RNA–Protein interactions for RNA: ENST00000485248.2

CAPN13-206, Transcript of calpain 13, humanhuman

TSL 3

Gene CAPN13, Length 710 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-206ENST00000485248 DNAJB1P25685 340 aa7.44□□□□□ -1.22
CAPN13-206ENST00000485248 ZAP70P43403 619 aa7.44□□□□□ -1.22
CAPN13-206ENST00000485248 RBM10P98175 930 aaKnown RBP7.44□□□□□ -1.22
CAPN13-206ENST00000485248 CAMK1Q14012 370 aa7.44□□□□□ -1.22
CAPN13-206ENST00000485248 BMS1Q14692 1282 aaKnown RBP7.44□□□□□ -1.22
CAPN13-206ENST00000485248 PAN2Q504Q3 1202 aaKnown RBP7.44□□□□□ -1.22
CAPN13-206ENST00000485248 PLPP4Q5VZY2 271 aa7.44□□□□□ -1.22
CAPN13-206ENST00000485248 OTOP3Q7RTS5 596 aa7.44□□□□□ -1.22
CAPN13-206ENST00000485248 SIAH1Q8IUQ4 282 aa7.44□□□□□ -1.22
CAPN13-206ENST00000485248 THNSL1Q8IYQ7 743 aa7.44□□□□□ -1.22
CAPN13-206ENST00000485248 CMTR2Q8IYT2 770 aaKnown RBP7.44□□□□□ -1.22
CAPN13-206ENST00000485248 KDF1Q8NAX2 398 aaPredicted RBP7.44□□□□□ -1.22
CAPN13-206ENST00000485248 AFG1LQ8WV93 481 aa7.44□□□□□ -1.22
CAPN13-206ENST00000485248 ZCCHC14Q8WYQ9 949 aaKnown RBP7.44□□□□□ -1.22
CAPN13-206ENST00000485248 BCO2Q9BYV7 579 aa7.44□□□□□ -1.22
CAPN13-206ENST00000485248 S1PR5Q9H228 398 aa7.44□□□□□ -1.22
CAPN13-206ENST00000485248 WNT16Q9UBV4 365 aa7.44□□□□□ -1.22
CAPN13-206ENST00000485248 FBXO4Q9UKT5 387 aa7.44□□□□□ -1.22
CAPN13-206ENST00000485248 BRPF3Q9ULD4 1205 aa7.44□□□□□ -1.22
CAPN13-206ENST00000485248 LRFN2Q9ULH4 789 aa7.44□□□□□ -1.22
CAPN13-206ENST00000485248 MRPL42Q9Y6G3 142 aaKnown RBP7.44□□□□□ -1.22
CAPN13-206ENST00000485248 SETXQ7Z333 2677 aaKnown RBP7.44□□□□□ -1.22
CAPN13-206ENST00000485248 KIAA1671Q9BY89 1806 aa7.43□□□□□ -1.22
CAPN13-206ENST00000485248 MYO5AQ9Y4I1 1855 aaKnown RBP7.43□□□□□ -1.22
CAPN13-206ENST00000485248 RBM47A0AV96 593 aaKnown RBP7.43□□□□□ -1.22
CAPN13-206ENST00000485248 C17orf102A2RUQ5 167 aa7.43□□□□□ -1.22
CAPN13-206ENST00000485248 SRRM3A6NNA2 597 aaPredicted RBP7.43□□□□□ -1.22
CAPN13-206ENST00000485248 TAF4O00268 1085 aa7.43□□□□□ -1.22
CAPN13-206ENST00000485248 SRGAP3O43295 1099 aa7.43□□□□□ -1.22
CAPN13-206ENST00000485248 LRP3O75074 770 aa7.43□□□□□ -1.22
CAPN13-206ENST00000485248 EOMESO95936 686 aa7.43□□□□□ -1.22
CAPN13-206ENST00000485248 CDK8P49336 464 aa7.43□□□□□ -1.22
CAPN13-206ENST00000485248 CSTF1Q05048 431 aaKnown RBP7.43□□□□□ -1.22
CAPN13-206ENST00000485248 OS9Q13438 667 aaPredicted RBP7.43□□□□□ -1.22
CAPN13-206ENST00000485248 AASDHQ4L235 1098 aaPredicted RBP7.43□□□□□ -1.22
CAPN13-206ENST00000485248 TMEM184AQ6ZMB5 413 aa7.43□□□□□ -1.22
CAPN13-206ENST00000485248 CCDC149Q6ZUS6 474 aa7.43□□□□□ -1.22
CAPN13-206ENST00000485248 SND1Q7KZF4 910 aaKnown RBP eCLIP7.43□□□□□ -1.22
CAPN13-206ENST00000485248 FAM160B2Q86V87 743 aa7.43□□□□□ -1.22
CAPN13-206ENST00000485248 VN1R2Q8NFZ6 395 aa7.43□□□□□ -1.22
CAPN13-206ENST00000485248 MORC4Q8TE76 937 aa7.43□□□□□ -1.22
CAPN13-206ENST00000485248 CHURC1Q8WUH1 139 aa7.43□□□□□ -1.22
CAPN13-206ENST00000485248 SDR42E1Q8WUS8 393 aa7.43□□□□□ -1.22
CAPN13-206ENST00000485248 COPS5Q92905 334 aa7.43□□□□□ -1.22
CAPN13-206ENST00000485248 ATP6V0A1Q93050 837 aa7.43□□□□□ -1.22
CAPN13-206ENST00000485248 CTAGE1Q96RT6 745 aa7.43□□□□□ -1.22
CAPN13-206ENST00000485248 EPC1Q9H2F5 836 aa7.43□□□□□ -1.22
CAPN13-206ENST00000485248 PIH1D3Q9NQM4 214 aaKnown RBP7.43□□□□□ -1.22
CAPN13-206ENST00000485248 ZSCAN32Q9NX65 697 aa7.43□□□□□ -1.22
CAPN13-206ENST00000485248 IGSF9Q9P2J2 1179 aa7.43□□□□□ -1.22
CAPN13-206ENST00000485248 CCPG1Q9ULG6 757 aa7.43□□□□□ -1.22
CAPN13-206ENST00000485248 MYO10Q9HD67 2058 aa7.43□□□□□ -1.22
CAPN13-206ENST00000485248 RCCD1A6NED2 376 aa7.42□□□□□ -1.22
CAPN13-206ENST00000485248 TMEM232C9JQI7 657 aa7.42□□□□□ -1.22
CAPN13-206ENST00000485248 ZNF286BP0CG31 522 aa7.42□□□□□ -1.22
CAPN13-206ENST00000485248 GNAT1P11488 350 aa7.42□□□□□ -1.22
CAPN13-206ENST00000485248 BMP3P12645 472 aa7.42□□□□□ -1.22
CAPN13-206ENST00000485248 CALML3P27482 149 aa7.42□□□□□ -1.22
CAPN13-206ENST00000485248 FOSBP53539 338 aa7.42□□□□□ -1.22
CAPN13-206ENST00000485248 PRSS12P56730 875 aa7.42□□□□□ -1.22
CAPN13-206ENST00000485248 PPP2R5DQ14738 602 aa7.42□□□□□ -1.22
CAPN13-206ENST00000485248 TRIM71Q2Q1W2 868 aaKnown RBP7.42□□□□□ -1.22
CAPN13-206ENST00000485248 RARS2Q5T160 578 aaKnown RBP7.42□□□□□ -1.22
CAPN13-206ENST00000485248 LAIR1Q6GTX8 287 aa7.42□□□□□ -1.22
CAPN13-206ENST00000485248 SYCE2Q6PIF2 218 aa7.42□□□□□ -1.22
CAPN13-206ENST00000485248 TRAF7Q6Q0C0 670 aa7.42□□□□□ -1.22
CAPN13-206ENST00000485248 PRR23CQ6ZRP0 262 aa7.42□□□□□ -1.22
CAPN13-206ENST00000485248 RPAP2Q8IXW5 612 aaPredicted RBP7.42□□□□□ -1.22
CAPN13-206ENST00000485248 C12orf50Q8NA57 414 aaPredicted RBP7.42□□□□□ -1.22
CAPN13-206ENST00000485248 RASGRP4Q8TDF6 673 aa7.42□□□□□ -1.22
CAPN13-206ENST00000485248 SHDQ96IW2 340 aa7.42□□□□□ -1.22
CAPN13-206ENST00000485248 TCF25Q9BQ70 676 aa7.42□□□□□ -1.22
CAPN13-206ENST00000485248 MKNK2Q9HBH9 465 aa7.42□□□□□ -1.22
CAPN13-206ENST00000485248 DCP1AQ9NPI6 582 aaPredicted RBP7.42□□□□□ -1.22
CAPN13-206ENST00000485248 TMEM260Q9NX78 707 aa7.42□□□□□ -1.22
CAPN13-206ENST00000485248 OTOGLQ3ZCN5 2332 aa7.42□□□□□ -1.22
CAPN13-206ENST00000485248 PLXNA4Q9HCM2 1894 aa7.42□□□□□ -1.22
CAPN13-206ENST00000485248 MYH4Q9Y623 1939 aa7.41□□□□□ -1.22
CAPN13-206ENST00000485248 DGKIO75912 1065 aa7.41□□□□□ -1.22
CAPN13-206ENST00000485248 LINC00271P0C7V0 271 aa7.41□□□□□ -1.22
CAPN13-206ENST00000485248 CYP2D6P10635 497 aa7.41□□□□□ -1.22
CAPN13-206ENST00000485248 IBSPP21815 317 aaPredicted RBP7.41□□□□□ -1.22
CAPN13-206ENST00000485248 VAC14Q08AM6 782 aa7.41□□□□□ -1.22
CAPN13-206ENST00000485248 BECN1Q14457 450 aa7.41□□□□□ -1.22
CAPN13-206ENST00000485248 KIAA1841Q6NSI8 718 aa7.41□□□□□ -1.22
CAPN13-206ENST00000485248 PHLDB3Q6NSJ2 640 aa7.41□□□□□ -1.22
CAPN13-206ENST00000485248 C16orf86Q6ZW13 317 aa7.41□□□□□ -1.22
CAPN13-206ENST00000485248 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.41□□□□□ -1.22
CAPN13-206ENST00000485248 SERINC5Q86VE9 423 aa7.41□□□□□ -1.22
CAPN13-206ENST00000485248 WNT8BQ93098 351 aa7.41□□□□□ -1.22
CAPN13-206ENST00000485248 ZNF689Q96CS4 500 aaPredicted RBP7.41□□□□□ -1.22
CAPN13-206ENST00000485248 ADAM33Q9BZ11 813 aa7.41□□□□□ -1.22
CAPN13-206ENST00000485248 ANTXR1Q9H6X2 564 aa7.41□□□□□ -1.22
CAPN13-206ENST00000485248 VRTNQ9H8Y1 702 aa7.41□□□□□ -1.22
CAPN13-206ENST00000485248 KCNK12Q9HB15 430 aa7.41□□□□□ -1.22
CAPN13-206ENST00000485248 NGRNQ9NPE2 291 aaKnown RBP7.41□□□□□ -1.22
CAPN13-206ENST00000485248 ARHGEF3Q9NR81 526 aa7.41□□□□□ -1.22
CAPN13-206ENST00000485248 DZANK1Q9NVP4 752 aa7.41□□□□□ -1.22
CAPN13-206ENST00000485248 NYAP2Q9P242 653 aa7.41□□□□□ -1.22
CAPN13-206ENST00000485248 CLIP2Q9UDT6 1046 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms