RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 ZBTB21Q9ULJ3 1066 aa8.13□□□□□ -1.11
SMC4-217ENST00000485867 HIF3AQ9Y2N7 669 aa8.13□□□□□ -1.11
SMC4-217ENST00000485867 GTF3C3Q9Y5Q9 886 aa8.13□□□□□ -1.11
SMC4-217ENST00000485867 MYH1P12882 1939 aa8.13□□□□□ -1.11
SMC4-217ENST00000485867 PDS5AQ29RF7 1337 aaKnown RBP8.12□□□□□ -1.11
SMC4-217ENST00000485867 A0A1W2PQ45 241 aaPredicted RBP8.12□□□□□ -1.11
SMC4-217ENST00000485867 A0A1W2PQY0 241 aa8.12□□□□□ -1.11
SMC4-217ENST00000485867 CARNS1A5YM72 827 aa8.12□□□□□ -1.11
SMC4-217ENST00000485867 MAP4K4O95819 1239 aaPredicted RBP8.12□□□□□ -1.11
SMC4-217ENST00000485867 TIMP1P01033 207 aa8.12□□□□□ -1.11
SMC4-217ENST00000485867 ADORA2AP29274 412 aa8.12□□□□□ -1.11
SMC4-217ENST00000485867 MECOMQ03112 1051 aa8.12□□□□□ -1.11
SMC4-217ENST00000485867 AAMPQ13685 434 aa8.12□□□□□ -1.11
SMC4-217ENST00000485867 IKBKEQ14164 716 aa8.12□□□□□ -1.11
SMC4-217ENST00000485867 PRAMEF19Q5SWL8 479 aa8.12□□□□□ -1.11
SMC4-217ENST00000485867 SPTY2D1Q68D10 685 aaPredicted RBP8.12□□□□□ -1.11
SMC4-217ENST00000485867 FDX2Q6P4F2 183 aa8.12□□□□□ -1.11
SMC4-217ENST00000485867 LBX2Q6XYB7 198 aa8.12□□□□□ -1.11
SMC4-217ENST00000485867 BEND4Q6ZU67 534 aa8.12□□□□□ -1.11
SMC4-217ENST00000485867 ANKRD33Q7Z3H0 272 aa8.12□□□□□ -1.11
SMC4-217ENST00000485867 DPP9Q86TI2 863 aa8.12□□□□□ -1.11
SMC4-217ENST00000485867 GJD3Q8N144 294 aa8.12□□□□□ -1.11
SMC4-217ENST00000485867 C12orf42Q96LP6 360 aa8.12□□□□□ -1.11
SMC4-217ENST00000485867 TOX2Q96NM4 488 aa8.12□□□□□ -1.11
SMC4-217ENST00000485867 XPNPEP3Q9NQH7 507 aa8.12□□□□□ -1.11
SMC4-217ENST00000485867 LATS2Q9NRM7 1088 aa8.12□□□□□ -1.11
SMC4-217ENST00000485867 GINM1Q9NU53 330 aa8.12□□□□□ -1.11
SMC4-217ENST00000485867 MSRAQ9UJ68 235 aa8.12□□□□□ -1.11
SMC4-217ENST00000485867 YBX2Q9Y2T7 364 aaKnown RBP8.12□□□□□ -1.11
SMC4-217ENST00000485867 PARP14Q460N5 1801 aa8.12□□□□□ -1.11
SMC4-217ENST00000485867 TRANK1O15050 2925 aa8.12□□□□□ -1.11
SMC4-217ENST00000485867 ROBO3Q96MS0 1386 aa8.11□□□□□ -1.11
SMC4-217ENST00000485867 MYO5AQ9Y4I1 1855 aaKnown RBP8.11□□□□□ -1.11
SMC4-217ENST00000485867 DCDC2CA8MYV0 355 aa8.11□□□□□ -1.11
SMC4-217ENST00000485867 PGK1P00558 417 aa8.11□□□□□ -1.11
SMC4-217ENST00000485867 SPINK2P20155 84 aa8.11□□□□□ -1.11
SMC4-217ENST00000485867 ADORA1P30542 326 aa8.11□□□□□ -1.11
SMC4-217ENST00000485867 EXOSC9Q06265 439 aaKnown RBP8.11□□□□□ -1.11
SMC4-217ENST00000485867 ZYXQ15942 572 aaKnown RBP8.11□□□□□ -1.11
SMC4-217ENST00000485867 MCTP1Q6DN14 999 aa8.11□□□□□ -1.11
SMC4-217ENST00000485867 MFSD5Q6N075 450 aa8.11□□□□□ -1.11
SMC4-217ENST00000485867 PSRC1Q6PGN9 363 aaPredicted RBP8.11□□□□□ -1.11
SMC4-217ENST00000485867 CCDC174Q6PII3 467 aa8.11□□□□□ -1.11
SMC4-217ENST00000485867 CATSPERGQ6ZRH7 1159 aa8.11□□□□□ -1.11
SMC4-217ENST00000485867 ZNF365Q70YC5 407 aa8.11□□□□□ -1.11
SMC4-217ENST00000485867 ERICH6Q7L0X2 663 aa8.11□□□□□ -1.11
SMC4-217ENST00000485867 METTL16Q86W50 562 aaKnown RBP8.11□□□□□ -1.11
SMC4-217ENST00000485867 TEX11Q8IYF3 940 aa8.11□□□□□ -1.11
SMC4-217ENST00000485867 HERVK_113Q902F9 699 aa8.11□□□□□ -1.11
SMC4-217ENST00000485867 TMPRSS13Q9BYE2 586 aa8.11□□□□□ -1.11
SMC4-217ENST00000485867 KCNF1Q9H3M0 494 aa8.11□□□□□ -1.11
SMC4-217ENST00000485867 SOX17Q9H6I2 414 aaPredicted RBP8.11□□□□□ -1.11
SMC4-217ENST00000485867 PI4KBQ9UBF8 816 aa8.11□□□□□ -1.11
SMC4-217ENST00000485867 MTMR7Q9Y216 660 aa8.11□□□□□ -1.11
SMC4-217ENST00000485867 COL11A1P12107 1806 aaPredicted RBP8.1□□□□□ -1.11
SMC4-217ENST00000485867 MCM3APO60318 1980 aa8.1□□□□□ -1.11
SMC4-217ENST00000485867 PI4K2BG5E9Z4 385 aa8.1□□□□□ -1.11
SMC4-217ENST00000485867 SMIM22K7EJ46 135 aa8.1□□□□□ -1.11
SMC4-217ENST00000485867 ACRP10323 421 aa8.1□□□□□ -1.11
SMC4-217ENST00000485867 RARBP10826 455 aa8.1□□□□□ -1.11
SMC4-217ENST00000485867 CSF2RAP15509 400 aa8.1□□□□□ -1.11
SMC4-217ENST00000485867 NHLH1Q02575 133 aa8.1□□□□□ -1.11
SMC4-217ENST00000485867 RNF180Q86T96 592 aa8.1□□□□□ -1.11
SMC4-217ENST00000485867 DHX36Q9H2U1 1008 aaKnown RBP8.1□□□□□ -1.11
SMC4-217ENST00000485867 SLC28A3Q9HAS3 691 aa8.1□□□□□ -1.11
SMC4-217ENST00000485867 ZNF521Q96K83 1311 aa8.09□□□□□ -1.11
SMC4-217ENST00000485867 COL4A4P53420 1690 aaPredicted RBP8.09□□□□□ -1.11
SMC4-217ENST00000485867 LOC100289279A0A1B0GTE1 492 aa8.09□□□□□ -1.11
SMC4-217ENST00000485867 PRR33A8MZF0 331 aa8.09□□□□□ -1.11
SMC4-217ENST00000485867 STRNO43815 780 aa8.09□□□□□ -1.11
SMC4-217ENST00000485867 ADAMTS4O75173 837 aa8.09□□□□□ -1.11
SMC4-217ENST00000485867 CIAO1O76071 339 aa8.09□□□□□ -1.11
SMC4-217ENST00000485867 TIAF1O95411 115 aa8.09□□□□□ -1.11
SMC4-217ENST00000485867 DLGAP3O95886 979 aa8.09□□□□□ -1.11
SMC4-217ENST00000485867 LDHCP07864 332 aa8.09□□□□□ -1.11
SMC4-217ENST00000485867 ESRRAP11474 423 aaPredicted RBP8.09□□□□□ -1.11
SMC4-217ENST00000485867 VCAM1P19320 739 aa8.09□□□□□ -1.11
SMC4-217ENST00000485867 GSTO1P78417 241 aa8.09□□□□□ -1.11
SMC4-217ENST00000485867 ZNF211Q13398 564 aaPredicted RBP8.09□□□□□ -1.11
SMC4-217ENST00000485867 SHKBP1Q8TBC3 707 aa8.09□□□□□ -1.11
SMC4-217ENST00000485867 SH3RF3Q8TEJ3 882 aaPredicted RBP8.09□□□□□ -1.11
SMC4-217ENST00000485867 NSUN4Q96CB9 384 aaKnown RBP8.09□□□□□ -1.11
SMC4-217ENST00000485867 MAML3Q96JK9 1138 aa8.09□□□□□ -1.11
SMC4-217ENST00000485867 FEZ1Q99689 392 aa8.09□□□□□ -1.11
SMC4-217ENST00000485867 MOV10L1Q9BXT6 1211 aaKnown RBP8.09□□□□□ -1.11
SMC4-217ENST00000485867 SIL1Q9H173 461 aa8.09□□□□□ -1.11
SMC4-217ENST00000485867 SUGCTQ9HAC7 445 aa8.09□□□□□ -1.11
SMC4-217ENST00000485867 CD320Q9NPF0 282 aa8.09□□□□□ -1.11
SMC4-217ENST00000485867 STARD7Q9NQZ5 370 aa8.09□□□□□ -1.11
SMC4-217ENST00000485867 COG5Q9UP83 839 aa8.09□□□□□ -1.11
SMC4-217ENST00000485867 MTCH2Q9Y6C9 303 aa8.09□□□□□ -1.11
SMC4-217ENST00000485867 ABL1P00519 1130 aa8.08□□□□□ -1.12
SMC4-217ENST00000485867 GH2P01242 217 aa8.08□□□□□ -1.12
SMC4-217ENST00000485867 ERCC3P19447 782 aa8.08□□□□□ -1.12
SMC4-217ENST00000485867 POU3F3P20264 500 aaPredicted RBP8.08□□□□□ -1.12
SMC4-217ENST00000485867 GRIK1P39086 918 aa8.08□□□□□ -1.12
SMC4-217ENST00000485867 ACLYP53396 1101 aa8.08□□□□□ -1.12
SMC4-217ENST00000485867 FOXP4Q8IVH2 680 aaPredicted RBP8.08□□□□□ -1.12
SMC4-217ENST00000485867 MAPKAPK5Q8IW41 473 aa8.08□□□□□ -1.12
SMC4-217ENST00000485867 CRACR2BQ8N4Y2 399 aaPredicted RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms