8.26□□□□□ -1.09
RTN4-214ENST00000486085 WASF3Q9UPY6 502 aa8.26□□□□□ -1.09
RTN4-214ENST00000486085 PHLDB1Q86UU1 1377 aa8.25□□□□□ -1.09
RTN4-214ENST00000486085 PRAMEF22A3QJZ6 481 aa8.25□□□□□ -1.09
RTN4-214ENST00000486085 FARP2O94887 1054 aaPredicted RBP8.25□□□□□ -1.09
RTN4-214ENST00000486085 SMAD3P84022 425 aaKnown RBP8.25□□□□□ -1.09
RTN4-214ENST00000486085 PFKPQ01813 784 aa8.25□□□□□ -1.09
RTN4-214ENST00000486085 SMAD2Q15796 467 aaKnown RBP8.25□□□□□ -1.09
RTN4-214ENST00000486085 DDB1Q16531 1140 aa8.25□□□□□ -1.09
RTN4-214ENST00000486085 BROXQ5VW32 411 aa8.25□□□□□ -1.09
RTN4-214ENST00000486085 PRAMEF18Q5VWM3 479 aa8.25□□□□□ -1.09
RTN4-214ENST00000486085 SPATS2Q86XZ4 545 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms