RNA–Protein interactions for RNA: ENST00000485790.1

SCAF4-206, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 2

Gene SCAF4, Length 1,282 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-206ENST00000485790 H3BNC9 293 aa15.69■□□□□ 0.1
SCAF4-206ENST00000485790 MEIS1O00470 390 aa15.69■□□□□ 0.1
SCAF4-206ENST00000485790 RB1P06400 928 aa15.69■□□□□ 0.1
SCAF4-206ENST00000485790 GHRP10912 638 aa15.69■□□□□ 0.1
SCAF4-206ENST00000485790 ACTR2P61160 394 aa15.69■□□□□ 0.1
SCAF4-206ENST00000485790 AKAP17AQ02040 695 aaKnown RBP15.69■□□□□ 0.1
SCAF4-206ENST00000485790 MKRN4PQ13434 485 aaPredicted RBP15.69■□□□□ 0.1
SCAF4-206ENST00000485790 SPRED2Q7Z698 418 aa15.69■□□□□ 0.1
SCAF4-206ENST00000485790 SQORQ9Y6N5 450 aa15.69■□□□□ 0.1
SCAF4-206ENST00000485790 SPTBN5Q9NRC6 3674 aaKnown RBP15.68■□□□□ 0.1
SCAF4-206ENST00000485790 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.68■□□□□ 0.1
SCAF4-206ENST00000485790 NCK2O43639 380 aa15.68■□□□□ 0.1
SCAF4-206ENST00000485790 MRPS6P82932 125 aaKnown RBP15.68■□□□□ 0.1
SCAF4-206ENST00000485790 LPIN1Q14693 890 aa15.68■□□□□ 0.1
SCAF4-206ENST00000485790 PUS10Q3MIT2 529 aaKnown RBP15.68■□□□□ 0.1
SCAF4-206ENST00000485790 FAM160B1Q5W0V3 765 aa15.68■□□□□ 0.1
SCAF4-206ENST00000485790 RUFY4Q6ZNE9 571 aa15.68■□□□□ 0.1
SCAF4-206ENST00000485790 NIPA1Q7RTP0 329 aa15.68■□□□□ 0.1
SCAF4-206ENST00000485790 RASEFQ8IZ41 740 aa15.68■□□□□ 0.1
SCAF4-206ENST00000485790 CYP2W1Q8TAV3 490 aa15.68■□□□□ 0.1
SCAF4-206ENST00000485790 FTHL17Q9BXU8 183 aa15.68■□□□□ 0.1
SCAF4-206ENST00000485790 AGO4Q9HCK5 861 aaKnown RBP15.68■□□□□ 0.1
SCAF4-206ENST00000485790 C6orf50Q9HD87 102 aa15.68■□□□□ 0.1
SCAF4-206ENST00000485790 RNF216Q9NWF9 866 aaPredicted RBP15.68■□□□□ 0.1
SCAF4-206ENST00000485790 PCDHA2Q9Y5H9 948 aa15.68■□□□□ 0.1
SCAF4-206ENST00000485790 MYO9BQ13459 2157 aa15.68■□□□□ 0.1
SCAF4-206ENST00000485790 POTEB3A0JP26 581 aa15.67■□□□□ 0.1
SCAF4-206ENST00000485790 BACH1O14867 736 aa15.67■□□□□ 0.1
SCAF4-206ENST00000485790 ARP10275 920 aa15.67■□□□□ 0.1
SCAF4-206ENST00000485790 PSMA5P28066 241 aa15.67■□□□□ 0.1
SCAF4-206ENST00000485790 GNA11P29992 359 aa15.67■□□□□ 0.1
SCAF4-206ENST00000485790 METAP2P50579 478 aaKnown RBP eCLIP15.67■□□□□ 0.1
SCAF4-206ENST00000485790 FUT2Q10981 343 aa15.67■□□□□ 0.1
SCAF4-206ENST00000485790 COL9A3Q14050 684 aaPredicted RBP15.67■□□□□ 0.1
SCAF4-206ENST00000485790 TIGD5Q53EQ6 642 aa15.67■□□□□ 0.1
SCAF4-206ENST00000485790 FBXO47Q5MNV8 452 aa15.67■□□□□ 0.1
SCAF4-206ENST00000485790 MARCH8Q5T0T0 291 aa15.67■□□□□ 0.1
SCAF4-206ENST00000485790 POTEBQ6S5H4 581 aa15.67■□□□□ 0.1
SCAF4-206ENST00000485790 TSHZ1Q6ZSZ6 1077 aa15.67■□□□□ 0.1
SCAF4-206ENST00000485790 BANK1Q8NDB2 785 aa15.67■□□□□ 0.1
SCAF4-206ENST00000485790 TCEANC2Q96MN5 208 aa15.67■□□□□ 0.1
SCAF4-206ENST00000485790 NECAB3Q96P71 396 aaPredicted RBP15.67■□□□□ 0.1
SCAF4-206ENST00000485790 ANO3Q9BYT9 981 aa15.67■□□□□ 0.1
SCAF4-206ENST00000485790 FAM49AQ9H0Q0 323 aaPredicted RBP15.67■□□□□ 0.1
SCAF4-206ENST00000485790 UBE2ZQ9H832 354 aaPredicted RBP15.67■□□□□ 0.1
SCAF4-206ENST00000485790 FAM50BQ9Y247 325 aa15.67■□□□□ 0.1
SCAF4-206ENST00000485790 CDY2AQ9Y6F7 541 aa15.67■□□□□ 0.1
SCAF4-206ENST00000485790 BDP1A6H8Y1 2624 aa15.67■□□□□ 0.1
SCAF4-206ENST00000485790 STXBP3O00186 592 aa15.66■□□□□ 0.1
SCAF4-206ENST00000485790 STAG3L1P0CL83 205 aa15.66■□□□□ 0.1
SCAF4-206ENST00000485790 COL9A1P20849 921 aa15.66■□□□□ 0.1
SCAF4-206ENST00000485790 ADD1P35611 737 aaKnown RBP15.66■□□□□ 0.1
SCAF4-206ENST00000485790 BMPR1AP36894 532 aa15.66■□□□□ 0.1
SCAF4-206ENST00000485790 SREBF1P36956 1147 aa15.66■□□□□ 0.1
SCAF4-206ENST00000485790 PFKFB3Q16875 520 aaPredicted RBP15.66■□□□□ 0.1
SCAF4-206ENST00000485790 ADCK5Q3MIX3 580 aa15.66■□□□□ 0.1
SCAF4-206ENST00000485790 LEXMQ3ZCV2 418 aa15.66■□□□□ 0.1
SCAF4-206ENST00000485790 ODR4Q5SWX8 454 aa15.66■□□□□ 0.1
SCAF4-206ENST00000485790 MIS18BP1Q6P0N0 1132 aa15.66■□□□□ 0.1
SCAF4-206ENST00000485790 BICD2Q8TD16 824 aa15.66■□□□□ 0.1
SCAF4-206ENST00000485790 C11orf84Q9BUA3 381 aaPredicted RBP15.66■□□□□ 0.1
SCAF4-206ENST00000485790 OSBPL7Q9BZF2 842 aa15.66■□□□□ 0.1
SCAF4-206ENST00000485790 TBC1D22BQ9NU19 505 aa15.66■□□□□ 0.1
SCAF4-206ENST00000485790 TCEAL9Q9UHQ7 104 aa15.66■□□□□ 0.1
SCAF4-206ENST00000485790 KIAA1217Q5T5P2 1943 aa15.65■□□□□ 0.1
SCAF4-206ENST00000485790 SMIM35A0A1B0GVV1 85 aa15.65■□□□□ 0.1
SCAF4-206ENST00000485790 HBP1O60381 514 aa15.65■□□□□ 0.1
SCAF4-206ENST00000485790 ATG7O95352 703 aa15.65■□□□□ 0.1
SCAF4-206ENST00000485790 SCG2P13521 617 aa15.65■□□□□ 0.1
SCAF4-206ENST00000485790 KCNA5P22460 613 aa15.65■□□□□ 0.1
SCAF4-206ENST00000485790 MGAT3Q09327 533 aa15.65■□□□□ 0.1
SCAF4-206ENST00000485790 BTG3Q14201 252 aaPredicted RBP15.65■□□□□ 0.1
SCAF4-206ENST00000485790 PLCB4Q15147 1175 aa15.65■□□□□ 0.1
SCAF4-206ENST00000485790 JAKMIP3Q5VZ66 844 aa15.65■□□□□ 0.1
SCAF4-206ENST00000485790 BLOC1S2Q6QNY1 142 aa15.65■□□□□ 0.1
SCAF4-206ENST00000485790 Q6ZUG5 572 aa15.65■□□□□ 0.1
SCAF4-206ENST00000485790 PLA2G4DQ86XP0 818 aa15.65■□□□□ 0.1
SCAF4-206ENST00000485790 PCYT2Q99447 389 aa15.65■□□□□ 0.1
SCAF4-206ENST00000485790 CELF4Q9BZC1 486 aaKnown RBP15.65■□□□□ 0.1
SCAF4-206ENST00000485790 LMAN2LQ9H0V9 348 aa15.65■□□□□ 0.1
SCAF4-206ENST00000485790 TRPV2Q9Y5S1 764 aa15.65■□□□□ 0.1
SCAF4-206ENST00000485790 CNTNAP5Q8WYK1 1306 aa15.65■□□□□ 0.1
SCAF4-206ENST00000485790 BAZ2BQ9UIF8 2168 aaKnown RBP15.65■□□□□ 0.1
SCAF4-206ENST00000485790 PRPF3O43395 683 aaKnown RBP15.64■□□□□ 0.09
SCAF4-206ENST00000485790 REC8O95072 547 aa15.64■□□□□ 0.09
SCAF4-206ENST00000485790 CYP3A4P08684 503 aa15.64■□□□□ 0.09
SCAF4-206ENST00000485790 KLRC1P26715 233 aa15.64■□□□□ 0.09
SCAF4-206ENST00000485790 CDC27P30260 824 aa15.64■□□□□ 0.09
SCAF4-206ENST00000485790 CTNNB1P35222 781 aa15.64■□□□□ 0.09
SCAF4-206ENST00000485790 KRT76Q01546 638 aa15.64■□□□□ 0.09
SCAF4-206ENST00000485790 PAK2Q13177 524 aa15.64■□□□□ 0.09
SCAF4-206ENST00000485790 ITGB3BPQ13352 177 aaPredicted RBP15.64■□□□□ 0.09
SCAF4-206ENST00000485790 SCN5AQ14524 2016 aa15.64■□□□□ 0.09
SCAF4-206ENST00000485790 ZNF484Q5JVG2 852 aa15.64■□□□□ 0.09
SCAF4-206ENST00000485790 TYW1BQ6NUM6 668 aa15.64■□□□□ 0.09
SCAF4-206ENST00000485790 MTHFD1LQ6UB35 978 aa15.64■□□□□ 0.09
SCAF4-206ENST00000485790 EP400NLQ6ZTU2 488 aa15.64■□□□□ 0.09
SCAF4-206ENST00000485790 CKAP2LQ8IYA6 745 aa15.64■□□□□ 0.09
SCAF4-206ENST00000485790 CCDC136Q96JN2 1154 aa15.64■□□□□ 0.09
SCAF4-206ENST00000485790 PGBD1Q96JS3 809 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms