RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 ATP6V1DQ9Y5K8 247 aa22.41■■□□□ 1.18
COL6A2-208ENST00000485591 TCHHQ07283 1943 aa22.41■■□□□ 1.18
COL6A2-208ENST00000485591 GRIN2DO15399 1336 aa22.4■■□□□ 1.18
COL6A2-208ENST00000485591 POTEMA6NI47 508 aa22.4■■□□□ 1.18
COL6A2-208ENST00000485591 ITGA7Q13683 1181 aa22.4■■□□□ 1.18
COL6A2-208ENST00000485591 EPHA7Q15375 998 aa22.4■■□□□ 1.18
COL6A2-208ENST00000485591 KIAA0753Q2KHM9 967 aa22.4■■□□□ 1.18
COL6A2-208ENST00000485591 SWSAP1Q6NVH7 229 aa22.4■■□□□ 1.18
COL6A2-208ENST00000485591 SLC39A5Q6ZMH5 540 aa22.4■■□□□ 1.18
COL6A2-208ENST00000485591 DTHD1Q6ZMT9 781 aa22.4■■□□□ 1.18
COL6A2-208ENST00000485591 IGSF22Q8N9C0 903 aa22.4■■□□□ 1.18
COL6A2-208ENST00000485591 SLC43A3Q8NBI5 491 aa22.4■■□□□ 1.18
COL6A2-208ENST00000485591 VTI1AQ96AJ9 217 aa22.4■■□□□ 1.18
COL6A2-208ENST00000485591 SEZ6LQ9BYH1 1024 aa22.4■■□□□ 1.18
COL6A2-208ENST00000485591 RAB34Q9BZG1 259 aa22.4■■□□□ 1.18
COL6A2-208ENST00000485591 GABBR1Q9UBS5 961 aa22.4■■□□□ 1.18
COL6A2-208ENST00000485591 MAFBQ9Y5Q3 323 aaPredicted RBP22.4■■□□□ 1.18
COL6A2-208ENST00000485591 CEBPZQ03701 1054 aaKnown RBP22.39■■□□□ 1.17
COL6A2-208ENST00000485591 PDIA5Q14554 519 aa22.39■■□□□ 1.17
COL6A2-208ENST00000485591 IL17AQ16552 155 aa22.39■■□□□ 1.17
COL6A2-208ENST00000485591 NBPF20Q3BBV1 942 aa22.39■■□□□ 1.17
COL6A2-208ENST00000485591 FOXD4L6Q3SYB3 417 aaPredicted RBP22.39■■□□□ 1.17
COL6A2-208ENST00000485591 NFRKBQ6P4R8 1299 aa22.39■■□□□ 1.17
COL6A2-208ENST00000485591 FOXD4L3Q6VB84 417 aaPredicted RBP22.39■■□□□ 1.17
COL6A2-208ENST00000485591 KAT6AQ92794 2004 aa22.39■■□□□ 1.17
COL6A2-208ENST00000485591 ARVCFO00192 962 aa22.38■■□□□ 1.17
COL6A2-208ENST00000485591 YEATS4O95619 227 aa22.38■■□□□ 1.17
COL6A2-208ENST00000485591 DNM1Q05193 864 aaKnown RBP22.38■■□□□ 1.17
COL6A2-208ENST00000485591 PTPN11Q06124 597 aaPredicted RBP22.38■■□□□ 1.17
COL6A2-208ENST00000485591 SLC39A14Q15043 492 aa22.38■■□□□ 1.17
COL6A2-208ENST00000485591 PDXDC2PQ6P474 469 aa22.38■■□□□ 1.17
COL6A2-208ENST00000485591 SESTD1Q86VW0 696 aa22.38■■□□□ 1.17
COL6A2-208ENST00000485591 NEK9Q8TD19 979 aa22.38■■□□□ 1.17
COL6A2-208ENST00000485591 ATP6V0A1Q93050 837 aa22.38■■□□□ 1.17
COL6A2-208ENST00000485591 TFIP11Q9UBB9 837 aaKnown RBP22.38■■□□□ 1.17
COL6A2-208ENST00000485591 CFAP45Q9UL16 551 aa22.38■■□□□ 1.17
COL6A2-208ENST00000485591 ARID2Q68CP9 1835 aa22.38■■□□□ 1.17
COL6A2-208ENST00000485591 VWA3AA6NCI4 1184 aa22.37■■□□□ 1.17
COL6A2-208ENST00000485591 MARK3P27448 753 aa22.37■■□□□ 1.17
COL6A2-208ENST00000485591 CDK7P50613 346 aa22.37■■□□□ 1.17
COL6A2-208ENST00000485591 ATN1P54259 1190 aaPredicted RBP22.37■■□□□ 1.17
COL6A2-208ENST00000485591 STK38Q15208 465 aa22.37■■□□□ 1.17
COL6A2-208ENST00000485591 UGCGQ16739 394 aa22.37■■□□□ 1.17
COL6A2-208ENST00000485591 LINC00301Q8NCQ3 95 aa22.37■■□□□ 1.17
COL6A2-208ENST00000485591 EIF2AK1Q9BQI3 630 aaKnown RBP22.37■■□□□ 1.17
COL6A2-208ENST00000485591 LRWD1Q9UFC0 647 aa22.37■■□□□ 1.17
COL6A2-208ENST00000485591 MROH7Q68CQ1 1323 aa22.36■■□□□ 1.17
COL6A2-208ENST00000485591 LOXHD1Q8IVV2 1947 aa22.36■■□□□ 1.17
COL6A2-208ENST00000485591 P4HBP07237 508 aaKnown RBP22.36■■□□□ 1.17
COL6A2-208ENST00000485591 QARSP47897 775 aaKnown RBP22.36■■□□□ 1.17
COL6A2-208ENST00000485591 CHMP4BP1P59074 171 aa22.36■■□□□ 1.17
COL6A2-208ENST00000485591 PSMC5P62195 406 aa22.36■■□□□ 1.17
COL6A2-208ENST00000485591 PLCB4Q15147 1175 aa22.36■■□□□ 1.17
COL6A2-208ENST00000485591 LRRC26Q2I0M4 334 aa22.36■■□□□ 1.17
COL6A2-208ENST00000485591 C7orf31Q8N865 590 aa22.36■■□□□ 1.17
COL6A2-208ENST00000485591 BANK1Q8NDB2 785 aa22.36■■□□□ 1.17
COL6A2-208ENST00000485591 ERMNQ8TAM6 284 aa22.36■■□□□ 1.17
COL6A2-208ENST00000485591 HSD17B14Q9BPX1 270 aa22.36■■□□□ 1.17
COL6A2-208ENST00000485591 HTATIP2Q9BUP3 242 aa22.36■■□□□ 1.17
COL6A2-208ENST00000485591 RNPEPQ9H4A4 650 aa22.36■■□□□ 1.17
COL6A2-208ENST00000485591 CHMP5Q9NZZ3 219 aa22.36■■□□□ 1.17
COL6A2-208ENST00000485591 FBXO2Q9UK22 296 aaPredicted RBP22.36■■□□□ 1.17
COL6A2-208ENST00000485591 STK24Q9Y6E0 443 aa22.36■■□□□ 1.17
COL6A2-208ENST00000485591 ZNF862O60290 1169 aa22.35■■□□□ 1.17
COL6A2-208ENST00000485591 DKC1O60832 514 aaKnown RBP eCLIP22.35■■□□□ 1.17
COL6A2-208ENST00000485591 SMIM10L2AP0DMW4 78 aa22.35■■□□□ 1.17
COL6A2-208ENST00000485591 SMIM10L2BP0DMW5 78 aa22.35■■□□□ 1.17
COL6A2-208ENST00000485591 ATP4AP20648 1035 aa22.35■■□□□ 1.17
COL6A2-208ENST00000485591 KRT85P78386 507 aa22.35■■□□□ 1.17
COL6A2-208ENST00000485591 FAM47CQ5HY64 1035 aa22.35■■□□□ 1.17
COL6A2-208ENST00000485591 HAUS3Q68CZ6 603 aa22.35■■□□□ 1.17
COL6A2-208ENST00000485591 ATP8B4Q8TF62 1192 aa22.35■■□□□ 1.17
COL6A2-208ENST00000485591 DYDC2Q96IM9 177 aa22.35■■□□□ 1.17
COL6A2-208ENST00000485591 FAM167AQ96KS9 214 aa22.35■■□□□ 1.17
COL6A2-208ENST00000485591 AK8Q96MA6 479 aa22.35■■□□□ 1.17
COL6A2-208ENST00000485591 LXNQ9BS40 222 aa22.35■■□□□ 1.17
COL6A2-208ENST00000485591 RGL1Q9NZL6 768 aa22.35■■□□□ 1.17
COL6A2-208ENST00000485591 HDAC6Q9UBN7 1215 aa22.35■■□□□ 1.17
COL6A2-208ENST00000485591 GTF2IRD1Q9UHL9 959 aa22.35■■□□□ 1.17
COL6A2-208ENST00000485591 TRIP12Q14669 1992 aaPredicted RBP22.34■■□□□ 1.17
COL6A2-208ENST00000485591 POTEB3A0JP26 581 aa22.34■■□□□ 1.17
COL6A2-208ENST00000485591 SPTLC2O15270 562 aa22.34■■□□□ 1.17
COL6A2-208ENST00000485591 PPP6R2O75170 966 aa22.34■■□□□ 1.17
COL6A2-208ENST00000485591 CAPN15O75808 1086 aa22.34■■□□□ 1.17
COL6A2-208ENST00000485591 SLITRK3O94933 977 aa22.34■■□□□ 1.17
COL6A2-208ENST00000485591 MARCKSP29966 332 aaPredicted RBP22.34■■□□□ 1.17
COL6A2-208ENST00000485591 HOXC8P31273 242 aa22.34■■□□□ 1.17
COL6A2-208ENST00000485591 LONP1P36776 959 aaKnown RBP22.34■■□□□ 1.17
COL6A2-208ENST00000485591 RGS19P49795 217 aa22.34■■□□□ 1.17
COL6A2-208ENST00000485591 RTP1P59025 263 aa22.34■■□□□ 1.17
COL6A2-208ENST00000485591 PRKCEQ02156 737 aa22.34■■□□□ 1.17
COL6A2-208ENST00000485591 CYP4A11Q02928 519 aa22.34■■□□□ 1.17
COL6A2-208ENST00000485591 TRIM60Q495X7 471 aa22.34■■□□□ 1.17
COL6A2-208ENST00000485591 POTEBQ6S5H4 581 aa22.34■■□□□ 1.17
COL6A2-208ENST00000485591 ANKRD33Q7Z3H0 272 aa22.34■■□□□ 1.17
COL6A2-208ENST00000485591 CKAP2LQ8IYA6 745 aa22.34■■□□□ 1.17
COL6A2-208ENST00000485591 PPP1R13LQ8WUF5 828 aa22.34■■□□□ 1.17
COL6A2-208ENST00000485591 BBXQ8WY36 941 aaPredicted RBP22.34■■□□□ 1.17
COL6A2-208ENST00000485591 TNPO1Q92973 898 aaKnown RBP22.34■■□□□ 1.17
COL6A2-208ENST00000485591 POLR3CQ9BUI4 534 aaPredicted RBP22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms